BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944240|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_G15, 5'
         (202 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5DRB5|PCDG5_PANTR Protocadherin gamma-A5 OS=Pan troglodytes ...    30   3.8  
sp|Q9Y5G8|PCDG5_HUMAN Protocadherin gamma-A5 OS=Homo sapiens GN=...    30   4.9  
sp|Q9FFT9|RH32_ARATH Probable DEAD-box ATP-dependent RNA helicas...    29   6.4  

>sp|Q5DRB5|PCDG5_PANTR Protocadherin gamma-A5 OS=Pan troglodytes
           GN=PCDHGA5 PE=3 SV=1
          Length = 931

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 151 TKKKTNESKYRLALIKLTSQRISETIPPTLCSLFIHHPGASGVCGDV 11
           T +  N++   + L  LTS    + +P T+ +LF  H G SG  G++
Sbjct: 336 TVQDVNDNAPEVILTSLTSSLSEDCLPGTVIALFSVHDGDSGENGEI 382


>sp|Q9Y5G8|PCDG5_HUMAN Protocadherin gamma-A5 OS=Homo sapiens
           GN=PCDHGA5 PE=2 SV=1
          Length = 931

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 151 TKKKTNESKYRLALIKLTSQRISETIPPTLCSLFIHHPGASGVCGDV 11
           T +  N++   + L  LTS    + +P T+ +LF  H G SG  G++
Sbjct: 336 TVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEI 382


>sp|Q9FFT9|RH32_ARATH Probable DEAD-box ATP-dependent RNA helicase
           32 OS=Arabidopsis thaliana GN=RH32 PE=3 SV=1
          Length = 739

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -1

Query: 160 QEKTKKKTNESKYRLALIKLTSQRISETIPPTLCSLFIHHPGASGV 23
           +EK  +K  E+K  + LIK  +Q++ E +   L +L + +P   GV
Sbjct: 426 EEKMIEKLQEAKVPIKLIKANNQKLQE-VSRLLAALLVKYPDLQGV 470

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944240|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_G15, 5'
         (202 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******