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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944273
Clone id YMU02A01NGRL0005_I10
Library
Length 440
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_I10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GGTTCTGACACCTTTTTGTCGTTGCCCTACACTGAATTTTGAATTGCAAATTCCTTTTTA
CCTTCTACACTTCATTTTACATGCTACAAAGTCTTACTCTTTCAGAATGTCATGGACATG
GTGTGACACCCTATGCTGGTTTAGTACTTTAGCGCGTCACCAATAATCACTGTTTCGGCC
ACTTGTTGAATCACTACATGCAGGCTTGATACTCAAAGTACAATCCAAATCCAGTGCTCC
ATTTATTTTTATCTTCCTTGGAGCGTAACCTCCTAAAGACAACCAGTTGGATGTACAAGA
ATGATCTTCGTGATGAAGATCAGAAGGTATGGTTGAGCTGATAGAGGGTTTCTGGTTAAA
AGTCTTCGAAGCTATGAATTATATAATGAGCTGCAGTGATTTGCTGGTAGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8T191
Definition sp|Q8T191|UGGG_DICDI Probable UDP-glucose:glycoprotein glucosyltransferase A OS=Dictyostelium discoideum
Align length 34
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944273|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_I10, 5'
         (410 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8T191|UGGG_DICDI Probable UDP-glucose:glycoprotein glucosylt...    31   2.2  
sp|P35357|OPSB_GECGE Blue-sensitive opsin P467 OS=Gecko gecko PE...    30   2.9  
sp|Q5KEQ1|CET1_CRYNE mRNA-capping enzyme subunit beta OS=Cryptoc...    30   3.8  
sp|Q09356|YRZ4_CAEEL Uncharacterized protein T19H5.4 OS=Caenorha...    30   5.0  
sp|Q6FNC6|YPP1_CANGA Cargo-transport protein YPP1 OS=Candida gla...    30   5.0  
sp|P39683|NPT1_YEAST Nicotinate phosphoribosyltransferase OS=Sac...    30   5.0  
sp|Q09140|UGGG_SCHPO UDP-glucose:glycoprotein glucosyltransferas...    29   8.5  
sp|P30771|NAM7_YEAST ATP-dependent helicase NAM7 OS=Saccharomyce...    29   8.5  
sp|Q9ERQ6|CSPG5_RAT Chondroitin sulfate proteoglycan 5 OS=Rattus...    29   8.5  
sp|O84288|CLPC_CHLTR Probable ATP-dependent Clp protease ATP-bin...    29   8.5  

>sp|Q8T191|UGGG_DICDI Probable UDP-glucose:glycoprotein
            glucosyltransferase A OS=Dictyostelium discoideum GN=ggtA
            PE=1 SV=2
          Length = 1681

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 35   NFELQIPFYLLHFILHATKSYSFRMSWTWCDTLC 136
            N +  +P YL H++    + +S    W WC+T C
Sbjct: 1563 NLDQDLPNYLQHYV----RIHSLPQEWLWCETWC 1592


>sp|P35357|OPSB_GECGE Blue-sensitive opsin P467 OS=Gecko gecko PE=1
           SV=1
          Length = 355

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +3

Query: 126 TPYAGLVL*RVTNNHCFGHLLNHYMQA*YSKYNP--NPVLHLFLSSLERNLLKTTSWMYK 299
           TPYA   +   TN      +    + A +SK +   NP++++ L+   RN + TT    K
Sbjct: 266 TPYAATAIWIFTNRGAAFSVTFMTIPAFFSKSSSIYNPIIYVLLNKQFRNCMVTTICCGK 325

Query: 300 NDLRDED 320
           N   DED
Sbjct: 326 NPFGDED 332


>sp|Q5KEQ1|CET1_CRYNE mRNA-capping enzyme subunit beta
           OS=Cryptococcus neoformans GN=CET1 PE=3 SV=1
          Length = 397

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
 Frame = -3

Query: 348 PSISSTIP----SDLHHEDHSCTSNWLSLGGYAPRKIKINGALDLDCTLSIKPACSDSTS 181
           P I   IP    S  H  D S  +N    G Y PR+   +   + +     +   S S S
Sbjct: 35  PDIDPDIPLARMSSAHESDPSEQANATQSGDYVPRQRVGSQGAEQEGQSRKRARTSPSHS 94

Query: 180 GRNSDYW*RAKVLNQHRVSHHVH 112
           G N  Y  R +    H   H+ H
Sbjct: 95  GGNGSYVPRQRTEESHHSHHNGH 117


>sp|Q09356|YRZ4_CAEEL Uncharacterized protein T19H5.4
           OS=Caenorhabditis elegans GN=T19H5.4 PE=2 SV=1
          Length = 313

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/63 (22%), Positives = 34/63 (53%)
 Frame = +2

Query: 191 SLHAGLILKVQSKSSAPFIFIFLGA*PPKDNQLDVQE*SS**RSEGMVELIEGFWLKVFE 370
           S+H  L+ ++   + +PF F F    PPK+ + +        ++  ++ L++  +L V++
Sbjct: 68  SMHLSLLSQLAPPNFSPFFFFFSNRSPPKERRANP-------KALCVLPLLDSIYLSVYK 120

Query: 371 AMN 379
           ++N
Sbjct: 121 SLN 123


>sp|Q6FNC6|YPP1_CANGA Cargo-transport protein YPP1 OS=Candida
           glabrata GN=YPP1 PE=3 SV=1
          Length = 788

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3

Query: 288 NWLSLGGYAPRKIKINGALDLDCTL 214
           N L LGG   +K+ ING  DLD TL
Sbjct: 568 NTLFLGGANQKKVTINGVYDLDMTL 592


>sp|P39683|NPT1_YEAST Nicotinate phosphoribosyltransferase
           OS=Saccharomyces cerevisiae GN=NPT1 PE=1 SV=3
          Length = 429

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = -3

Query: 336 STIPSDLHHEDHSCTSNWLSLGGYAPRKIKINGALDLDCTL-SIKPACSDSTSGRNSDYW 160
           ++I  D  H + +    W++  G     + +      D  L S +P  SD+  G   D  
Sbjct: 239 ASISEDYLHANKNAMDCWINTFGAKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSG 298

Query: 159 *RAKVLNQHRVSHHVHDILK 100
               V    ++SHH HD+LK
Sbjct: 299 --DPVEYTKKISHHYHDVLK 316


>sp|Q09140|UGGG_SCHPO UDP-glucose:glycoprotein glucosyltransferase
            OS=Schizosaccharomyces pombe GN=gpt1 PE=1 SV=2
          Length = 1448

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 35   NFELQIPFYLLHFILHATKSYSFRMSWTWCDTLC 136
            N +  +P +L H I      YS    W WC+T C
Sbjct: 1351 NLDQDLPNHLQHLI----PIYSLPQDWLWCETWC 1380


>sp|P30771|NAM7_YEAST ATP-dependent helicase NAM7 OS=Saccharomyces
           cerevisiae GN=NAM7 PE=1 SV=1
          Length = 971

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 267 YAPRKIKINGALDLDCTLSIKPACSDSTSGRNSDY 163
           Y  + +++NG+LD D  + ++ A  D+  GR  DY
Sbjct: 738 YILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772


>sp|Q9ERQ6|CSPG5_RAT Chondroitin sulfate proteoglycan 5 OS=Rattus
           norvegicus GN=Cspg5 PE=1 SV=1
          Length = 571

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -3

Query: 369 SKTFNQKPSISSTIPSDLHHEDHSCTSNWLSLGGYAPRKIKINGALDLDCTLSIKPA 199
           S T   KPS+   +P ++  E       WL+LGG  P   +      L  TL  +PA
Sbjct: 160 SPTLRDKPSLVPELPKEIPLEV------WLNLGGSTPDPQRPEPTFPLQGTLETQPA 210


>sp|O84288|CLPC_CHLTR Probable ATP-dependent Clp protease
           ATP-binding subunit OS=Chlamydia trachomatis GN=clpC
           PE=3 SV=1
          Length = 854

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = -3

Query: 366 KTFN-QKPSISSTIPSDLHHEDHSCTSNWL---SLGGYAPRKIKINGALDLDCTLSIKPA 199
           +TFN Q P  SS  P + +    S +S+ L   +LGG  P K+    A   D T   K +
Sbjct: 144 ETFNLQLPPSSSITPRNTNSSSSSKSSSPLGGHTLGGDKPEKLSALKAYGYDLTEMFKES 203

Query: 198 CSDSTSGRNSD 166
             D   GR+++
Sbjct: 204 RLDPVIGRSAE 214
tr_hit_id Q0CCX6
Definition tr|Q0CCX6|Q0CCX6_ASPTN Predicted protein OS=Aspergillus terreus (strain NIH 2624)
Align length 47
Score (bit) 33.1
E-value 7.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944273|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_I10, 5'
         (410 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0CCX6|Q0CCX6_ASPTN Predicted protein OS=Aspergillus terreus ...    33   7.1  
tr|Q00292|Q00292_ASPTE Dihydrogeodin oxidase OS=Aspergillus terr...    33   7.1  
tr|A1A1Q1|A1A1Q1_BIFAA Putative uncharacterized protein yxjG_1 O...    33   9.3  
tr|A0FEM3|A0FEM3_STRPU Receptor for egg jelly 5 OS=Strongylocent...    33   9.3  

>tr|Q0CCX6|Q0CCX6_ASPTN Predicted protein OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_08458 PE=4 SV=1
          Length = 605

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -3

Query: 324 SDLHHEDHSCTSNWLSLGGYA---PRKIKINGALDLDCTLSIKPACS 193
           +D +HED + T NW+SL G     P    +NG    DC   + PAC+
Sbjct: 196 TDWYHED-AFTLNWISLAGQLAPIPVSTLLNGKGTYDCDPGLDPACT 241


>tr|Q00292|Q00292_ASPTE Dihydrogeodin oxidase OS=Aspergillus terreus
           GN=DHGO PE=4 SV=1
          Length = 605

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -3

Query: 324 SDLHHEDHSCTSNWLSLGGYA---PRKIKINGALDLDCTLSIKPACS 193
           +D +HED + T NW+SL G     P    +NG    DC   + PAC+
Sbjct: 196 TDWYHED-AFTLNWISLAGQLAPIPVSTLLNGKGTYDCDPGLDPACT 241


>tr|A1A1Q1|A1A1Q1_BIFAA Putative uncharacterized protein yxjG_1
           OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM
           20083) GN=yxjG_1 PE=3 SV=1
          Length = 403

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = -3

Query: 345 SISSTIPSDLHHEDHSCTSN----WLSLGGYAPRKIKINGALDLD 223
           ++ S  P DL    H C  N    WLS GGYAP   K+ G  ++D
Sbjct: 260 AVISDQPDDLVINTHVCRGNFHSTWLSSGGYAPVAAKLFGEENVD 304


>tr|A0FEM3|A0FEM3_STRPU Receptor for egg jelly 5 OS=Strongylocentrotus
            purpuratus GN=REJ5 PE=2 SV=1
          Length = 3716

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 201  QA*YSKYNPNPVLHLFLSSLERNLLKTTSWMYKNDLRD 314
            Q+ +SK N NPV+ +F+  +    L    W YK D RD
Sbjct: 2581 QSAFSKLNENPVVFVFMVCMFAVYLTVVLWAYKKDQRD 2618