DK944151 [AcEST]

DK944151
Clone id	YMU02A01NGRL0005_C05
Library	YMU02
Length	190
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_C05. 5' end sequence.
Accession	DK944151
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	-
Sequence	GCCAGAAACCCTCTGGCTAAACTTTCTTAAAGCCAGGCAATTTAATTGGGATGGATGGCT GGCTTCCATTTTCCACTGGCGCCCAAAAAGGTTGGTCCTAAGAACTTTTGGGTCCCAACC ACTTTGGATACCTTAAGGAACCACTTCCCAGGGGTGGCTTCACTGCTTAAAAAAAAAAAA AAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q979N7
Definition	sp\|Q979N7\|TDXH_THEVO Probable peroxiredoxin OS=Thermoplasma volcanium
Align length	23
Score (bit)	28.9
E-value	8.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944151\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_C05, 5' (168 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q979N7\|TDXH_THEVO Probable peroxiredoxin OS=Thermoplasma volc... 29 8.4 >sp\|Q979N7\|TDXH_THEVO Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1 Length = 203 Score = 28.9 bits (63), Expect = 8.4 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 17 LNFLKARQFNWDGWLASIFHWRP 85 + +KA QFNWD LA+ +W+P Sbjct: 148 IRVIKALQFNWDRKLATPANWQP 170
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A9SJI8
Definition	tr\|A9SJI8\|A9SJI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length	44
Score (bit)	33.1
E-value	7.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944151\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_C05, 5' (168 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A9SJI8\|A9SJI8_PHYPA Predicted protein OS=Physcomitrella paten... 33 7.1 >tr\|A9SJI8\|A9SJI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_130937 PE=3 SV=1 Length = 230 Score = 33.1 bits (74), Expect = 7.1 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -3 Query: 166 AVKPPLGSGSLRYPKWLGPKSS*DQPFWAPVENGSQPSIPIKLP 35 A++P G+GS + + L P +S + W+P+ + +PI +P Sbjct: 105 ALQPASGTGSAQQSRSLSPSTSIEDQAWSPISSPMSSPLPISVP 148