DK944264 |
Clone id |
YMU02A01NGRL0005_H22 |
Library |
YMU02 |
Length |
589 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_H22. 5' end sequence. |
Accession |
DK944264 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1432Contig1 |
Sequence |
GAAGATGGCTCGTGTGAAATTGGGTAGCGGGCTGTGTCTATCATCAGCACGCTTCTCTGC CCTGGTATCTTCGTTGCCGCCGCCAGCAAGATTAACACGAAGAAGGGGAGGGTCTTTATT TCGGTCTCTACGGGCGCAGGCAGGCCAATCTGAGACGGCAGGGGAGGTAGGCACGGCAGG CTTGGTGGCCATCGCTGCAGGCTTGGTGGCGAACCCTGTGGTGGGCTGGTCCCTCTTCAC CCTAAAGTCAACAGGGTGTGGCCTGCCGCCTGGCCCCGGCGGCGCCATTGGAGCCTTGGA AGGAGTGAGCTACTTGGCCATTCTTGGCATCATCTCTTGGTCTGCCTACACCAAAATCAA GACAGGTTCTGGTCTGCCAAATGGGCCCTTTGGTCTTCTTGGTGCCGTTGAAGGCCTCTC ATACTTGTCTGTTCTTGCCATTGCCGTAATTTTTGGGTTGCAATTCCTGGATTATGGATA CATCCCCGGCCCAGTTCCGAGTGAGCAATGCTTTGGCTAGCGCTGGCATCGCAGGGTAAG ATCTTGAGCTGTTGTGATTGCCGTTGCCGGGGTTCCTCCTGTGTGTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P09193 |
Definition |
sp|P09193|PSBC_SYNY3 Photosystem II 44 kDa reaction center protein OS=Synechocystis sp. (strain PCC 6803) |
Align length |
37 |
Score (bit) |
31.6 |
E-value |
3.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q941E5 |
Definition |
tr|Q941E5|Q941E5_ARATH AT3g50680/T3A5_60 (Putative uncharacterized protein At3g50685) (Putative uncharacterized protein At3g50685/At3g50680) OS=Arabidopsis thaliana |
Align length |
101 |
Score (bit) |
142.0 |
E-value |
2.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944264|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_H22, 5' (589 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q941E5|Q941E5_ARATH AT3g50680/T3A5_60 (Putative uncharacteriz... 142 2e-32 tr|Q8LCA0|Q8LCA0_ARATH Putative uncharacterized protein OS=Arabi... 142 2e-32 tr|A9NRZ1|A9NRZ1_PICSI Putative uncharacterized protein OS=Picea... 141 2e-32 tr|A9T9J3|A9T9J3_PHYPA Predicted protein (Fragment) OS=Physcomit... 141 3e-32 tr|Q67YF1|Q67YF1_ARATH Putative uncharacterized protein At3g5068... 138 3e-31 tr|A7PUX1|A7PUX1_VITVI Chromosome chr4 scaffold_32, whole genome... 136 8e-31 tr|Q9SCQ8|Q9SCQ8_ARATH Putative uncharacterized protein T3A5.60 ... 121 3e-26 tr|B6SQZ8|B6SQZ8_MAIZE Putative uncharacterized protein OS=Zea m... 120 6e-26 tr|Q4VDD8|Q4VDD8_PINRE P-166-4_1 (Fragment) OS=Pinus resinosa GN... 119 1e-25 tr|Q8S5E8|Q8S5E8_ORYSA Putative uncharacterized protein OSJNBb00... 118 2e-25 tr|Q7XG51|Q7XG51_ORYSJ Os10g0213700 protein OS=Oryza sativa subs... 118 2e-25 tr|A2Z5W2|A2Z5W2_ORYSI Putative uncharacterized protein OS=Oryza... 118 2e-25 tr|A8HMR7|A8HMR7_CHLRE Predicted protein OS=Chlamydomonas reinha... 87 5e-16 tr|B7GBH0|B7GBH0_PHATR Predicted protein (Fragment) OS=Phaeodact... 85 3e-15 tr|B8C886|B8C886_THAPS Predicted protein OS=Thalassiosira pseudo... 81 5e-14 tr|A4SAY1|A4SAY1_OSTLU Predicted protein OS=Ostreococcus lucimar... 71 5e-11 tr|Q00W86|Q00W86_OSTTA Chromosome 14 contig 1, DNA sequence OS=O... 49 3e-04 tr|A4HZU8|A4HZU8_LEIIN 5'a2rel-related protein OS=Leishmania inf... 37 1.1 tr|A3TGC8|A3TGC8_9MICO Putative 3-hydroxyacyl-CoA dehydrogenase ... 36 1.9 tr|Q2I6P7|Q2I6P7_GONPO Photosystem II CP43 chlorophyll apoprotei... 35 2.4 tr|Q1JT89|Q1JT89_TOXGO Putative uncharacterized protein OS=Toxop... 35 2.4 tr|B6KQS3|B6KQS3_TOXGO Putative uncharacterized protein OS=Toxop... 35 2.4 tr|B4LRF6|B4LRF6_DROVI GJ17559 OS=Drosophila virilis GN=GJ17559 ... 35 4.1 tr|B6KLJ6|B6KLJ6_TOXGO DNA polymerase zeta catalytic subunit, pu... 34 5.3 tr|B4LA56|B4LA56_DROMO GI14484 OS=Drosophila mojavensis GN=GI144... 34 5.3 tr|Q4QBR3|Q4QBR3_LEIMA 5'a2rel-related protein OS=Leishmania maj... 34 5.4 tr|A1SC38|A1SC38_NOCSJ SMF family protein OS=Nocardioides sp. (s... 34 7.0 tr|Q47465|Q47465_ERWCA Pectate lyase OS=Erwinia carotovora GN=pe... 34 7.1 tr|Q9XQU9|Q9XQU9_HETTR PSII CP43 apoprotein OS=Heterocapsa triqu... 34 7.1 tr|Q8WIE5|Q8WIE5_AMPOP Photosystem II component PsbC OS=Amphidin... 34 7.1
>tr|Q941E5|Q941E5_ARATH AT3g50680/T3A5_60 (Putative uncharacterized protein At3g50685) (Putative uncharacterized protein At3g50685/At3g50680) OS=Arabidopsis thaliana GN=At3g50685/At3g50680 PE=2 SV=1 Length = 158
Score = 142 bits (357), Expect = 2e-32 Identities = 66/101 (65%), Positives = 77/101 (76%) Frame = +2
Query: 215 PVVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPFG 394 PV+GWSL+TLK+T VSYL ++GI+ WS YTK KTGSGLPNGPFG Sbjct: 58 PVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFG 117
Query: 395 LLGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 LLGAVEGLSYLSVLAI V+FG+QFLD G +PGP+PS+QCFG Sbjct: 118 LLGAVEGLSYLSVLAILVVFGIQFLDNGSVPGPLPSDQCFG 158
>tr|Q8LCA0|Q8LCA0_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 158
Score = 142 bits (357), Expect = 2e-32 Identities = 66/101 (65%), Positives = 77/101 (76%) Frame = +2
Query: 215 PVVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPFG 394 PV+GWSL+TLK+T VSYL ++GI+ WS YTK KTGSGLPNGPFG Sbjct: 58 PVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFG 117
Query: 395 LLGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 LLGAVEGLSYLSVLAI V+FG+QFLD G +PGP+PS+QCFG Sbjct: 118 LLGAVEGLSYLSVLAILVVFGIQFLDNGSVPGPLPSDQCFG 158
>tr|A9NRZ1|A9NRZ1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 166
Score = 141 bits (356), Expect = 2e-32 Identities = 62/102 (60%), Positives = 76/102 (74%) Frame = +2
Query: 212 NPVVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPF 391 NPVVGWSL+TLK+T +S+L + G+I WS YTK+KTGSGLP+GPF Sbjct: 65 NPVVGWSLYTLKTTGCGLPPGPGGALGALEGISFLVVFGLIGWSVYTKVKTGSGLPSGPF 124
Query: 392 GLLGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 GLLGAVEGLSYL+++ + +FGLQ+LDYGYIPGP P EQCFG Sbjct: 125 GLLGAVEGLSYLTLVGVVAVFGLQYLDYGYIPGPTPGEQCFG 166
>tr|A9T9J3|A9T9J3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19071 PE=4 SV=1 Length = 111
Score = 141 bits (355), Expect = 3e-32 Identities = 67/102 (65%), Positives = 78/102 (76%) Frame = +2
Query: 212 NPVVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPF 391 NPVV WSL+TLK+T VSYL I+G I WSAYTK+KTGSGLP+GP+ Sbjct: 10 NPVVTWSLYTLKTTGCGLPPGPGGALGAIEGVSYLVIVGTIGWSAYTKVKTGSGLPSGPY 69
Query: 392 GLLGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 GLLGAVEGLSYLS+LAI V+FGLQ+LD G+IPGPVPS+ CFG Sbjct: 70 GLLGAVEGLSYLSLLAILVVFGLQYLDLGFIPGPVPSDMCFG 111
>tr|Q67YF1|Q67YF1_ARATH Putative uncharacterized protein At3g50685 OS=Arabidopsis thaliana GN=At3g50685 PE=2 SV=1 Length = 158
Score = 138 bits (347), Expect = 3e-31 Identities = 65/101 (64%), Positives = 76/101 (75%) Frame = +2
Query: 215 PVVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPFG 394 PV+GWSL+TLK+T VSYL ++GI+ WS YTK KTGSGLPNGPFG Sbjct: 58 PVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFG 117
Query: 395 LLGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 LLGAVEGLSYLSVLAI V+FG+QFLD G +PGP+PS+Q FG Sbjct: 118 LLGAVEGLSYLSVLAILVVFGIQFLDNGSVPGPLPSDQSFG 158
>tr|A7PUX1|A7PUX1_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024960001 PE=4 SV=1 Length = 303
Score = 136 bits (343), Expect = 8e-31 Identities = 63/101 (62%), Positives = 77/101 (76%) Frame = +2
Query: 215 PVVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPFG 394 PV+ WSL+TLK+T VSYL ++GI++WS+YTK KTGSGLPNGPFG Sbjct: 203 PVIAWSLYTLKTTGCGLPPGPGGSIGALEGVSYLIVVGIVAWSSYTKYKTGSGLPNGPFG 262
Query: 395 LLGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 LLGAVEGLSYLS+LAI V+FG+QF + G IPGP+PS+QCFG Sbjct: 263 LLGAVEGLSYLSLLAILVVFGVQFFEQGSIPGPLPSDQCFG 303
>tr|Q9SCQ8|Q9SCQ8_ARATH Putative uncharacterized protein T3A5.60 OS=Arabidopsis thaliana GN=T3A5.60 PE=4 SV=1 Length = 319
Score = 121 bits (304), Expect = 3e-26 Identities = 58/91 (63%), Positives = 67/91 (73%) Frame = +2
Query: 215 PVVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPFG 394 PV+GWSL+TLK+T VSYL ++GI+ WS YTK KTGSGLPNGPFG Sbjct: 58 PVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFG 117
Query: 395 LLGAVEGLSYLSVLAIAVIFGLQFLDYGYIP 487 LLGAVEGLSYLSVLAI V+FG+QFLD G +P Sbjct: 118 LLGAVEGLSYLSVLAILVVFGIQFLDNGSVP 148
>tr|B6SQZ8|B6SQZ8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 170
Score = 120 bits (301), Expect = 6e-26 Identities = 55/100 (55%), Positives = 69/100 (69%) Frame = +2
Query: 218 VVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPFGL 397 VV WSL+TL +T VSYL + G++ WS TK++TGSGLP GP+GL Sbjct: 71 VVAWSLYTLNTTGCGLPPGPGGALGAAEGVSYLVVAGLVGWSVTTKVRTGSGLPAGPYGL 130
Query: 398 LGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 LGA EG++YL++ AIAV+FGLQF G IPGP+PSEQCFG Sbjct: 131 LGAAEGVAYLTIAAIAVVFGLQFFQQGSIPGPLPSEQCFG 170
>tr|Q4VDD8|Q4VDD8_PINRE P-166-4_1 (Fragment) OS=Pinus resinosa GN=p-166-4 PE=2 SV=1 Length = 79
Score = 119 bits (298), Expect = 1e-25 Identities = 49/71 (69%), Positives = 61/71 (85%) Frame = +2
Query: 305 VSYLAILGIISWSAYTKIKTGSGLPNGPFGLLGAVEGLSYLSVLAIAVIFGLQFLDYGYI 484 +S+L + G+I WS YTK+KTGSGLP+GPFGLLGA EGLSYL+++ I +FGLQ+LDYGYI Sbjct: 9 ISFLVVFGLIGWSVYTKVKTGSGLPSGPFGLLGAAEGLSYLTLVGIVAVFGLQYLDYGYI 68
Query: 485 PGPVPSEQCFG 517 PGP P +QCFG Sbjct: 69 PGPTPGDQCFG 79
>tr|Q8S5E8|Q8S5E8_ORYSA Putative uncharacterized protein OSJNBb0047B19.16 OS=Oryza sativa GN=OSJNBb0047B19.16 PE=4 SV=1 Length = 163
Score = 118 bits (296), Expect = 2e-25 Identities = 55/100 (55%), Positives = 68/100 (68%) Frame = +2
Query: 218 VVGWSLFTLKSTXXXXXXXXXXXXXXXXXVSYLAILGIISWSAYTKIKTGSGLPNGPFGL 397 VV WSL+TLK+T VSYL + +I WS TK++TGSGLP GPFGL Sbjct: 64 VVAWSLYTLKTTGCGLPPGPGGALGAAEGVSYLVVAALIGWSLTTKVRTGSGLPAGPFGL 123
Query: 398 LGAVEGLSYLSVLAIAVIFGLQFLDYGYIPGPVPSEQCFG 517 LGA EG+SYL+ AIAV+FG QF + G +PGP+PS+QCFG Sbjct: 124 LGAAEGVSYLAAAAIAVVFGFQFFEVGSLPGPLPSDQCFG 163
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