DK944281 |
Clone id |
YMU02A01NGRL0005_I20 |
Library |
YMU02 |
Length |
483 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_I20. 5' end sequence. |
Accession |
DK944281 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL460Contig1 |
Sequence |
GGGTTCAACGTTCTTCTTCGTTAGAGCAATTGTAGCAAGCTCTTTCTCACGTCTGCCTTT GCTGGGAAGCGAATCATGGCCCCAAAGAAGGATAAGGCCTCCTCAGCCCCCGCGAAGCCC GCTAAGAGCAGCGGAGGAGGCGGCAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAG AAAGAGAAGGTCAACAATATGGTTTTGTTTGATCAGGGTACTTATGACAAGCTGCTGACT GAGGTTCCAAAGTACAAACTTATTACCCCATCCATCTTGTCAGATCGACTAAGGATCAAT GGGTCACTTGCTCGCAAAGCTATTATGGACTTGATGGCCAGAGGCACCATTAGGCTTGTA GCTGCTCATTCAAATCAGCAAATTTACACTCGGGCTACCAATACTTAGGAGGCTATTTTC TCTATGGAGAACTCTGTAATTGATTCAGTTTTGAGAGGCAATGGTTATTGGCGGAATTTT TCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SIK2 |
Definition |
sp|Q9SIK2|RS252_ARATH 40S ribosomal protein S25-2 OS=Arabidopsis thaliana |
Align length |
72 |
Score (bit) |
125.0 |
E-value |
8.0e-29 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7FGM7 |
Definition |
tr|B7FGM7|B7FGM7_MEDTR Putative uncharacterized protein OS=Medicago truncatula |
Align length |
72 |
Score (bit) |
131.0 |
E-value |
2.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944281|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_I20, 5' (483 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7FGM7|B7FGM7_MEDTR Putative uncharacterized protein OS=Medic... 131 2e-29 tr|B7FH10|B7FH10_MEDTR Putative uncharacterized protein OS=Medic... 130 4e-29 tr|A9S9T4|A9S9T4_PHYPA Predicted protein (Fragment) OS=Physcomit... 129 5e-29 tr|A9RPL4|A9RPL4_PHYPA Predicted protein OS=Physcomitrella paten... 129 5e-29 tr|A9NKH7|A9NKH7_PICSI Putative uncharacterized protein OS=Picea... 128 1e-28 tr|A7QUW2|A7QUW2_VITVI Chromosome chr13 scaffold_181, whole geno... 128 1e-28 tr|A9RYT1|A9RYT1_PHYPA Predicted protein OS=Physcomitrella paten... 127 3e-28 tr|A9RSW5|A9RSW5_PHYPA Predicted protein OS=Physcomitrella paten... 127 3e-28 tr|A7QL29|A7QL29_VITVI Chromosome undetermined scaffold_116, who... 126 5e-28 tr|Q2V471|Q2V471_ARATH Uncharacterized protein At2g21580.2 OS=Ar... 125 8e-28 tr|A9NT78|A9NT78_PICSI Putative uncharacterized protein OS=Picea... 125 8e-28 tr|B0BLI2|B0BLI2_LOTJA CM0216.350.nc protein (Fragment) OS=Lotus... 125 1e-27 tr|B3H4B6|B3H4B6_ARATH Uncharacterized protein At4g39200.2 OS=Ar... 125 1e-27 tr|Q6VEV1|Q6VEV1_SOYBN 40S ribosomal protein S25 (Fragment) OS=G... 124 2e-27 tr|A9PAD1|A9PAD1_POPTR Putative uncharacterized protein OS=Popul... 124 2e-27 tr|B6SMC3|B6SMC3_MAIZE 40S ribosomal protein S25-1 OS=Zea mays P... 123 4e-27 tr|A9PDP8|A9PDP8_POPTR Putative uncharacterized protein OS=Popul... 122 1e-26 tr|B4FSL2|B4FSL2_MAIZE Putative uncharacterized protein OS=Zea m... 121 1e-26 tr|B6SX33|B6SX33_MAIZE 40S ribosomal protein S25-1 OS=Zea mays P... 120 3e-26 tr|B0FSK2|B0FSK2_9MAGN Ribosomal protein S25 OS=Adonis aestivali... 120 3e-26 tr|A5BRH6|A5BRH6_VITVI Putative uncharacterized protein OS=Vitis... 120 3e-26 tr|B4FXK8|B4FXK8_MAIZE 40S ribosomal protein S25-1 OS=Zea mays P... 119 6e-26 tr|B4FG22|B4FG22_MAIZE 40S ribosomal protein S25-1 OS=Zea mays P... 119 7e-26 tr|Q6YZI2|Q6YZI2_ORYSJ Os08g0559200 protein OS=Oryza sativa subs... 118 1e-25 tr|A3BVR1|A3BVR1_ORYSJ Putative uncharacterized protein OS=Oryza... 118 1e-25 tr|Q652P8|Q652P8_ORYSJ Os09g0568800 protein OS=Oryza sativa subs... 115 1e-24 tr|A2Z480|A2Z480_ORYSI Putative uncharacterized protein OS=Oryza... 115 1e-24 tr|A7P8X9|A7P8X9_VITVI Chromosome chr3 scaffold_8, whole genome ... 114 2e-24 tr|Q53QG2|Q53QG2_ORYSJ cDNA clone:001-018-C09, full insert seque... 110 4e-23 tr|Q0IUI8|Q0IUI8_ORYSJ Os11g0153800 protein (Fragment) OS=Oryza ... 110 4e-23
>tr|B7FGM7|B7FGM7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 107
Score = 131 bits (329), Expect = 2e-29 Identities = 65/72 (90%), Positives = 69/72 (95%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQGTYDKLLTE PKYKLITPS+LSDRLRINGSLAR+AI DLMARG IRLV+AH Sbjct: 36 VNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRINGSLARRAIRDLMARGLIRLVSAH 95
Query: 370 SNQQIYTRATNT 405 S+QQIYTRATNT Sbjct: 96 SSQQIYTRATNT 107
>tr|B7FH10|B7FH10_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 107
Score = 130 bits (326), Expect = 4e-29 Identities = 64/72 (88%), Positives = 69/72 (95%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQGTYDKLLTE PKYKLITPS+LSDRLRINGSLAR+AI DLMA+G IRLV+AH Sbjct: 36 VNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRINGSLARRAIRDLMAKGLIRLVSAH 95
Query: 370 SNQQIYTRATNT 405 S+QQIYTRATNT Sbjct: 96 SSQQIYTRATNT 107
>tr|A9S9T4|A9S9T4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126254 PE=4 SV=1 Length = 83
Score = 129 bits (325), Expect = 5e-29 Identities = 63/72 (87%), Positives = 70/72 (97%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQGTYDKLL+EVPK+KL+TPS+LSDRLRI GSLARKAI +LMA+GTIRLVAAH Sbjct: 12 VNNMVLFDQGTYDKLLSEVPKFKLVTPSVLSDRLRITGSLARKAIKELMAKGTIRLVAAH 71
Query: 370 SNQQIYTRATNT 405 +NQQIYTRATNT Sbjct: 72 ANQQIYTRATNT 83
>tr|A9RPL4|A9RPL4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177001 PE=4 SV=1 Length = 108
Score = 129 bits (325), Expect = 5e-29 Identities = 63/72 (87%), Positives = 70/72 (97%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQGTYDKLL+EVPK+KL+TPS+LSDRLRI GSLARKAI +LMA+GTIRLVAAH Sbjct: 37 VNNMVLFDQGTYDKLLSEVPKFKLVTPSVLSDRLRITGSLARKAIKELMAKGTIRLVAAH 96
Query: 370 SNQQIYTRATNT 405 +NQQIYTRATNT Sbjct: 97 ANQQIYTRATNT 108
>tr|A9NKH7|A9NKH7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 108
Score = 128 bits (322), Expect = 1e-28 Identities = 63/72 (87%), Positives = 69/72 (95%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQ TYDKLL+E PKYKLITPSILSDRLRINGSLARKAI DLMARG+IR+++AH Sbjct: 37 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIKDLMARGSIRMISAH 96
Query: 370 SNQQIYTRATNT 405 S+QQIYTRATNT Sbjct: 97 SSQQIYTRATNT 108
>tr|A7QUW2|A7QUW2_VITVI Chromosome chr13 scaffold_181, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007016001 PE=4 SV=1 Length = 110
Score = 128 bits (322), Expect = 1e-28 Identities = 63/71 (88%), Positives = 70/71 (98%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQGTYDKLL+EVPKYKLITPSILSDRLRINGSLAR+AI DLMARG+IR+V+AH Sbjct: 39 VNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRMVSAH 98
Query: 370 SNQQIYTRATN 402 ++QQIYTRATN Sbjct: 99 ASQQIYTRATN 109
>tr|A9RYT1|A9RYT1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_56445 PE=4 SV=1 Length = 108
Score = 127 bits (319), Expect = 3e-28 Identities = 62/72 (86%), Positives = 69/72 (95%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQ TYDKLL+EVPK+KL+TPS+LSDRLRI GSLARKAI +LMA+GTIRLVAAH Sbjct: 37 VNNMVLFDQATYDKLLSEVPKFKLVTPSVLSDRLRITGSLARKAIKELMAKGTIRLVAAH 96
Query: 370 SNQQIYTRATNT 405 +NQQIYTRATNT Sbjct: 97 ANQQIYTRATNT 108
>tr|A9RSW5|A9RSW5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_118815 PE=4 SV=1 Length = 108
Score = 127 bits (319), Expect = 3e-28 Identities = 62/72 (86%), Positives = 69/72 (95%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQ TYDKLL+EVPK+KL+TPS+LSDRLRI GSLARKAI +LMA+GTIRLVAAH Sbjct: 37 VNNMVLFDQATYDKLLSEVPKFKLVTPSVLSDRLRITGSLARKAIKELMAKGTIRLVAAH 96
Query: 370 SNQQIYTRATNT 405 +NQQIYTRATNT Sbjct: 97 ANQQIYTRATNT 108
>tr|A7QL29|A7QL29_VITVI Chromosome undetermined scaffold_116, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001420001 PE=4 SV=1 Length = 122
Score = 126 bits (317), Expect = 5e-28 Identities = 61/71 (85%), Positives = 69/71 (97%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQGTYDKLL EVPKYKLITPSILSDRLR+NGSLAR+AI DLMARG+IR+++AH Sbjct: 51 VNNMVLFDQGTYDKLLLEVPKYKLITPSILSDRLRVNGSLARQAIKDLMARGSIRMISAH 110
Query: 370 SNQQIYTRATN 402 ++QQIYTRATN Sbjct: 111 ASQQIYTRATN 121
>tr|Q2V471|Q2V471_ARATH Uncharacterized protein At2g21580.2 OS=Arabidopsis thaliana GN=At2g21580 PE=4 SV=1 Length = 107
Score = 125 bits (315), Expect = 8e-28 Identities = 61/72 (84%), Positives = 69/72 (95%) Frame = +1
Query: 190 VNNMVLFDQGTYDKLLTEVPKYKLITPSILSDRLRINGSLARKAIMDLMARGTIRLVAAH 369 VNNMVLFDQGTYDKLLTE PK+KLITPSILSDR+RINGSLAR+AI +LMA+G IR+V+AH Sbjct: 36 VNNMVLFDQGTYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAH 95
Query: 370 SNQQIYTRATNT 405 S+QQIYTRATNT Sbjct: 96 SSQQIYTRATNT 107
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