DK944168
Clone id YMU02A01NGRL0005_D02
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_D02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCA
TGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAG
AGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCA
TGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGT
ATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCG
GCTTCCTTGTCCAGAAGCCCTCTGTCTAGACTTTCTTAAAGCAAGCCAATTTAGTTGGCA
TGAATGCCTGCTTCCCATTTCCCACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGT
GTCCCAGCCACTTTGCATACATAATGAAACAACTTCCCAGTGGTGGCTTCACTGCCCAAA
AAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 107
Score (bit) 157.0
E-value 2.0e-38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944168|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_D02, 5'
(477 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 157 2e-38
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 155 7e-38
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 155 1e-37
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 153 3e-37
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 153 4e-37
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 153 4e-37
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 153 4e-37
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 152 1e-36
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 152 1e-36
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 152 1e-36
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 152 1e-36
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 152 1e-36
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 151 2e-36
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 150 4e-36
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 150 4e-36
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai... 150 4e-36
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha... 150 4e-36
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha... 150 4e-36
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha... 150 4e-36
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha... 149 5e-36
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha... 149 5e-36
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 149 6e-36
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 149 6e-36
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha... 148 1e-35
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 148 1e-35
sp|P07398|RBS3_WHEAT Ribulose bisphosphate carboxylase small cha... 147 2e-35
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 147 2e-35
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 147 2e-35
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 147 2e-35
sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small cha... 147 3e-35

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 157 bits (398), Expect = 2e-38
Identities = 68/107 (63%), Positives = 84/107 (78%), Gaps = 1/107 (0%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 179
TLSYLPPLS E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLP
Sbjct: 71 TLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLP 130

Query: 180 MFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
MFGC D+A V++E+ EC KEYP AFIRV+GFD RQVQ F+V KP
Sbjct: 131 MFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 155 bits (393), Expect = 7e-38
Identities = 69/107 (64%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 179
TLSYLPPLSSEQ+AK+VD+++RK PC+EF+ + G VYREH GYYDGRYW MWKLP
Sbjct: 73 TLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLP 132

Query: 180 MFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
MFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+ F+ KP
Sbjct: 133 MFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 155 bits (391), Expect = 1e-37
Identities = 65/106 (61%), Positives = 83/106 (78%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ + GYYDGRYW MWKLPM
Sbjct: 70 TLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPM 129

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
FGC D++ VL+E+ EC+K YP+ F R++GFD RQVQ FL KP
Sbjct: 130 FGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
Length = 174

Score = 153 bits (387), Expect = 3e-37
Identities = 65/106 (61%), Positives = 81/106 (76%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPLS+E ++KQVD+++R W PC+EF K+G V+REH GYYDGRYW MWKLPM
Sbjct: 60 TLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 119

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
FGC DA VL E+ E KEYP+A++RV+GFD RQVQ F+ +P
Sbjct: 120 FGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 174

Score = 153 bits (386), Expect = 4e-37
Identities = 64/106 (60%), Positives = 80/106 (75%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPLS+E + KQVD+++R W PC+EF K+G ++REH GYYDGRYW MWKLPM
Sbjct: 60 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 119

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
FGC DA VL E+ E KEYP+A++R++GFD RQVQ F+ KP
Sbjct: 120 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
Length = 175

Score = 153 bits (386), Expect = 4e-37
Identities = 65/106 (61%), Positives = 80/106 (75%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPLS+E + KQVD+++R W PC+EF K+G V+REH GYYDGRYW MWKLPM
Sbjct: 61 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 120

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
FGC DA VL E+ E KEYP+A++RV+GFD RQVQ F+ +P
Sbjct: 121 FGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
Length = 180

Score = 153 bits (386), Expect = 4e-37
Identities = 66/108 (61%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKI-GSVYREHFHGSGYYDGRYWVMWKLP 179
TLSYLPPL+++Q+A+QVD+++ W PC+EF+ G VYREH + GYYDGRYW MWKLP
Sbjct: 71 TLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLP 130

Query: 180 MFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
MFGC D A VL E+ EC KEYP AFIR++GFD+ RQVQ F+ KP+
Sbjct: 131 MFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPA 178


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 152 bits (383), Expect = 1e-36
Identities = 66/107 (61%), Positives = 80/107 (74%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPLS E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPM
Sbjct: 71 TLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPM 130

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
FGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 131 FGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 152 bits (383), Expect = 1e-36
Identities = 66/107 (61%), Positives = 80/107 (74%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPLS E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPM
Sbjct: 71 TLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPM 130

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
FGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 131 FGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
Length = 177

Score = 152 bits (383), Expect = 1e-36
Identities = 66/107 (61%), Positives = 80/107 (74%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPLS E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPM
Sbjct: 71 TLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPM 130

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
FGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 131 FGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 107
Score (bit) 207.0
E-value 2.0e-52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944168|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_D02, 5'
(477 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 207 2e-52
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 160 4e-38
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 158 1e-37
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 158 1e-37
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 156 4e-37
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 156 4e-37
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 155 9e-37
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 155 9e-37
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 155 1e-36
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 155 1e-36
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c... 154 2e-36
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 154 2e-36
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c... 154 2e-36
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza... 154 2e-36
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c... 154 2e-36
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c... 154 3e-36
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c... 154 3e-36
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 154 3e-36
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c... 153 4e-36
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c... 153 5e-36
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 153 5e-36
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c... 152 6e-36
tr|Q9ZWG2|Q9ZWG2_BROCA Ribulose bisphosphate carboxylase small c... 152 6e-36

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 207 bits (527), Expect = 2e-52
Identities = 93/107 (86%), Positives = 103/107 (96%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPM
Sbjct: 67 TLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPM 126

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
FGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 127 FGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 160 bits (404), Expect = 4e-38
Identities = 68/107 (63%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 179
TLSYLPPLS E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLP
Sbjct: 71 TLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLP 130

Query: 180 MFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
MFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ F+V KP
Sbjct: 131 MFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 158 bits (399), Expect = 1e-37
Identities = 71/110 (64%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWK 173
T SYLPPL+ +QIAKQVDFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWK
Sbjct: 70 TFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWK 129

Query: 174 LPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
LPMFGC D+A VLREI EC + +P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 130 LPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 158 bits (399), Expect = 1e-37
Identities = 71/110 (64%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWK 173
T SYLPPL+ +QIAKQVDFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWK
Sbjct: 70 TFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWK 129

Query: 174 LPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
LPMFGC D+A VLREI EC + +P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 130 LPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 156 bits (395), Expect = 4e-37
Identities = 69/110 (62%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWK 173
T SYLPPL+ +QIAKQVD+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWK
Sbjct: 105 TFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWK 164

Query: 174 LPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
LPMFGC D++ VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 165 LPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 156 bits (395), Expect = 4e-37
Identities = 69/110 (62%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWK 173
T SYLPPL+ +QIAKQVD+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWK
Sbjct: 75 TFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWK 134

Query: 174 LPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
LPMFGC D++ VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 135 LPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 155 bits (392), Expect = 9e-37
Identities = 69/110 (62%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSG---YYDGRYWVMWK 173
T SYLPPLS +QIA+QVD+M+++ PCIEFD +G+V R +F GSG YYDGRYW MWK
Sbjct: 75 TFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWK 134

Query: 174 LPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
LPMFGC D++ VLREI EC YP ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 135 LPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
chain OS=Populus trichocarpa PE=2 SV=1
Length = 170

Score = 155 bits (392), Expect = 9e-37
Identities = 66/105 (62%), Positives = 82/105 (78%)
Frame = +3

Query: 6 LSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMF 185
LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV REH GYYDGRYW +WKLPMF
Sbjct: 64 LSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMF 123

Query: 186 GCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
GC D++ VL EI EC K YP+A+IR L FD K Q Q F++QKP
Sbjct: 124 GCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Triticum urartu GN=rbcS PE=3 SV=1
Length = 165

Score = 155 bits (391), Expect = 1e-36
Identities = 65/106 (61%), Positives = 81/106 (76%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPM 182
TLSYLPPLS+E + KQVD+++R W PC+EF K+G V+REH+ GYYDGRYW MWKLPM
Sbjct: 56 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHYSSPGYYDGRYWTMWKLPM 115

Query: 183 FGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 320
FGC DA VL E+ E KEYP+A++RV+GFD RQVQ F+ +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 161


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 155 bits (391), Expect = 1e-36
Identities = 68/110 (61%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Frame = +3

Query: 3 TLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWK 173
T SYLPPL+ ++IAKQVD+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWK
Sbjct: 74 TFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWK 133

Query: 174 LPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 323
LPMFGC D++ VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 134 LPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183