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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944174
Clone id YMU02A01NGRL0005_D08
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_D08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CGAGGAACTCACAGAATCTGGAGAGAATGTTTTTGTTGGGGGCAAAAACAGATGGAAGTA
TTCCACCTTCGTTAATTGGGAGATGTGGTGGCCCAATTTTCCAGTTCTTGTTTACTTCAA
AGAGACTCAAACAAAACCTGATGGCCAAGTCCACTTTTTTCCTGTGATTTTTAATGGAAA
GCAGCTATATGATGTAATGGTCGAGCGAGCAGGGCGATCGGTAAACAGTTTACCAAAGTA
ACTGTCTTGGTAAATACCACTATTTGTGTATACATATTGTAAGCCTAAATTTGTACGTGA
TTTTGCCTTGTATAATTTTCTTGCGCCCCAATTTGTGCATGTTATTGAGCACAGTTAGAA
CATTAAAATGAAGCATTGTTCGTGTATTTTTACTGGGCACTGGATTTTAAAGGCAATGTT
CTGAGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A6NJV1
Definition sp|A6NJV1|CB070_HUMAN UPF0573 protein C2orf70 OS=Homo sapiens
Align length 36
Score (bit) 31.6
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944174|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_D08, 5'
         (428 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6NJV1|CB070_HUMAN UPF0573 protein C2orf70 OS=Homo sapiens GN...    32   1.4  
sp|Q2FTH6|SYE_METHJ Glutamyl-tRNA synthetase OS=Methanospirillum...    31   2.4  
sp|P34522|HM26_CAEEL Homeobox protein ceh-26 OS=Caenorhabditis e...    29   7.0  

>sp|A6NJV1|CB070_HUMAN UPF0573 protein C2orf70 OS=Homo sapiens
           GN=C2orf70 PE=3 SV=1
          Length = 201

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -2

Query: 130 LSLFEVNKNWKIGPPHLPINEGGILPSVFAPNKNIL 23
           L  F+ ++N  +   H P ++GG  P++F+ N N+L
Sbjct: 46  LKYFQDHRNRAMEKSHTPFSQGGHFPTIFSTNPNLL 81


>sp|Q2FTH6|SYE_METHJ Glutamyl-tRNA synthetase OS=Methanospirillum
           hungatei (strain JF-1 / DSM 864) GN=gltX PE=3 SV=1
          Length = 561

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = -2

Query: 127 SLFEVNKNWKIGPPHLPINEGGILPSVFAPN 35
           SLFE  +  KIG P LP  EGG++   FAPN
Sbjct: 79  SLFEKKEKKKIGLPDLPKAEGGVVMR-FAPN 108


>sp|P34522|HM26_CAEEL Homeobox protein ceh-26 OS=Caenorhabditis
           elegans GN=ceh-26 PE=2 SV=1
          Length = 586

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 124 LFEVNKNWKIGPPHLPINEGGILPSVFAPNKNILSRF 14
           +F  N  + + PPH P+  GGI P    PN N  + F
Sbjct: 307 IFPANPLFHMAPPHHPVAGGGIFP----PNFNAFNAF 339
tr_hit_id A7PF34
Definition tr|A7PF34|A7PF34_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera
Align length 79
Score (bit) 155.0
E-value 1.0e-36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944174|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_D08, 5'
         (428 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PF34|A7PF34_VITVI Chromosome chr11 scaffold_13, whole genom...   155   1e-36
tr|A9NLB2|A9NLB2_PICSI Putative uncharacterized protein OS=Picea...   153   4e-36
tr|B6TPB1|B6TPB1_MAIZE Putative uncharacterized protein OS=Zea m...   151   2e-35
tr|Q0DIC2|Q0DIC2_ORYSJ Os05g0401200 protein OS=Oryza sativa subs...   149   9e-35
tr|A2Y4H0|A2Y4H0_ORYSI Putative uncharacterized protein OS=Oryza...   149   9e-35
tr|A9SGC1|A9SGC1_PHYPA Predicted protein OS=Physcomitrella paten...   147   3e-34
tr|A8I7F2|A8I7F2_CHLRE Predicted protein OS=Chlamydomonas reinha...   126   6e-28
tr|B6T536|B6T536_MAIZE Putative uncharacterized protein OS=Zea m...   124   3e-27
tr|A4S4G1|A4S4G1_OSTLU Predicted protein OS=Ostreococcus lucimar...   107   3e-22
tr|Q00Z75|Q00Z75_OSTTA Chromosome 11 contig 1, DNA sequence. (Fr...   105   1e-21
tr|B8C1Y9|B8C1Y9_THAPS Predicted protein OS=Thalassiosira pseudo...    84   5e-15
tr|B7G457|B7G457_PHATR Predicted protein OS=Phaeodactylum tricor...    65   2e-09
tr|B8BQR9|B8BQR9_THAPS Predicted protein OS=Thalassiosira pseudo...    57   6e-07
tr|Q8DJW2|Q8DJW2_THEEB Tll1109 protein OS=Thermosynechococcus el...    54   5e-06
tr|B8C1Y6|B8C1Y6_THAPS Putative uncharacterized protein OS=Thala...    54   5e-06
tr|A0YZ83|A0YZ83_9CYAN Putative uncharacterized protein OS=Lyngb...    53   9e-06
tr|B4VMR8|B4VMR8_9CYAN Putative uncharacterized protein OS=Micro...    52   1e-05
tr|Q2JPE8|Q2JPE8_SYNJB Putative uncharacterized protein OS=Synec...    51   3e-05
tr|A5GR70|A5GR70_SYNR3 Uncharacterized conserved membrane protei...    50   7e-05
tr|Q31RA8|Q31RA8_SYNE7 Putative uncharacterized protein OS=Synec...    48   2e-04
tr|Q5N2Z5|Q5N2Z5_SYNP6 Putative uncharacterized protein OS=Synec...    48   3e-04
tr|A0ZE55|A0ZE55_NODSP Putative uncharacterized protein OS=Nodul...    48   3e-04
tr|Q3MCH8|Q3MCH8_ANAVT Putative uncharacterized protein OS=Anaba...    47   4e-04
tr|B1XJF5|B1XJF5_SYNP2 Putative uncharacterized protein OS=Synec...    47   4e-04
tr|B8HRY6|B8HRY6_9CHRO Putative uncharacterized protein OS=Cyano...    47   4e-04
tr|B5VU69|B5VU69_SPIMA Putative uncharacterized protein OS=Arthr...    47   4e-04
tr|B4B806|B4B806_9CHRO Putative uncharacterized protein OS=Cyano...    47   4e-04
tr|B7JUX2|B7JUX2_SYNP8 Putative uncharacterized protein OS=Synec...    47   6e-04
tr|B4BY74|B4BY74_9CHRO Putative uncharacterized protein OS=Cyano...    47   6e-04
tr|B7KGU4|B7KGU4_9CHRO Putative uncharacterized protein OS=Cyano...    46   8e-04

>tr|A7PF34|A7PF34_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016891001
           PE=4 SV=1
          Length = 208

 Score =  155 bits (392), Expect = 1e-36
 Identities = 69/79 (87%), Positives = 74/79 (93%)
 Frame = +2

Query: 2   EELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           E+L ESGENVFVGGKNRWKYSTFVNWE+WWPNFP+LVYFKETQT+P+GQVHFFPVIFNGK
Sbjct: 130 EQLQESGENVFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTRPEGQVHFFPVIFNGK 189

Query: 182 QLYDVMVERAGRSVNSLPK 238
           QLYDVMVERAG S  S PK
Sbjct: 190 QLYDVMVERAGPSKTSGPK 208


>tr|A9NLB2|A9NLB2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 220

 Score =  153 bits (387), Expect = 4e-36
 Identities = 67/79 (84%), Positives = 74/79 (93%)
 Frame = +2

Query: 2   EELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           +EL ESG+N FVGGKN+WK+STFVNWE+WWPNFP+LVYFKETQTKP+GQVHFFPVIFNGK
Sbjct: 142 DELEESGQNAFVGGKNKWKFSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPVIFNGK 201

Query: 182 QLYDVMVERAGRSVNSLPK 238
           QLYDVMVERAG S NS PK
Sbjct: 202 QLYDVMVERAGPSKNSGPK 220


>tr|B6TPB1|B6TPB1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 163

 Score =  151 bits (381), Expect = 2e-35
 Identities = 67/79 (84%), Positives = 73/79 (92%)
 Frame = +2

Query: 2   EELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           E+L ESGENVFVGGKNRWKYSTFVNWE+WWP FPVLVYFKETQTKP+GQ+HFFPVIF+G+
Sbjct: 85  EQLQESGENVFVGGKNRWKYSTFVNWELWWPQFPVLVYFKETQTKPEGQIHFFPVIFDGR 144

Query: 182 QLYDVMVERAGRSVNSLPK 238
           QLYDVMVERAG S  S PK
Sbjct: 145 QLYDVMVERAGPSKTSGPK 163


>tr|Q0DIC2|Q0DIC2_ORYSJ Os05g0401200 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0401200 PE=4 SV=1
          Length = 187

 Score =  149 bits (375), Expect = 9e-35
 Identities = 64/79 (81%), Positives = 72/79 (91%)
 Frame = +2

Query: 2   EELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           ++L ESGENVFVGGKNRW+YSTFVNWE+WWP FP+LVYFKETQTKP+GQ+HFFPVIFNG+
Sbjct: 109 DQLEESGENVFVGGKNRWRYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIFNGR 168

Query: 182 QLYDVMVERAGRSVNSLPK 238
           QLYD MVERAG S  S PK
Sbjct: 169 QLYDAMVERAGPSETSGPK 187


>tr|A2Y4H0|A2Y4H0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19899 PE=4 SV=1
          Length = 187

 Score =  149 bits (375), Expect = 9e-35
 Identities = 64/79 (81%), Positives = 72/79 (91%)
 Frame = +2

Query: 2   EELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           ++L ESGENVFVGGKNRW+YSTFVNWE+WWP FP+LVYFKETQTKP+GQ+HFFPVIFNG+
Sbjct: 109 DQLEESGENVFVGGKNRWRYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIFNGR 168

Query: 182 QLYDVMVERAGRSVNSLPK 238
           QLYD MVERAG S  S PK
Sbjct: 169 QLYDAMVERAGPSETSGPK 187


>tr|A9SGC1|A9SGC1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_233279 PE=4 SV=1
          Length = 223

 Score =  147 bits (371), Expect = 3e-34
 Identities = 66/79 (83%), Positives = 71/79 (89%)
 Frame = +2

Query: 2   EELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           +EL ESGENVFVGGKNRW YS+FVNWE+WWP FPVLVYFKETQTKP+GQ+HFFPVIFNG 
Sbjct: 144 KELDESGENVFVGGKNRWSYSSFVNWELWWPIFPVLVYFKETQTKPEGQIHFFPVIFNGN 203

Query: 182 QLYDVMVERAGRSVNSLPK 238
           QLYDVMVERAG S  S PK
Sbjct: 204 QLYDVMVERAGPSKTSGPK 222


>tr|A8I7F2|A8I7F2_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_182514 PE=4 SV=1
          Length = 189

 Score =  126 bits (316), Expect = 6e-28
 Identities = 53/75 (70%), Positives = 63/75 (84%)
 Frame = +2

Query: 14  ESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGKQLYD 193
           +  ENV VGG+NRW+YS+F+NWE W+P FPVLVYFKE QTKP+GQVHFFP+IFNGKQLY+
Sbjct: 115 QESENVIVGGRNRWEYSSFINWEFWFPGFPVLVYFKENQTKPEGQVHFFPIIFNGKQLYE 174

Query: 194 VMVERAGRSVNSLPK 238
            MVER G +  S PK
Sbjct: 175 AMVERCGPTKTSGPK 189


>tr|B6T536|B6T536_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 199

 Score =  124 bits (310), Expect = 3e-27
 Identities = 52/65 (80%), Positives = 58/65 (89%)
 Frame = +2

Query: 2   EELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           E+L ESGENVFVGGKNRWKYSTFVNWE+WWP FPVLVYFKETQTKP+GQ+HFFPVIF   
Sbjct: 133 EQLQESGENVFVGGKNRWKYSTFVNWELWWPQFPVLVYFKETQTKPEGQIHFFPVIFVSS 192

Query: 182 QLYDV 196
            + D+
Sbjct: 193 SIVDL 197


>tr|A4S4G1|A4S4G1_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_26400 PE=4 SV=1
          Length = 267

 Score =  107 bits (267), Expect = 3e-22
 Identities = 48/87 (55%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   ELTESGENVFVGG-KNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           ++  SG+N   GG +NRW Y T  NWE WWP FP LVYFKETQTK DGQ HFFP+I +GK
Sbjct: 146 DVASSGDNKLQGGGENRWAYDTITNWEFWWPGFPCLVYFKETQTKSDGQPHFFPIIMDGK 205

Query: 182 QLYDVMVERAGRSVNSLPK*LSW*IPL 262
            LY+VM+ R   S N  P    W + L
Sbjct: 206 MLYEVMLSRLPPSQNEKPSPSEWSLDL 232


>tr|Q00Z75|Q00Z75_OSTTA Chromosome 11 contig 1, DNA sequence.
           (Fragment) OS=Ostreococcus tauri GN=Ot11g00790 PE=4 SV=1
          Length = 186

 Score =  105 bits (261), Expect = 1e-21
 Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   ELTESGENVFVGG-KNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPVIFNGK 181
           ++  SG+N   GG +NRW Y +  NWE WWP FP LVYF+ETQTK DGQ HFFP+I +G+
Sbjct: 65  DVATSGDNKLQGGGENRWAYDSITNWEFWWPGFPCLVYFRETQTKSDGQPHFFPIIMDGE 124

Query: 182 QLYDVMVERAGRSVNSLPK*LSW*IPL 262
            LY VM++R  +SVN  P    W + L
Sbjct: 125 LLYKVMLDRFPKSVNEKPSPSEWSLDL 151