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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944234
Clone id YMU02A01NGRL0005_G07
Library
Length 167
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_G07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
ACACCAATTTGTACCAAGAGGCGCGTGCACAAAATTGTGCATCTCACCTTGGAAGTCATT
ATTTGTATACGAAAGTAGTGAGCCTGACTATTGTGTATACTTCCTTTGGCCAGTAATTTA
GAAAAGCCACTGGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P22149
Definition sp|P22149|AFT1_YEAST Iron-regulated transcriptional activator AFT1 OS=Saccharomyces cerevisiae
Align length 20
Score (bit) 29.6
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944234|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_G07, 5'
         (137 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22149|AFT1_YEAST Iron-regulated transcriptional activator AF...    30   4.8  

>sp|P22149|AFT1_YEAST Iron-regulated transcriptional activator AFT1
           OS=Saccharomyces cerevisiae GN=AFT1 PE=1 SV=2
          Length = 690

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 78  LLSYTNNDFQGEMHNFVHAP 19
           L + TNN+F+GE  +FVH+P
Sbjct: 465 LTTNTNNEFEGESDDFVHSP 484
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944234|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_G07, 5'
         (137 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******