BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944231|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_G04, 5'
         (250 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12650|SPIKE_IBVK Spike glycoprotein OS=Avian infectious bron...    32   1.3  

>sp|P12650|SPIKE_IBVK Spike glycoprotein OS=Avian infectious
           bronchitis virus (strain KB8523) GN=S PE=3 SV=1
          Length = 1162

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +2

Query: 65  TIFIN*LLHKTNCCRVAEKLLSHNIEILLMWN*RLFFNLTLSIMLY 202
           T+F+    +K   C +   L  H+I +  M N +LF+NLT+S+  Y
Sbjct: 108 TVFVT-HCYKHGGCPITGMLQQHSIRVSAMKNGQLFYNLTVSVAKY 152

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944231|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_G04, 5'
         (250 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******