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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944205
Clone id YMU02A01NGRL0005_E23
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_E23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTTCACGGAATTCCCTCACATTGCTTTGCTTCGAAACGAAGGTAGGCGCACCAGACACAA
AAGTGAGTGACGCCTAATACGGACGGAGGTTCGAATCCACGGAAGGTGTCCGGAACAAAA
GTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAGAGAAAGCAA
AAACAACCCGGGCGGGAAAGTTTGATTTGGACAATCTCCTTGCCCCTCCGAACTAAGTGG
CGACGAAACCGATCTTCGTATCGAGATGCGGGTGGGTCCTGTTGCTTCGGTGTCCCCCGA
AGCTGAATCTATCAGAAGAAAAGGAAATCCTTGGGAAATTTAATATTCCCTAGTACCAAT
CCGTAAAAATGGAATGTAAATCCTGGGATTGTTGACTACTAAGAGTCTCTCTTATCATTC
TATGGAGTTTCCATAGATAGGTAATGTCGTAAGTCCCACCTTTTCTATTTTCCCCTCTCC
AAACCAAGGGTGGGGCGGCAAAGAAGATATTGGGTCTCGCCCCAATGCGGTACTC
■■Homology search results ■■ -
sp_hit_id Q9ASY9
Definition sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana
Align length 46
Score (bit) 33.1
E-value 0.87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944205|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_E23, 5'
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara...    33   0.87 
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O...    31   3.3  
sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobac...    31   4.3  
sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus ma...    31   4.3  
sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri...    30   5.7  
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin...    30   7.4  
sp|Q68DQ2|CRBG3_HUMAN Beta/gamma crystallin domain-containing pr...    30   9.7  

>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog
           OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2
          Length = 221

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = +2

Query: 236 SGDETDLRIEMRVGPVASVSPEAESIRRKGNPWEI*YS-LVPIRKN 370
           SG+ +D+  E+ +G +AS++ E E  +R+G+ W++ +S +VP R N
Sbjct: 69  SGESSDM--EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112


>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_058290 PE=3 SV=1
          Length = 527

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = +2

Query: 161 FPPRESKNNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAESIRRKGN 328
           FPP+ ++++PGG     + P P ++  ++ DL        +  ++ ++E  +RK +
Sbjct: 38  FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAKRKAD 93


>sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobacter
           crescentus GN=fliI PE=3 SV=2
          Length = 444

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 206 FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAE 307
           FGQ P P+E+ G      + M  GPV  V P AE
Sbjct: 48  FGQKPLPAEVVGFRETRALLMPFGPVEGVGPGAE 81


>sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus
           marinus (strain MIT 9215) GN=cobQ PE=3 SV=2
          Length = 509

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = -1

Query: 511 NIFFAAPPLVWRGENRKGGTYDITYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GILNFP 332
           N  F    L W  EN KGGT   TY   +H +      S + Q ++ I       ILN  
Sbjct: 425 NPIFEDLDLGWFKENNKGGTIAGTY---IHGIFEN--DSWREQYINLIRKSKNLPILNKK 479

Query: 331 RISFSSDRFSFGGHRSNRTHPHLD 260
            IS+   R S   + +N  H HL+
Sbjct: 480 SISYKKKRESIIDNLANEFHKHLN 503


>sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacterium
           acnes GN=PPA1495 PE=3 SV=1
          Length = 178

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 131 ISGISLPTPCFPPRESKNNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAES 310
           +S   + TP   PR  + N G  V F  +P   + SG+  D RI      V ++  EAE+
Sbjct: 80  VSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAEN 139


>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
           protein YALI0D16379g OS=Yarrowia lipolytica
           GN=YALI0D16379g PE=3 SV=1
          Length = 818

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -1

Query: 481 WRGENRKGGTYDITYLWKLHRMIRETLSSQQSQDLHSI 368
           WR EN K G YD   + KL +M+R+     Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328


>sp|Q68DQ2|CRBG3_HUMAN Beta/gamma crystallin domain-containing protein
            3 OS=Homo sapiens GN=CRYBG3 PE=2 SV=2
          Length = 1022

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 133  FRNKSPDPLLSTKRKQKQPGRESLIWTISLPLRTKWRRNRS 255
            F++K+ D  L     +  PG +  +WT     R KWR N++
Sbjct: 937  FKSKASDTCLDVIGGRDTPGAKVALWTEHGQFRQKWRLNKN 977
tr_hit_id Q7UIE7
Definition tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodopirellula baltica
Align length 41
Score (bit) 37.0
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944205|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_E23, 5'
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo...    37   0.65 
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop...    35   1.9  
tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper...    35   3.2  
tr|Q5C5K7|Q5C5K7_SCHJA SJCHGC05489 protein (Fragment) OS=Schisto...    33   7.2  
tr|Q4RGF6|Q4RGF6_TETNG Chromosome 18 SCAF15100, whole genome sho...    33   9.3  
tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.3  

>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
           OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
          Length = 174

 Score = 37.0 bits (84), Expect = 0.65
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 127 LHFRNKSPDPLLSTKRKQKQPGRESLIWTISLPLRTKWRRN 249
           L  RN+SP+PLL T  + K   R  + WT    +R  WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173


>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
          Length = 1857

 Score = 35.4 bits (80), Expect = 1.9
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 128 CISGISLPTPCFPPRESKNNPGGKV*FGQSPCP 226
           C+ G S PTPC P    ++ PGG+   G SPCP
Sbjct: 52  CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83


>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
          Length = 577

 Score = 34.7 bits (78), Expect = 3.2
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -1

Query: 523 GARPNIFFAAPPLVWRGENRKGGTYDITYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 344
           G+RP + FA  P+  +G N  G  Y + Y W+L   +  + +     D+  I+  W  G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226

Query: 343 ----LNFPRI 326
               +  PR+
Sbjct: 227 TVYTITIPRL 236


>tr|Q5C5K7|Q5C5K7_SCHJA SJCHGC05489 protein (Fragment)
           OS=Schistosoma japonicum PE=2 SV=2
          Length = 290

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +1

Query: 73  PNTDGGSNPRKVSGTKVVLHFRNKSPDPLLSTKRKQKQPGRESLIWTISLPLRTKWRRNR 252
           P+ DG SN    + T  + + R    D L + KRK+  PG       +    R+ +R   
Sbjct: 48  PSHDGDSNINNETATSALPNLRTMLSDELQTEKRKRGSPG------PVLTDFRSSYRHTN 101

Query: 253 SSYRD 267
           S Y+D
Sbjct: 102 SGYKD 106


>tr|Q4RGF6|Q4RGF6_TETNG Chromosome 18 SCAF15100, whole genome
           shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00034825001 PE=4 SV=1
          Length = 366

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 73  PNTDGGSNPRKVSGTKVVLHFRNKS---PDPLLSTKRKQKQP 189
           P  DGGS PRKV G +  L F ++S   P P+  T RK+K+P
Sbjct: 286 PLADGGSRPRKV-GYQRTLVFISRSVRHPHPIYLTDRKKKKP 326


>tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_071360 PE=4 SV=1
          Length = 464

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +2

Query: 113 EQKSSCISGISLPTPCFPPRESKNNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASV 292
           E +  C+S  + P+   P   SK   GG    G+  C +  +  ET  R   R  P+AS+
Sbjct: 46  ELQKQCLSSSAAPSFSSPFSSSKPASGGSKRSGRRRCGAGAA--ETAERPSARAAPLASL 103

Query: 293 SPEAESIRR 319
           SP A ++ R
Sbjct: 104 SPAASALSR 112