DK944257 [AcEST]

DK944257
Clone id	YMU02A01NGRL0005_H12
Library	YMU02
Length	336
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_H12. 5' end sequence.
Accession	DK944257
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL2784Contig1
Sequence	CAGTCCACGAGAACTAAGTAACAGGAACTCTGGAATGCTCGATTTGCTTAGCCCAAAAAG TTGTAAGGAGGCACCTTAAATCCCACATTTTTGTGGTTTTTCCTCGATTGCTAATTTTGG TAGTTGAGGCAGGTATTGATATGGAAGCTTGTAGCTATTTTTCAGCTCGTTAAAATTTTG AGATGAGTCTAGCCTGTTTTGCGGCTTGTTTGGGCAGTTGAGCCATCTGTATCATTGGTG CTGCCTGCCAGAAAACCTTGAGCATGTTATTTTCGGTATATGCACACACTAAAGAATTTG CTCTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q2EI21
Definition	sp\|Q2EI21\|RESTA_XENLA RE1-silencing transcription factor A OS=Xenopus laevis
Align length	48
Score (bit)	30.4
E-value	2.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944257\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_H12, 5' (307 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q2EI21\|RESTA_XENLA RE1-silencing transcription factor A OS=Xe... 30 2.9 sp\|Q9PVG3\|RESTB_XENLA RE1-silencing transcription factor B (Frag... 30 3.8 >sp\|Q2EI21\|RESTA_XENLA RE1-silencing transcription factor A OS=Xenopus laevis GN=rest-A PE=2 SV=1 Length = 1501 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +3 Query: 33 ECSICLAQKVVRRHLKSHIFVVFPRLLILVVEAGIDMEACSYFSARN 176 +C+IC V H K H+ +PR+L + CSYFS R N Sbjct: 247 KCTICTYSTVSEYHWKKHLRNHYPRILYTCSQ-------CSYFSDRKN 287 >sp\|Q9PVG3\|RESTB_XENLA RE1-silencing transcription factor B (Fragment) OS=Xenopus laevis GN=rest-B PE=2 SV=1 Length = 529 Score = 30.0 bits (66), Expect = 3.8 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +3 Query: 33 ECSICLAQKVVRRHLKSHIFVVFPRLLILVVEAGIDMEACSYFSARN 176 +C+IC V H K H+ +PR+L + CSYFS R N Sbjct: 245 KCTICTYTTVSEYHWKKHLRNHYPRILYTCSQ-------CSYFSDRKN 285
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A6QRK3
Definition	tr\|A6QRK3\|A6QRK3_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24)
Align length	33
Score (bit)	33.5
E-value	5.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944257\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_H12, 5' (307 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A6QRK3\|A6QRK3_AJECN Predicted protein OS=Ajellomyces capsulat... 33 5.5 >tr\|A6QRK3\|A6QRK3_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_00009 PE=4 SV=1 Length = 270 Score = 33.5 bits (75), Expect = 5.5 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +3 Query: 39 SICLAQKVVRRHLKSHIFVVFPRLLILVVEAGI 137 S+ L Q++VRR + HI++VFPR + +E GI Sbjct: 12 SLTLEQELVRRWFRIHIYLVFPRDYLTSLETGI 44