DK944262
Clone id YMU02A01NGRL0005_H20
Library
Length 332
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_H20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGGCAGCCTAGTGTATTTTGACTTGTAGCCTAGAGTTTTTCCAAGCTGGAGAGATTTTAG
TTGAGACACAGATGAGGCATTTTTCTTTTGCCTTAGCCTTGATCTAAAAATTTTACTCCG
TGTTAGACTCTTGTGAAGGTATAAGGGGTCAGATTGTTTCTATCTGCTTTTTCGGTCATC
TCAATATGCCAATTCTCTCAAGTTCTGTGTCCCTTTAAGAGTTTTACCTTTCATGACAAG
AAACTTTGTTTAGTTGAATTGCGACTTACTGTCAGTTTACATTGTAAGCTGTTCAGAATT
GTCNAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P14810
Definition sp|P14810|RK35_CYAPA 50S ribosomal protein L35, cyanelle OS=Cyanophora paradoxa
Align length 45
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944262|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_H20, 5'
(304 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P14810|RK35_CYAPA 50S ribosomal protein L35, cyanelle OS=Cyan... 30 2.9

>sp|P14810|RK35_CYAPA 50S ribosomal protein L35, cyanelle
OS=Cyanophora paradoxa GN=rpl35 PE=3 SV=1
Length = 65

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2

Query: 135 HKSLTRSKIFRSRLRQKKNASSVSQLKSLQLGKTLGYKSKYTRLP 1
+K ++R K FRS L QKK+ + QL + + K Y LP
Sbjct: 19 NKKISRRKAFRSHLLQKKSTNRKRQLSQVVIASPGDTKKIYLMLP 63


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944262|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_H20, 5'
(304 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******