DK944142 [AcEST]

DK944142
Clone id	YMU02A01NGRL0005_B18
Library	YMU02
Length	374
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_B18. 5' end sequence.
Accession	DK944142
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	-
Sequence	AATAAAATTTATATTAAAAAAAAAAATAAAATTTTCTTATTATTTCGCCTCAACTATCGG TAAATTTTTTAATCTATTCTTTTGTTGCTTTGACGAACTAGGGAAGATAATAACGAAGTA GAATTTTTTTGGTACACCATGATATACATGATTTATTTTCTACTTCCCAATAAAAAAATA CAGAAGAAAATCTATGGTTATACATAAAACATAACTGAGTCATCATGACTTAACTTCAGA TAATAAATCTAGGAAAGAAAGTTGAAATAAATAAATACGGCTCTCTCAACATCATTTAAC ATCAATGTTGTTGAACTTTATCCCTCGTTTCGACAACTCGGTGATCATATATTTCCCTAA TGATTTTTTCCTGA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9XGC9
Definition	sp\|Q9XGC9\|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea mays
Align length	26
Score (bit)	29.6
E-value	4.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944142\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_B18, 5' (374 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9XGC9\|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea may... 30 4.9 >sp\|Q9XGC9\|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea mays GN=MUS1 PE=3 SV=1 Length = 942 Score = 29.6 bits (65), Expect = 4.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 372 RKKSLGKYMITELSKRGIKFNNIDVK 295 RKK G Y+I E K G+KF N +K Sbjct: 530 RKKLTGSYLIIETRKDGVKFTNSKLK 555
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944142\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_B18, 5' (374 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****