DK944188
Clone id YMU02A01NGRL0005_E02
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_E02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTC
CCAGGGACAAGAAGGGATGATATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGGGCA
AAAATGATGAATAGAATAAATTGAAAGAAAAGTGAAAAAAAAAATGGAAAAGGGCAAGAA
GGCCTTGTGAAAATATTACGATTTTTGATCTCGCACGACAAATTCTGATAAAATGACTTA
TCAACAATCTGGTAATCTCATATTCAAGAGAACTATACCAACTCCTGGAATATAGAAATA
GGAATGAGGGACCTAAAAGTGGTTTGGGTAGCTTAGTGGGAACAGATATGACAATTGCCA
TTGGAAAATCTTCCAAAGAACCGAAAGACTTATTCGACAGTATGGAAGACTGGCTCAGGA
GAGATCGTTTTGTATTTGTGGGTTGGTCCGGCTTACTACTATTTCCCACCGCTTACTTCG
CCCTGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTCCCAGAGACAAGA
AGGGATGATA
■■Homology search results ■■ -
sp_hit_id Q85FM2
Definition sp|Q85FM2|PSBD_ADICA Photosystem II D2 protein OS=Adiantum capillus-veneris
Align length 48
Score (bit) 101.0
E-value 2.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944188|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_E02, 5'
(550 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q85FM2|PSBD_ADICA Photosystem II D2 protein OS=Adiantum capil... 101 2e-21
sp|A2T330|PSBD_ANGEV Photosystem II D2 protein OS=Angiopteris ev... 99 1e-20
sp|Q8WI19|PSBD_PSINU Photosystem II D2 protein OS=Psilotum nudum... 98 2e-20
sp|P06404|PSBD_MARPO Photosystem II D2 protein OS=Marchantia pol... 97 7e-20
sp|Q8M9W4|PSBD_CHAGL Photosystem II D2 protein OS=Chaetosphaerid... 97 7e-20
sp|Q6YXN8|PSBD_PHYPA Photosystem II D2 protein OS=Physcomitrella... 96 1e-19
sp|Q85AC9|PSBD_ANTFO Photosystem II D2 protein OS=Anthoceros for... 95 2e-19
sp|Q32RM5|PSBD_ZYGCR Photosystem II D2 protein OS=Zygnema circum... 94 4e-19
sp|Q32RT0|PSBD_STAPU Photosystem II D2 protein OS=Staurastrum pu... 94 4e-19
sp|Q1ACJ7|PSBD_CHAVU Photosystem II D2 protein OS=Chara vulgaris... 92 2e-18
sp|P06005|PSBD_SPIOL Photosystem II D2 protein OS=Spinacia olera... 91 3e-18
sp|A8W3B9|PSBD_CUSEX Photosystem II D2 protein OS=Cuscuta exalta... 91 5e-18
sp|P41644|PSBD_PINTH Photosystem II D2 protein OS=Pinus thunberg... 90 6e-18
sp|Q09MI3|PSBD_CITSI Photosystem II D2 protein OS=Citrus sinensi... 90 8e-18
sp|A7M961|PSBD_CUSRE Photosystem II D2 protein OS=Cuscuta reflex... 89 1e-17
sp|B1VKH0|PSBD_CRYJA Photosystem II D2 protein OS=Cryptomeria ja... 89 1e-17
sp|Q4FFP1|PSBD_RANMC Photosystem II D2 protein OS=Ranunculus mac... 89 2e-17
sp|A4GGA2|PSBD_PHAVU Photosystem II D2 protein OS=Phaseolus vulg... 89 2e-17
sp|A4QJS8|PSBD_OLIPU Photosystem II D2 protein OS=Olimarabidopsi... 89 2e-17
sp|B0Z5C4|PSBD_OENPA Photosystem II D2 protein OS=Oenothera parv... 89 2e-17
sp|B0Z540|PSBD_OENGL Photosystem II D2 protein OS=Oenothera glaz... 89 2e-17
sp|Q9MTN1|PSBD_OENEH Photosystem II D2 protein OS=Oenothera elat... 89 2e-17
sp|B0Z4V6|PSBD_OENBI Photosystem II D2 protein OS=Oenothera bien... 89 2e-17
sp|B0Z4M2|PSBD_OENAR Photosystem II D2 protein OS=Oenothera argi... 89 2e-17
sp|A4QLS8|PSBD_NASOF Photosystem II D2 protein OS=Nasturtium off... 89 2e-17
sp|A4QLI9|PSBD_LOBMA Photosystem II D2 protein OS=Lobularia mari... 89 2e-17
sp|A4QLA1|PSBD_LEPVR Photosystem II D2 protein OS=Lepidium virgi... 89 2e-17
sp|A4QL14|PSBD_DRANE Photosystem II D2 protein OS=Draba nemorosa... 89 2e-17
sp|A6H5G6|PSBD_CYCTA Photosystem II D2 protein OS=Cycas taitunge... 89 2e-17
sp|A4QKS6|PSBD_CRUWA Photosystem II D2 protein OS=Crucihimalaya ... 89 2e-17

>sp|Q85FM2|PSBD_ADICA Photosystem II D2 protein OS=Adiantum
capillus-veneris GN=psbD PE=2 SV=1
Length = 353

Score = 101 bits (252), Expect = 2e-21
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSSKEPKDLFDSM+DWLRRDRFVFVGWSGLLLFPTAYFALGG
Sbjct: 1 MTIAIGKSSKEPKDLFDSMDDWLRRDRFVFVGWSGLLLFPTAYFALGG 48


>sp|A2T330|PSBD_ANGEV Photosystem II D2 protein OS=Angiopteris
evecta GN=psbD PE=3 SV=1
Length = 353

Score = 99.4 bits (246), Expect = 1e-20
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSSKEPKDLFDSM+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIAIGKSSKEPKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>sp|Q8WI19|PSBD_PSINU Photosystem II D2 protein OS=Psilotum nudum
GN=psbD PE=3 SV=1
Length = 353

Score = 98.2 bits (243), Expect = 2e-20
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSSKEPKDLFD+M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIAIGKSSKEPKDLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>sp|P06404|PSBD_MARPO Photosystem II D2 protein OS=Marchantia
polymorpha GN=psbD PE=1 SV=1
Length = 353

Score = 96.7 bits (239), Expect = 7e-20
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSSKEPK LFDSM+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIAIGKSSKEPKGLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>sp|Q8M9W4|PSBD_CHAGL Photosystem II D2 protein OS=Chaetosphaeridium
globosum GN=psbD PE=3 SV=1
Length = 353

Score = 96.7 bits (239), Expect = 7e-20
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSSKEPK LFDSM+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIAIGKSSKEPKGLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>sp|Q6YXN8|PSBD_PHYPA Photosystem II D2 protein OS=Physcomitrella
patens GN=psbD PE=3 SV=1
Length = 353

Score = 95.5 bits (236), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSSKEPK LFDSM+DWLRRDRFVFVGWSGLLLFP AYF+LGG
Sbjct: 1 MTIAIGKSSKEPKGLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFSLGG 48


>sp|Q85AC9|PSBD_ANTFO Photosystem II D2 protein OS=Anthoceros
formosae GN=psbD PE=2 SV=1
Length = 353

Score = 95.1 bits (235), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSS+EPK LFDSM+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIAIGKSSEEPKGLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>sp|Q32RM5|PSBD_ZYGCR Photosystem II D2 protein OS=Zygnema
circumcarinatum GN=psbD PE=3 SV=1
Length = 353

Score = 94.0 bits (232), Expect = 4e-19
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSS++PK LFDSM+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIAIGKSSEQPKGLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>sp|Q32RT0|PSBD_STAPU Photosystem II D2 protein OS=Staurastrum
punctulatum GN=psbD PE=3 SV=1
Length = 353

Score = 94.0 bits (232), Expect = 4e-19
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSSK+P+ LFDSM+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIAIGKSSKQPQGLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>sp|Q1ACJ7|PSBD_CHAVU Photosystem II D2 protein OS=Chara vulgaris
GN=psbD PE=3 SV=1
Length = 353

Score = 92.0 bits (227), Expect = 2e-18
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIAIGKSS+EPK +FD+M+DWLRRDRFVFVGWSGLLLFP AYF+LGG
Sbjct: 1 MTIAIGKSSEEPKGIFDTMDDWLRRDRFVFVGWSGLLLFPCAYFSLGG 48


tr_hit_id B7ZIL2
Definition tr|B7ZIL2|B7ZIL2_KETDA Photosystem II protein D2 OS=Keteleeria davidiana
Align length 48
Score (bit) 91.3
E-value 3.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944188|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_E02, 5'
(550 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ZIL2|B7ZIL2_KETDA Photosystem II protein D2 OS=Keteleeria d... 91 3e-17
tr|Q4FFP3|Q4FFP3_GINBI Photosystem II D2 protein (Fragment) OS=G... 89 1e-16
tr|Q5SCW4|Q5SCW4_HUPLU Photosystem II D2 protein (Fragment) OS=H... 89 2e-16
tr|Q9TI09|Q9TI09_SINAL Photosystem II D2 protein (Fragment) OS=S... 89 2e-16
tr|A9QB60|A9QB60_9SPER Photosystem II D2 protein (Fragment) OS=C... 89 2e-16
tr|Q4FFN9|Q4FFN9_9ASPA Photosystem II D2 protein (Fragment) OS=Y... 88 3e-16
tr|B7T462|B7T462_9ROSI Photosystem II protein D2 OS=Pelargonium ... 88 3e-16
tr|B7T3Z1|B7T3Z1_9ROSI Photosystem II protein D2 OS=Monsonia van... 88 3e-16
tr|B7T3S0|B7T3S0_9ROSI Photosystem II protein D2 OS=Monsonia spe... 88 3e-16
tr|A9QAY3|A9QAY3_9APIA Photosystem II D2 protein (Fragment) OS=A... 87 4e-16
tr|B8Y2V9|B8Y2V9_FESAR Photosystem II protein D2 OS=Festuca arun... 87 6e-16
tr|B6DXC0|B6DXC0_9POAL Photosystem II D2 protein OS=Leymus chine... 87 6e-16
tr|B2CHJ7|B2CHJ7_WHEAT Photosystem II protein D2 OS=Triticum aes... 87 6e-16
tr|Q7XK09|Q7XK09_ORYSJ OSJNBa0061C08.9 protein OS=Oryza sativa s... 87 7e-16
tr|Q7F4T1|Q7F4T1_ORYSJ Photosystem II D2 protein OS=Oryza sativa... 87 7e-16
tr|Q6Z1U4|Q6Z1U4_ORYSJ Photosystem II D2 protein OS=Oryza sativa... 87 7e-16
tr|Q4FFP0|Q4FFP0_TYPLA Photosystem II D2 protein (Fragment) OS=T... 87 7e-16
tr|Q108X8|Q108X8_ORYSJ Photosystem II D2 protein, putative OS=Or... 87 7e-16
tr|B7T3J9|B7T3J9_9ROSI Photosystem II protein D2 OS=Geranium pal... 87 7e-16
tr|B7T3C8|B7T3C8_9ROSI Photosystem II protein D2 OS=Geranium mac... 87 7e-16
tr|B7T2R6|B7T2R6_9ROSI Photosystem II protein D2 OS=Erodium chry... 87 7e-16
tr|B5AH10|B5AH10_9ROSI Photosystem II protein D2 OS=Gonystylus b... 87 7e-16
tr|B2ZE95|B2ZE95_9POAL Photosystem II protein D2 OS=Phyllostachy... 87 7e-16
tr|B2D060|B2D060_OLEEU PSII D2 protein OS=Olea europaea GN=psbD ... 87 7e-16
tr|A9QC97|A9QC97_TRACE Photosystem II protein D2 (Fragment) OS=T... 87 7e-16
tr|A9QC23|A9QC23_9ASTR Photosystem II D2 protein (Fragment) OS=S... 87 7e-16
tr|A9QBV0|A9QBV0_PASBI Photosystem II D2 protein (Fragment) OS=P... 87 7e-16
tr|A9QBD6|A9QBD6_ELAOL Photosystem II D2 protein (Fragment) OS=E... 87 7e-16
tr|B7T2Y7|B7T2Y7_EROTE Photosystem II protein D2 OS=Erodium texa... 86 1e-15
tr|A9QBM9|A9QBM9_MUSAC Photosystem II D2 protein (Fragment) OS=M... 86 1e-15

>tr|B7ZIL2|B7ZIL2_KETDA Photosystem II protein D2 OS=Keteleeria
davidiana GN=psbD PE=4 SV=1
Length = 353

Score = 91.3 bits (225), Expect = 3e-17
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MT+A+GKSSKE K LFD+M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTVALGKSSKEEKTLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|Q4FFP3|Q4FFP3_GINBI Photosystem II D2 protein (Fragment)
OS=Ginkgo biloba GN=psbD PE=3 SV=1
Length = 353

Score = 89.4 bits (220), Expect = 1e-16
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIA+GKSSK+ K LFD M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIALGKSSKKEKQLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|Q5SCW4|Q5SCW4_HUPLU Photosystem II D2 protein (Fragment)
OS=Huperzia lucidula GN=psbD PE=3 SV=1
Length = 353

Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +3

Query: 351 TIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
TIAIGKSS+EPK LFDSM+DWLRRDRFV VGWSGLLLFP AYF+LGG
Sbjct: 2 TIAIGKSSEEPKGLFDSMDDWLRRDRFVSVGWSGLLLFPCAYFSLGG 48


>tr|Q9TI09|Q9TI09_SINAL Photosystem II D2 protein (Fragment)
OS=Sinapis alba GN=psbD PE=4 SV=1
Length = 78

Score = 88.6 bits (218), Expect = 2e-16
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIA+GK +K+ KDLFD M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|A9QB60|A9QB60_9SPER Photosystem II D2 protein (Fragment)
OS=Cycas micronesica GN=psbD PE=3 SV=1
Length = 353

Score = 88.6 bits (218), Expect = 2e-16
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MT+A+GKSSKE K+LFD +DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTVALGKSSKEEKNLFDIADDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|Q4FFN9|Q4FFN9_9ASPA Photosystem II D2 protein (Fragment)
OS=Yucca schidigera GN=psbD PE=3 SV=1
Length = 353

Score = 87.8 bits (216), Expect = 3e-16
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIA+GK +KE DLFD M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIALGKFAKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|B7T462|B7T462_9ROSI Photosystem II protein D2 OS=Pelargonium
cotyledonis GN=psbD PE=4 SV=1
Length = 353

Score = 87.8 bits (216), Expect = 3e-16
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIA+GK +KE DLFD M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTIALGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|B7T3Z1|B7T3Z1_9ROSI Photosystem II protein D2 OS=Monsonia
vanderietiae GN=psbD PE=4 SV=1
Length = 353

Score = 87.8 bits (216), Expect = 3e-16
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MT+A+GK +K+ KDLFD M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTLALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|B7T3S0|B7T3S0_9ROSI Photosystem II protein D2 OS=Monsonia
speciosa GN=psbD PE=4 SV=1
Length = 353

Score = 87.8 bits (216), Expect = 3e-16
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MT+A+GK +K+ KDLFD M+DWLRRDRFVFVGWSGLLLFP AYFALGG
Sbjct: 1 MTLALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGG 48


>tr|A9QAY3|A9QAY3_9APIA Photosystem II D2 protein (Fragment)
OS=Anethum graveolens GN=psbD PE=3 SV=1
Length = 353

Score = 87.4 bits (215), Expect = 4e-16
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +3

Query: 348 MTIAIGKSSKEPKDLFDSMEDWLRRDRFVFVGWSGLLLFPTAYFALGG 491
MTIA+GK +K+ KDLFD M+DWLRRDRFVFVGWSGLLLFP AYFA+GG
Sbjct: 1 MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGG 48