DK944170 |
Clone id |
YMU02A01NGRL0005_D04 |
Library |
YMU02 |
Length |
600 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_D04. 5' end sequence. |
Accession |
DK944170 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL705Contig1 |
Sequence |
AGCCGAGTAGAAAGCGGCAGCGAGAAAAGGCTCGTAGTGATCCAATGAAGTCCAAGAGGC CAGATCTGCCAGTAACAGGACCAGGCTTCGGAGGAAGAGTGGGTACGACAAAAGGCAGCC TTTTGACACAATATCTTCTTAAGGAAGGAGGTCTCATCAAGGAGACATGGATGGACGAAG ATCCTAGAGCAGCAATCCTAAAATATGCAGATGTCGCTGCGAAGGATCCCAAATACATTG CGCCTGCTTATGCAGAAACACAGCCAAAGACCATTTTTGCGTCTTCAGATGAGGAGGATG AGGAGAAGTGATAGGGATTCAACAAATTGAAGTTAGTGCTTTCCTGGAGCAAACCTTTTG CAGCTGCCCAAGCCTCAATCCAGGGGGAAGTTTGAGCTGGATGCACAACCTTAGCTGATT TTGGTCTAAGGAGGTTTACAACTATGTTTGGCTTCCCTTGAGAATAGAACAAATAGAGAT GTTTGCACCATCTCCATGTACAGCTTGTTATGCCATCTTCCTCCAGAAGGTGAGTTAGTG CAGTAGTTAATGAACTTCCTGAAATTGTGAAGTGAGGTTCTTAATAGTCTTTCCAGCTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9W1J3 |
Definition |
sp|Q9W1J3|GAD1_DROME Gastrulation defective protein 1 homolog OS=Drosophila melanogaster |
Align length |
92 |
Score (bit) |
96.3 |
E-value |
1.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV21 |
Definition |
tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
93 |
Score (bit) |
174.0 |
E-value |
3.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944170|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_D04, 5' (600 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea... 174 3e-42 tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella paten... 165 2e-39 tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subs... 163 8e-39 tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome... 163 8e-39 tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza... 163 8e-39 tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza... 163 8e-39 tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE... 162 2e-38 tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein (At2g20330/... 157 4e-37 tr|Q293F7|Q293F7_DROPS GA18958 OS=Drosophila pseudoobscura pseud... 99 2e-19 tr|B4GBL0|B4GBL0_DROPE GL11034 OS=Drosophila persimilis GN=GL110... 99 2e-19 tr|B3ME80|B3ME80_DROAN GF12507 OS=Drosophila ananassae GN=GF1250... 98 4e-19 tr|B4LM82|B4LM82_DROVI GJ20568 OS=Drosophila virilis GN=GJ20568 ... 97 5e-19 tr|B4QAZ6|B4QAZ6_DROSI GD11798 OS=Drosophila simulans GN=GD11798... 96 1e-18 tr|B4PA68|B4PA68_DROYA GE14326 OS=Drosophila yakuba GN=GE14326 P... 96 1e-18 tr|B4MYD5|B4MYD5_DROWI GK22197 OS=Drosophila willistoni GN=GK221... 96 1e-18 tr|B4KNM9|B4KNM9_DROMO GI20836 OS=Drosophila mojavensis GN=GI208... 96 1e-18 tr|B4I8T4|B4I8T4_DROSE GM16049 OS=Drosophila sechellia GN=GM1604... 96 1e-18 tr|B3NPS5|B3NPS5_DROER GG22888 OS=Drosophila erecta GN=GG22888 P... 96 1e-18 tr|B4J6L5|B4J6L5_DROGR GH20751 OS=Drosophila grimshawi GN=GH2075... 96 2e-18 tr|B0XJC0|B0XJC0_CULQU WD repeat domain 70 OS=Culex quinquefasci... 94 5e-18 tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes... 92 2e-17 tr|B3S013|B3S013_TRIAD Putative uncharacterized protein OS=Trich... 90 1e-16 tr|A7RL14|A7RL14_NEMVE Predicted protein (Fragment) OS=Nematoste... 89 3e-16 tr|A8K564|A8K564_HUMAN cDNA FLJ76716, highly similar to Homo sap... 89 3e-16 tr|A2Z895|A2Z895_ORYSI Putative uncharacterized protein OS=Oryza... 86 2e-15 tr|A8N0S3|A8N0S3_COPC7 Putative uncharacterized protein OS=Copri... 83 1e-14 tr|Q4SJF2|Q4SJF2_TETNG Chromosome 4 SCAF14575, whole genome shot... 82 2e-14 tr|B7QE59|B7QE59_IXOSC WD-repeat protein, putative OS=Ixodes sca... 78 4e-13 tr|B6LG29|B6LG29_BRAFL Putative uncharacterized protein OS=Branc... 69 3e-10 tr|A8PT87|A8PT87_BRUMA Protein kinase domain containing protein ... 59 2e-07
>tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 543
Score = 174 bits (441), Expect = 3e-42 Identities = 82/93 (88%), Positives = 90/93 (96%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKRQREKAR DP+KS+RPDLPVTGPGFGGRVG+TKGSLLTQYLLKEGG+IKETWM+ED Sbjct: 443 PSRKRQREKARIDPIKSQRPDLPVTGPGFGGRVGSTKGSLLTQYLLKEGGMIKETWMEED 502
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 PR AILKYADVAAKDPK+IAPAYA+TQP+T FA Sbjct: 503 PREAILKYADVAAKDPKFIAPAYAQTQPETFFA 535
>tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199066 PE=4 SV=1 Length = 666
Score = 165 bits (418), Expect = 2e-39 Identities = 76/92 (82%), Positives = 86/92 (93%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKR REKAR+DP+KSKRPDLP++GPGFGGRVGTTKGSLLTQYL++EGG+IKETWMDED Sbjct: 564 PSRKRAREKARNDPIKSKRPDLPMSGPGFGGRVGTTKGSLLTQYLMREGGMIKETWMDED 623
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIF 278 PR AILK+AD AAKDP + PAYAETQP+TIF Sbjct: 624 PREAILKHADAAAKDPTFFGPAYAETQPQTIF 655
>tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0071K18.5 PE=4 SV=1 Length = 646
Score = 163 bits (412), Expect = 8e-39 Identities = 76/93 (81%), Positives = 83/93 (89%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKRQREK DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED Sbjct: 544 PSRKRQREKILKDPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 603
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 PR AILKYAD A KDPK+IAPAY++TQPK +FA Sbjct: 604 PREAILKYADAAEKDPKFIAPAYSQTQPKPVFA 636
>tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028489001 PE=4 SV=1 Length = 511
Score = 163 bits (412), Expect = 8e-39 Identities = 75/93 (80%), Positives = 86/93 (92%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKRQREK DP+KS +P+LP+TGPGFGGRVG+TKGSLLTQYLLK+GGLIKETWM+ED Sbjct: 410 PSRKRQREKILKDPIKSHKPELPITGPGFGGRVGSTKGSLLTQYLLKQGGLIKETWMEED 469
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 PR AILKYADVAA DPK+IAPAYA+TQP+ +FA Sbjct: 470 PREAILKYADVAANDPKFIAPAYAQTQPEPVFA 502
>tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030560 PE=4 SV=1 Length = 571
Score = 163 bits (412), Expect = 8e-39 Identities = 76/93 (81%), Positives = 83/93 (89%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKRQREK DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED Sbjct: 469 PSRKRQREKILKDPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 528
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 PR AILKYAD A KDPK+IAPAY++TQPK +FA Sbjct: 529 PREAILKYADAAEKDPKFIAPAYSQTQPKPVFA 561
>tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33932 PE=4 SV=1 Length = 644
Score = 163 bits (412), Expect = 8e-39 Identities = 76/93 (81%), Positives = 83/93 (89%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKRQREK DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED Sbjct: 542 PSRKRQREKILKDPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 601
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 PR AILKYAD A KDPK+IAPAY++TQPK +FA Sbjct: 602 PREAILKYADAAEKDPKFIAPAYSQTQPKPVFA 634
>tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE=2 SV=1 Length = 622
Score = 162 bits (409), Expect = 2e-38 Identities = 75/93 (80%), Positives = 83/93 (89%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKRQREK DP+KS +P+ PV GPG+GGRVGTTKGSLLTQYLLKEGGLIKETWMDED Sbjct: 521 PSRKRQREKILKDPLKSHKPEAPVNGPGYGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 580
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 PR AILKYAD A KDPK+IAPAY++TQPK +FA Sbjct: 581 PREAILKYADAAEKDPKFIAPAYSQTQPKPVFA 613
>tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein (At2g20330/F11A3.12) OS=Arabidopsis thaliana GN=At2g20330 PE=2 SV=1 Length = 648
Score = 157 bits (397), Expect = 4e-37 Identities = 72/93 (77%), Positives = 84/93 (90%) Frame = +3
Query: 3 PSRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDED 182 PSRKR+REKA DPMKS +P++P+TGPG GGRVGTT LLTQYLLK+GG+IKETWM+ED Sbjct: 543 PSRKREREKALKDPMKSHKPEIPMTGPGHGGRVGTTGSGLLTQYLLKQGGMIKETWMEED 602
Query: 183 PRAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 PR AILKYA+VA KDPK+IAPAY++TQPKTIFA Sbjct: 603 PREAILKYAEVAVKDPKFIAPAYSQTQPKTIFA 635
>tr|Q293F7|Q293F7_DROPS GA18958 OS=Drosophila pseudoobscura pseudoobscura GN=GA18958 PE=4 SV=2 Length = 644
Score = 99.0 bits (245), Expect = 2e-19 Identities = 52/92 (56%), Positives = 69/92 (75%) Frame = +3
Query: 6 SRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDP 185 S +++ EKAR DP+KSKRPDLP+T G GGRV ++ G+L + Y+++ GL K D+DP Sbjct: 535 SSRKKMEKARMDPVKSKRPDLPITS-GQGGRVASSGGTL-SSYVIRNLGLSKRVDDDQDP 592
Query: 186 RAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 R AILKYA AA++P +IAPAY ETQPK IF+ Sbjct: 593 REAILKYAKDAAENPYWIAPAYKETQPKAIFS 624
>tr|B4GBL0|B4GBL0_DROPE GL11034 OS=Drosophila persimilis GN=GL11034 PE=4 SV=1 Length = 644
Score = 99.0 bits (245), Expect = 2e-19 Identities = 52/92 (56%), Positives = 69/92 (75%) Frame = +3
Query: 6 SRKRQREKARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDP 185 S +++ EKAR DP+KSKRPDLP+T G GGRV ++ G+L + Y+++ GL K D+DP Sbjct: 535 SSRKKMEKARMDPVKSKRPDLPITS-GQGGRVASSGGTL-SSYVIRNLGLSKRVDDDQDP 592
Query: 186 RAAILKYADVAAKDPKYIAPAYAETQPKTIFA 281 R AILKYA AA++P +IAPAY ETQPK IF+ Sbjct: 593 REAILKYAKDAAENPYWIAPAYKETQPKAIFS 624
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