DK944181
Clone id YMU02A01NGRL0005_D18
Library
Length 184
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_D18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GTGTCGAGGGTGGCACCCTGTTCCTCCGATGTATGGAGGGTCTGCTTATGGTGGATTCTA
TGATGTTGTTGGTTGTGTCCGGTTTGGCTGTCTCCGTGGCTCGTGTTGAGCCACATATGT
TTATGTAATTTTTTGGTTTTGCTAATATATTCACACAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
■■Homology search results ■■ -
sp_hit_id P0C6A2
Definition sp|P0C6A2|MAMD1_MOUSE Mastermind-like domain-containing protein 1 OS=Mus musculus
Align length 36
Score (bit) 29.6
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944181|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_D18, 5'
(156 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P0C6A2|MAMD1_MOUSE Mastermind-like domain-containing protein ... 30 5.0
sp|Q925H2|KR169_MOUSE Keratin-associated protein 16-9 OS=Mus mus... 30 5.0

>sp|P0C6A2|MAMD1_MOUSE Mastermind-like domain-containing protein 1
OS=Mus musculus GN=Mamld1 PE=2 SV=1
Length = 803

Score = 29.6 bits (65), Expect = 5.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2

Query: 125 HKHMWLNTSHGDSQTGHNQQHHRIHHKQTLHTSEEQ 18
H + H Q H QQHH+ HH Q ++Q
Sbjct: 594 HHQQHHHQQHHHQQQHHQQQHHQQHHHQQQQHQQQQ 629


>sp|Q925H2|KR169_MOUSE Keratin-associated protein 16-9 OS=Mus
musculus GN=Krtap16-9 PE=2 SV=1
Length = 87

Score = 29.6 bits (65), Expect = 5.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2

Query: 32 YGGSAYGGFYDVVGCVRFGCLRGSC*ATYVYVIFW 136
YGG YG Y GC GC R SC Y + F+
Sbjct: 56 YGGYGYGSSYGGYGC---GCRRPSCCGRYGFSNFY 87


tr_hit_id B3LZV4
Definition tr|B3LZV4|B3LZV4_DROAN GF16692 OS=Drosophila ananassae
Align length 40
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944181|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_D18, 5'
(156 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3LZV4|B3LZV4_DROAN GF16692 OS=Drosophila ananassae GN=GF1669... 35 1.9
tr|B3LYI7|B3LYI7_DROAN GF16793 OS=Drosophila ananassae GN=GF1679... 35 2.5
tr|B4JWS3|B4JWS3_DROGR GH17704 OS=Drosophila grimshawi GN=GH1770... 34 4.2
tr|Q5CT94|Q5CT94_CRYPV eIF4G eukaryotic initiation factor 4, Nic... 33 5.5
tr|Q1E861|Q1E861_COCIM Putative uncharacterized protein OS=Cocci... 33 5.5
tr|B3RI29|B3RI29_TRIAD Putative uncharacterized protein OS=Trich... 33 7.2

>tr|B3LZV4|B3LZV4_DROAN GF16692 OS=Drosophila ananassae GN=GF16692
PE=4 SV=1
Length = 136

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -2

Query: 119 HMWLNTSHGDSQTGHNQQHHR---IHHKQTLHTSEEQGAT 9
H HG Q H QQHHR +HH+Q+LH + T
Sbjct: 26 HHQQQQQHGQQQHHHLQQHHRQHSLHHQQSLHLQRQHSHT 65


>tr|B3LYI7|B3LYI7_DROAN GF16793 OS=Drosophila ananassae GN=GF16793
PE=4 SV=1
Length = 1404

Score = 34.7 bits (78), Expect = 2.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2

Query: 149 YISKTKKLHKHMWLNTSHGDSQTGHNQQHHRIHH 48
++ KT L+ N HG QTGH QHH HH
Sbjct: 621 HVDKTTALNN----NNKHGMDQTGHQHQHHHHHH 650


>tr|B4JWS3|B4JWS3_DROGR GH17704 OS=Drosophila grimshawi GN=GH17704
PE=4 SV=1
Length = 1572

Score = 33.9 bits (76), Expect = 4.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2

Query: 110 LNTSHGDSQTGHNQQHHRIHHKQTLHTSEEQGAT 9
+N+S G+S H QQHH +H Q + S++Q T
Sbjct: 88 VNSSSGNSHHHHQQQHHHHNHHQHHYQSQQQSTT 121


>tr|Q5CT94|Q5CT94_CRYPV eIF4G eukaryotic initiation factor 4, Nic
domain containing protein OS=Cryptosporidium parvum Iowa
II GN=cgd2_3920 PE=4 SV=1
Length = 1235

Score = 33.5 bits (75), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2

Query: 125 HKHMWLNTSHGDSQTGHNQQHHRIHHKQTLHTSEEQ 18
H+H Q H+QQHH+ HH+Q H ++Q
Sbjct: 209 HQHQQQQHHQQHHQQQHHQQHHQQHHQQQQHQHQQQ 244


>tr|Q1E861|Q1E861_COCIM Putative uncharacterized protein
OS=Coccidioides immitis GN=CIMG_01252 PE=4 SV=1
Length = 889

Score = 33.5 bits (75), Expect = 5.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = -2

Query: 149 YISKTKKLHKHMWLNTSHGDSQ----TGHNQQHHRIHHKQTLHTSE 24
Y++K +++H HM L TS +Q H QQ + H Q HT E
Sbjct: 774 YLAKVQQMHPHMALPTSPAQNQQRKKEQHQQQQQQQHQPQHQHTDE 819


>tr|B3RI29|B3RI29_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_52361 PE=4 SV=1
Length = 1768

Score = 33.1 bits (74), Expect = 7.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2

Query: 143 SKTKKLHKHMWLNTSHGDSQTGHNQQHHRIHHKQTLHT 30
S+ +W++T H +Q GH + HR+ H T T
Sbjct: 423 SQCNNYQNSLWISTQHQLTQNGHCEDDHRVSHTYTFET 460