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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944204
Clone id YMU02A01NGRL0005_E22
Library
Length 644
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_E22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTTCACAGAACTCCCTCACGTTCCTTTGCTTCGAAACGAGGGTAGGCACACCAGACACAA
AATTGAGTGATGCGTAATACGGACGGAGGTTCGAATCCTCGCAAGGCGTCCGGAACAAAA
GTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAGAGAAAGCAA
AAAGAACCCGGGCGGGAAAGTTTGATTTGGTCAATCTCCTTGCCCCTCCGAACTAAGTGG
CGACGAAACCGATCTTCGTATCGAGATGCGGGTGGGTCCTGTTGCTTCGGTGTCCCCCGA
AGCTAAATCTATCAAAAGAAAAGGAAATCCTCGGGAAATTTAATATTCCCTAGTACCAAT
CCGTAAAAATGGAATGTAAATCCTGGGATTGTTGACTACTAAGAGTCTCTCTTATCATTC
TATGGAGTTTCCATAGATAGGTAAGGTCGTAAGTCCCACCTTTTCTATTTTCCCCTCTCC
AAACCAAGGGTGGGGCGGCAAAGAAGATATTGCGTCTCGCCCCAATGCGGTACTCANAGA
ATAGTCTTACGGGATAGAGAAGAAGGAGGGGTAGGAAGTGGCGGCTTAGACTGATACACG
GACGTGATTCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6NRW0
Definition sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis
Align length 75
Score (bit) 31.2
E-value 4.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944204|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_E22, 5'
         (615 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m...    31   4.4  
sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri...    31   5.8  
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O...    30   7.5  
sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ...    30   7.5  
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin...    30   9.8  
sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s...    30   9.9  

>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp
           PE=2 SV=1
          Length = 860

 Score = 31.2 bits (69), Expect = 4.4
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = -2

Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
           +PPA  R   ++R ++ R+ K+I    +   G +C  + L++ KGSG     CK T +  
Sbjct: 335 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLLHS 390

Query: 107 ALRGFEPPSVLRITQ 63
           A +     S+L + Q
Sbjct: 391 ASQISGAASLLLLHQ 405


>sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacterium
           acnes GN=PPA1495 PE=3 SV=1
          Length = 178

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 131 ISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAKS 310
           +S   + TP   PR  ++N G  V F  +P   + SG+  D RI      V ++  EA++
Sbjct: 80  VSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAEN 139

Query: 311 IK 316
            K
Sbjct: 140 SK 141


>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_058290 PE=3 SV=1
          Length = 527

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +2

Query: 161 FPPRESKKNPGGKV*FGQSPCPSELSGDETDL---RIEMRVGPVASVSPEAK 307
           FPP+ ++ +PGG     + P P ++  ++ DL   R+  R+  +A+ S  AK
Sbjct: 38  FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAK 89


>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis
           GN=mtbp PE=2 SV=2
          Length = 867

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -2

Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
           +PPA  R   ++R ++ R+ K+I    +   G +C  + L++ KGSG     CK T +  
Sbjct: 339 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLLHS 394

Query: 107 A 105
           A
Sbjct: 395 A 395


>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
           protein YALI0D16379g OS=Yarrowia lipolytica
           GN=YALI0D16379g PE=3 SV=1
          Length = 818

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -3

Query: 481 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 368
           WR EN K G YD   + KL +M+R+     Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328


>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo
           sapiens GN=C14orf43 PE=1 SV=2
          Length = 1045

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = +1

Query: 73  RNTDGGSNPRK---ASGTKVVLHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRT 234
           ++  G    RK   AS TK  + F     +P L+TKR +++ G   LI  +S+P+RT
Sbjct: 483 KDGSGSEEKRKSVLASTTKCGVEFS----EPSLATKRAREDSGMVPLIIPVSVPVRT 535
tr_hit_id B8HLS9
Definition tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC 7425
Align length 83
Score (bit) 35.4
E-value 2.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944204|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_E22, 5'
         (615 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. ...    35   2.7  
tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo...    35   2.7  
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop...    35   4.5  
tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella frigid...    34   7.7  
tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein OS=Toxop...    34   7.7  
tr|Q0E3Z1|Q0E3Z1_ORYSJ Os02g0147300 protein OS=Oryza sativa subs...    34   7.8  
tr|A3A340|A3A340_ORYSJ Putative uncharacterized protein OS=Oryza...    34   7.8  

>tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC
           7425 GN=Cyan7425_1187 PE=4 SV=1
          Length = 243

 Score = 35.4 bits (80), Expect = 2.7
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
 Frame = -3

Query: 229 GGARRLTKSNFPAR---VLFAFSWWKARGRETYSGNARRLLFRTPCEDSNLRPYYASLNF 59
           G    +  S FP +    L   SW  + GRET +G   R LF    E     PY+  L  
Sbjct: 66  GNHELMMLSAFPQQSEHTLHLLSWLSSGGRETIAGYTSRDLFLEHMEWMQTLPYFLDLGD 125

Query: 58  V----SGV-PTLVSKQRNVREFC 5
           +    +GV PTL   ++   EFC
Sbjct: 126 IWLVHAGVEPTLPLAEQTTEEFC 148


>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
           OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
          Length = 174

 Score = 35.4 bits (80), Expect = 2.7
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 127 LHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRN 249
           L  RN+SP+PLL T  + K   R  + W+    +R  WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173


>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
          Length = 1857

 Score = 34.7 bits (78), Expect = 4.5
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 128 CISGISLPTPCFPPRESKKNPGGKV*FGQSPCP 226
           C+ G S PTPC P    +  PGG+   G SPCP
Sbjct: 52  CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83


>tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella
           frigidimarina (strain NCIMB 400) GN=Sfri_3053 PE=3 SV=1
          Length = 246

 Score = 33.9 bits (76), Expect = 7.7
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
 Frame = -2

Query: 281 QDPPASRYEDRFRRHLVRRGKEIDQIKLSRPGSFCFLLVESKGSGDLFRKCKTTFVPDAL 102
           +D   SR+++     ++   K+I+++ LS P  +   L      G LF    T+ +   +
Sbjct: 45  KDMQRSRWQNLLEVVVITISKQIEEVGLSNPHKYLGFL------GSLFLFIATSAICTVI 98

Query: 101 RGFEPP----SVLRITQFCVWCAYPRFEAKEREGV 9
            GFEPP    S       CV+ A P F   E++G+
Sbjct: 99  PGFEPPTGSLSSTVALALCVFVAVPMF-GIEKQGL 132


>tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_071360 PE=4 SV=1
          Length = 464

 Score = 33.9 bits (76), Expect = 7.7
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +2

Query: 113 EQKSSCISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASV 292
           E +  C+S  + P+   P   SK   GG    G+  C +  +  ET  R   R  P+AS+
Sbjct: 46  ELQKQCLSSSAAPSFSSPFSSSKPASGGSKRSGRRRCGAGAA--ETAERPSARAAPLASL 103

Query: 293 SPEAKSIKR 319
           SP A ++ R
Sbjct: 104 SPAASALSR 112


>tr|Q0E3Z1|Q0E3Z1_ORYSJ Os02g0147300 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0147300 PE=4 SV=1
          Length = 1158

 Score = 33.9 bits (76), Expect = 7.8
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +1

Query: 145 SPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRNR-SSYRDAGGSCCFGVPRS*IYQKK 321
           +PDP L  K++++E  +E        P+    RRNR    +D   S   G        KK
Sbjct: 139 TPDPSLRRKKEEEEKAKEKKAVPEQQPVAAPKRRNRWDQSQDGDASAAVG-------SKK 191

Query: 322 RKSSGNLIFPSTNP--*KWNVNPGIV 393
            K+S +   P   P   +W+  PG V
Sbjct: 192 AKTSSDWDAPDATPGIGRWDATPGRV 217


>tr|A3A340|A3A340_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005212 PE=4 SV=1
          Length = 1107

 Score = 33.9 bits (76), Expect = 7.8
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +1

Query: 145 SPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRNR-SSYRDAGGSCCFGVPRS*IYQKK 321
           +PDP L  K++++E  +E        P+    RRNR    +D   S   G        KK
Sbjct: 139 TPDPSLRRKKEEEEKAKEKKAVPEQQPVAAPKRRNRWDQSQDGDASAAVG-------SKK 191

Query: 322 RKSSGNLIFPSTNP--*KWNVNPGIV 393
            K+S +   P   P   +W+  PG V
Sbjct: 192 AKTSSDWDAPDATPGIGRWDATPGRV 217