DK944143 |
Clone id |
YMU02A01NGRL0005_B19 |
Library |
YMU02 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_B19. 5' end sequence. |
Accession |
DK944143 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL7Contig3 |
Sequence |
GTGTGTGTGTGTGTGTGTAAGTGAGAGAGAGAGAGAGAGAGAGAGAGGAGATGACGATCA CAGTCCGACGGGCAGGCCACATGCACAGCTGCACGGCGCGGGTCCTGACGACCCTCTTCG AGAAGGAAGTCTCTGACTTCTACCTCCAGCATGTGGATCTTGCAAGCTCCGCTCACAAGC AGCCCGACTACCTTACCTTGCAGCCCTTTGGCGTCATACCGGTTGTCCAAGATGGCGATC TCACTCTCTTTGAATCAAGAGCTATAATAAGATACCTTGCTCTAAAATATGAGGGCCAAG GAAGCCCATTATATGGAAGAACACCAGAGGAAAGAGCCAAAGTGGAGCAATGGCTAGAAG TGGAATCACAAAACTTCCATGTGGCAGCCTCAACAATTGTGTATCACCTTGTGTCTCGTG CAAAGAAAGGGCTTGCCCCGGAAGAGGATGTGGTTAAGGCCACCATAGAAAAGCTAGAGT CTATTTTGGATGTATATGAGAAACAGTTGTCTAAGAGTCCTTTCTTAGCCGGGGACTTCT TTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P42761 |
Definition |
sp|P42761|GSTF3_ARATH Glutathione S-transferase ERD13 OS=Arabidopsis thaliana |
Align length |
153 |
Score (bit) |
144.0 |
E-value |
2.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944143|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_B19, 5' (544 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P42761|GSTF3_ARATH Glutathione S-transferase ERD13 OS=Arabido... 144 2e-34 sp|P04907|GSTF3_MAIZE Glutathione S-transferase 3 OS=Zea mays GN... 135 1e-31 sp|Q96266|GSTF6_ARATH Glutathione S-transferase 6, chloroplastic... 125 1e-28 sp|Q96324|GSTF7_ARATH Glutathione S-transferase OS=Arabidopsis t... 122 9e-28 sp|P46423|GSTF_HYOMU Glutathione S-transferase OS=Hyoscyamus mut... 122 1e-27 sp|P30109|GSTF1_TOBAC Glutathione S-transferase PARB OS=Nicotian... 119 1e-26 sp|P46440|GSTF2_TOBAC Glutathione S-transferase APIC OS=Nicotian... 119 1e-26 sp|O65857|GSTF1_ORYSJ Probable glutathione S-transferase GSTF1 O... 111 3e-24 sp|Q04522|GSTF_SILCU Glutathione S-transferase OS=Silene cucubal... 110 3e-24 sp|P46422|GSTF4_ARATH Glutathione S-transferase PM24 OS=Arabidop... 107 4e-23 sp|P12653|GSTF1_MAIZE Glutathione S-transferase 1 OS=Zea mays GN... 107 4e-23 sp|P30110|GSTF1_WHEAT Glutathione S-transferase 1 OS=Triticum ae... 106 6e-23 sp|Q9SLM6|GST16_ARATH Glutathione S-transferase 16 OS=Arabidopsi... 106 6e-23 sp|P42760|GSTF1_ARATH Glutathione S-transferase 1 OS=Arabidopsis... 105 2e-22 sp|Q9SRY5|GST11_ARATH Glutathione S-transferase 11 OS=Arabidopsi... 104 2e-22 sp|O82451|GSTF2_ORYSJ Probable glutathione S-transferase GSTF2 O... 102 9e-22 sp|P42769|GSTF5_ARATH Glutathione S-transferase PM239X14 OS=Arab... 100 5e-21 sp|P46420|GSTF4_MAIZE Glutathione S-transferase 4 OS=Zea mays GN... 99 2e-20 sp|P30111|GSTF2_WHEAT Glutathione S-transferase 2 OS=Triticum ae... 97 5e-20 sp|Q52828|GSTA_RHILE Protein gstA OS=Rhizobium leguminosarum GN=... 67 4e-11 sp|P46433|GSTT4_MUSDO Glutathione S-transferase 4 OS=Musca domes... 63 8e-10 sp|P0ACA9|YLIJ_SHIFL Uncharacterized GST-like protein yliJ OS=Sh... 60 9e-09 sp|P0ACA7|YLIJ_ECOLI Uncharacterized GST-like protein yliJ OS=Es... 60 9e-09 sp|P0ACA8|YLIJ_ECOL6 Uncharacterized GST-like protein yliJ OS=Es... 60 9e-09 sp|P46431|GSTT2_MUSDO Glutathione S-transferase 2 OS=Musca domes... 60 9e-09 sp|P42860|GSTT1_LUCCU Glutathione S-transferase 1-1 OS=Lucilia c... 60 9e-09 sp|P46432|GSTT3_MUSDO Glutathione S-transferase 3 OS=Musca domes... 59 2e-08 sp|Q93112|GST1C_ANOGA Glutathione S-transferase 1, isoform C OS=... 59 2e-08 sp|P28338|GSTT1_MUSDO Glutathione S-transferase 1 OS=Musca domes... 59 2e-08 sp|P43387|DCMA_METS1 Dichloromethane dehalogenase OS=Methylophil... 56 1e-07
>sp|P42761|GSTF3_ARATH Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3 Length = 215
Score = 144 bits (364), Expect = 2e-34 Identities = 74/153 (48%), Positives = 101/153 (66%) Frame = +3
Query: 81 MHSCTARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESR 260 + + + R + TL EK VS F +VDL +QP+YL +QPFG IPV+ DGD +FESR Sbjct: 9 LFASSKRAVVTLVEKGVS-FETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESR 67
Query: 261 AIIRYLALKYEGQGSPLYGRTPEERAKVEQWLEVESQNFHVAASTIVYHLVSRAKKGLAP 440 AI+RY+A KY QG L G+T EER +VEQWL+VE+ ++H + ++V G Sbjct: 68 AIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPA 127
Query: 441 EEDVVKATIEKLESILDVYEKQLSKSPFLAGDF 539 +E V+K + EKL +LDVYE QLSK+ +LAGDF Sbjct: 128 DEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDF 160
>sp|P04907|GSTF3_MAIZE Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4 Length = 222
Score = 135 bits (340), Expect = 1e-31 Identities = 76/148 (51%), Positives = 97/148 (65%) Frame = +3
Query: 99 RVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESRAIIRYL 278 RV T L EK + DF + VDL + AHKQPD+L L PFG IP + DGD LFESRAI RY+ Sbjct: 17 RVATVLNEKGL-DFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYI 75
Query: 279 ALKYEGQGSPLYGRTPEERAKVEQWLEVESQNFHVAASTIVYHLVSRAKKGLAPEEDVVK 458 A KY +G+ L T AK+E WLEVES +FH AS +V+ L+ R G AP+ VV+ Sbjct: 76 ASKYASEGTDLLPAT-ASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVE 134
Query: 459 ATIEKLESILDVYEKQLSKSPFLAGDFF 542 E+L +LDVYE L+++ +LAGD F Sbjct: 135 KHAEQLAKVLDVYEAHLARNKYLAGDEF 162
>sp|Q96266|GSTF6_ARATH Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3 Length = 263
Score = 125 bits (315), Expect = 1e-28 Identities = 70/155 (45%), Positives = 97/155 (62%), Gaps = 1/155 (0%) Frame = +3
Query: 81 MHSCTARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESR 260 M + T RVL TL+EK++ F L VD+ + AHKQ +L L PFG IP ++DGDLTLFESR Sbjct: 59 MSTATMRVLATLYEKDLQ-FELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESR 117
Query: 261 AIIRYLALKYEGQGSPLYGRTPEE-RAKVEQWLEVESQNFHVAASTIVYHLVSRAKKGLA 437 AI +YLA +Y +G L + ++ +A WL+VE Q F AS + + V + G+ Sbjct: 118 AITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMT 177
Query: 438 PEEDVVKATIEKLESILDVYEKQLSKSPFLAGDFF 542 + V+ KL+ +LDVYE +L+KS FLAGD F Sbjct: 178 TDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSF 212
>sp|Q96324|GSTF7_ARATH Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1 Length = 214
Score = 122 bits (307), Expect = 9e-28 Identities = 65/148 (43%), Positives = 93/148 (62%) Frame = +3
Query: 99 RVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESRAIIRYL 278 RVL EK++ +F + HVDL K+P +L QPFG +P ++DG L LFESRAI RY Sbjct: 16 RVLLCFLEKDI-EFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYY 74
Query: 279 ALKYEGQGSPLYGRTPEERAKVEQWLEVESQNFHVAASTIVYHLVSRAKKGLAPEEDVVK 458 A KY QG+ L G+T E RA V+QW+EVE+ F+ A +V ++V + K G + +V+ Sbjct: 75 ATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVE 134
Query: 459 ATIEKLESILDVYEKQLSKSPFLAGDFF 542 K + +LDVYE +L+ + +L GD F Sbjct: 135 ELKVKFDKVLDVYENRLATNRYLGGDEF 162
>sp|P46423|GSTF_HYOMU Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1 Length = 212
Score = 122 bits (305), Expect = 1e-27 Identities = 63/154 (40%), Positives = 92/154 (59%) Frame = +3
Query: 81 MHSCTARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESR 260 M RV+ TL EK++ DF L V++ + HK+ ++TL PFG +P +DGDL LFESR Sbjct: 10 MSPAVMRVIATLKEKDL-DFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESR 68
Query: 261 AIIRYLALKYEGQGSPLYGRTPEERAKVEQWLEVESQNFHVAASTIVYHLVSRAKKGLAP 440 AI +Y+A Y +G+ L P++ A + W+EVESQ F AS + + +V + G+ Sbjct: 69 AITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVT 128
Query: 441 EEDVVKATIEKLESILDVYEKQLSKSPFLAGDFF 542 ++ V EKL +LDVYE +L S +L GD F Sbjct: 129 DDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSF 162
>sp|P30109|GSTF1_TOBAC Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1 Length = 213
Score = 119 bits (298), Expect = 1e-26 Identities = 63/154 (40%), Positives = 91/154 (59%) Frame = +3
Query: 81 MHSCTARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESR 260 M + T RV L EKE+ DF VD+AS HK+ YL+L PFG +P +DGDL LFESR Sbjct: 10 MSTATMRVAACLIEKEL-DFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESR 68
Query: 261 AIIRYLALKYEGQGSPLYGRTPEERAKVEQWLEVESQNFHVAASTIVYHLVSRAKKGLAP 440 AI +Y+A Y G L + P++ + W+EVE Q F A+ + + L + G+ Sbjct: 69 AITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTT 128
Query: 441 EEDVVKATIEKLESILDVYEKQLSKSPFLAGDFF 542 ++ VK + +L +LD+YE QL++S +L GD F Sbjct: 129 DDAAVKESEAQLSKVLDIYETQLAESKYLGGDSF 162
>sp|P46440|GSTF2_TOBAC Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1 Length = 213
Score = 119 bits (297), Expect = 1e-26 Identities = 63/154 (40%), Positives = 92/154 (59%) Frame = +3
Query: 81 MHSCTARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESR 260 M + T RV L EK++ DF L VD+ S HK+ YL+L PFG +P +DGDL LFESR Sbjct: 10 MSTATMRVAACLIEKDL-DFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESR 68
Query: 261 AIIRYLALKYEGQGSPLYGRTPEERAKVEQWLEVESQNFHVAASTIVYHLVSRAKKGLAP 440 AI +Y+A Y G L + P++ + W+EVE Q F AS + + L + G+ Sbjct: 69 AITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTT 128
Query: 441 EEDVVKATIEKLESILDVYEKQLSKSPFLAGDFF 542 ++D VK + +L +LD+YE +L++S +L GD F Sbjct: 129 DDDAVKESEVQLSKVLDIYETRLAESKYLGGDSF 162
>sp|O65857|GSTF1_ORYSJ Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2 Length = 219
Score = 111 bits (277), Expect = 3e-24 Identities = 64/150 (42%), Positives = 94/150 (62%), Gaps = 2/150 (1%) Frame = +3
Query: 96 ARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLFESRAIIRY 275 ARVL L E+ +++ + +VD HK P++L PFG IP QDGDL LFESRAI +Y Sbjct: 16 ARVLLCL-EEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKY 74
Query: 276 LALKYEGQGSPLYGR-TPEERAKVEQWLEVESQNFHVAASTIVYH-LVSRAKKGLAPEED 449 + KY+ + + L E A V+ W EVE+ ++ A S IVY +++ A +G+ + Sbjct: 75 ILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQK 134
Query: 450 VVKATIEKLESILDVYEKQLSKSPFLAGDF 539 VV + EKL+ +L+VYE +LS+S +LAGDF Sbjct: 135 VVDESAEKLKKVLEVYEARLSQSTYLAGDF 164
>sp|Q04522|GSTF_SILCU Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3 Length = 217
Score = 110 bits (276), Expect = 3e-24 Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 4/166 (2%) Frame = +3
Query: 57 ITVRRAGHMHS-CTARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQD 233 +T++ G+ S T RVL L+EK + +F +D+ + HKQP YL L PFG +P ++D Sbjct: 1 MTIKVHGNPRSTATQRVLVALYEKHL-EFEFVPIDMGAGGHKQPSYLALNPFGQVPALED 59
Query: 234 GDLTLFESRAIIRYLALKYEGQ--GSPLYGRTPEERAKVEQWLEVESQNFHVAASTIVYH 407 G++ LFESRAI +YLA ++ Q G+ L + E A W EVE+ F AS + + Sbjct: 60 GEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWE 119
Query: 408 LVSRAKKGLAPEEDVVKATIEKLESILDVYEKQLSKSPFL-AGDFF 542 LV + G+ + VV+ KL +LDVYE +L++S +L A D F Sbjct: 120 LVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSF 165
>sp|P46422|GSTF4_ARATH Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3 Length = 212
Score = 107 bits (267), Expect = 4e-23 Identities = 64/160 (40%), Positives = 91/160 (56%), Gaps = 4/160 (2%) Frame = +3
Query: 75 GHMHS-CTARVLTTLFEKEVSDFYLQHVDLASSAHKQPDYLTLQPFGVIPVVQDGDLTLF 251 GH S T RVL L EK + DF L HV+L HK+ +L+ PFG +P +DGDL LF Sbjct: 8 GHPASIATRRVLIALHEKNL-DFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLF 66
Query: 252 ESRAIIRYLALKYEGQGSPLY---GRTPEERAKVEQWLEVESQNFHVAASTIVYHLVSRA 422 ESRAI +Y+A +YE QG+ L + + A + ++VE F AS + + + ++ Sbjct: 67 ESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKS 126
Query: 423 KKGLAPEEDVVKATIEKLESILDVYEKQLSKSPFLAGDFF 542 GL +E VV KL +LDVYE +L + +LAG+ F Sbjct: 127 IYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETF 166
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SCV0 |
Definition |
tr|A9SCV0|A9SCV0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
164 |
Score (bit) |
173.0 |
E-value |
6.0e-42 |
Report |
|