DK944297 |
Clone id |
YMU02A01NGRL0005_J15 |
Library |
YMU02 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_J15. 5' end sequence. |
Accession |
DK944297 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1390Contig1 |
Sequence |
GTGTTGAGAATTCAGTGACCTTCACTGGCCCTCTTGCAACTACCTCATTTAGCACTAGTG CTACGTTTGAGGTCAGGAGTCCAAAACGCGTGCAGATTAAATTTGAGGAAGGAGTGATTG GAACTCCCCAGCTCACCGACTCTATTGAGATACCAGAGAATGTGCAAGTGATGGGGCAGA ATGTGGATCTGAAGCCAGTTCAAGGCCTGCTCAAATCTTTGCAGGATGCAGCGTCAAGTG TTGCTCGCTCTTTGTCAGGACAACCTCCATTGAAGTTTCCTATCCGAACAGATAGGGCCC AGTCTTGGCTCCTCACAACCTACCTGGATAGTGATTTGCGCATTTCCCGCGGAGACGGCG GTAGTATTTTTGTACTCCTGAAAGACGGCAGTGAACTCTTGGAAGACTTATGAATGAGTG ATTGAGTCTTCCTGGTGAGGAGTTTCTGAGAGTTCTAGATTTGCGACGGGGTCTCCTCAT GGAATTGTATACNAGTAACATTCTTTTGTCGAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49629 |
Definition |
sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana |
Align length |
133 |
Score (bit) |
188.0 |
E-value |
1.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944297|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_J15, 5' (511 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2... 188 1e-47 sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1... 187 3e-47 sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chlorop... 186 5e-47 sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Sol... 184 2e-46 sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chlorop... 184 3e-46 sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2... 182 1e-45 sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Sol... 179 5e-45 sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplas... 176 7e-44 sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated ... 173 4e-43 sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3... 134 2e-31 sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chlorop... 134 2e-31 sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3... 132 1e-30 sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativ... 126 7e-29 sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein ... 40 0.006 sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4... 40 0.008 sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5... 34 0.35 sp|Q92203|KAPS_EMENI Adenylyl-sulfate kinase OS=Emericella nidul... 33 1.0 sp|Q4R615|IPP4_MACFA Type-1 protein phosphatase inhibitor 4 OS=M... 32 1.3 sp|B0T6C1|MDH_CAUSK Malate dehydrogenase OS=Caulobacter sp. (str... 32 1.7 sp|Q6XQH2|L_CPXVB RNA-directed RNA polymerase OS=Cupixi virus (i... 32 2.3 sp|Q19542|DYHC2_CAEEL Cytoplasmic dynein 2 heavy chain 1 OS=Caen... 31 2.9 sp|Q4I5R3|SET1_GIBZE Histone-lysine N-methyltransferase, H3 lysi... 31 3.9 sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sa... 30 5.0 sp|Q9ULT8|HECD1_HUMAN E3 ubiquitin-protein ligase HECTD1 OS=Homo... 30 6.6 sp|Q80TP3|UBR5_MOUSE E3 ubiquitin-protein ligase UBR5 OS=Mus mus... 30 8.6 sp|O14990|IPP4_HUMAN Putative type-1 protein phosphatase inhibit... 30 8.6
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1 Length = 310
Score = 188 bits (478), Expect = 1e-47 Identities = 92/133 (69%), Positives = 108/133 (81%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V+NSV F GPL E+RSPKRVQIKFE+GVIGTPQLTDSIEIPE V+V+GQ Sbjct: 176 VQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQK 235
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +DL P++GLL S+QD ASSVAR++S QPPLKF + D AQSWLLTTYLD D+RISRGDGG Sbjct: 236 IDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGG 295
Query: 363 SIFVLLKDGSELL 401 S+FVL+K+GS LL Sbjct: 296 SVFVLIKEGSPLL 308
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1 Length = 318
Score = 187 bits (474), Expect = 3e-47 Identities = 90/133 (67%), Positives = 108/133 (81%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V+NSV F GP E+RSPKRVQIKFE+GVIGTPQLTDSIEIPE+V+V+GQ Sbjct: 184 VQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQK 243
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +DL P++GLL S+QD ASSVAR++S QPPLKF + +D QSWLLTTYLD DLRISRGDGG Sbjct: 244 IDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGG 303
Query: 363 SIFVLLKDGSELL 401 S++VL+K+GS LL Sbjct: 304 SVYVLIKEGSSLL 316
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1 Length = 319
Score = 186 bits (472), Expect = 5e-47 Identities = 92/133 (69%), Positives = 107/133 (80%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 VENSV F GPL E+RSPKRVQIKFEEGVIGTPQLTDSIEIPE V+ +GQ Sbjct: 185 VENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQK 244
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +DL P++GLL S+QD A+SVAR++S QPPLKF + D AQSWLLTTYLD D+RISRGDGG Sbjct: 245 IDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDIRISRGDGG 304
Query: 363 SIFVLLKDGSELL 401 S+FVL+K+GS LL Sbjct: 305 SVFVLIKEGSPLL 317
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2 Length = 326
Score = 184 bits (467), Expect = 2e-46 Identities = 89/134 (66%), Positives = 107/134 (79%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V+NSV F GPL EVRSPKRVQIKFEEG+IGTPQLTDSI +PENV+ +GQ Sbjct: 192 VQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQK 251
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +DL P +GL+ S+QD ASSVA+S+S QPP+KFPI + AQSWLLTTYLD +LRISRGD G Sbjct: 252 IDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLDDELRISRGDAG 311
Query: 363 SIFVLLKDGSELLE 404 S+FVL+K+GS LL+ Sbjct: 312 SVFVLIKEGSPLLK 325
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1 Length = 327
Score = 184 bits (466), Expect = 3e-46 Identities = 91/133 (68%), Positives = 106/133 (79%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V NSV F PL EVRSPKRVQ+KFE+GVIGTPQLTDSIEIPE V+V+GQ Sbjct: 193 VHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEVLGQK 252
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +DL P++GLL S+QD ASSVAR++S QPPLKF + D AQSWLLTTYLD DLRISRGDGG Sbjct: 253 IDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDLRISRGDGG 312
Query: 363 SIFVLLKDGSELL 401 S+FVL+++GS LL Sbjct: 313 SVFVLIREGSSLL 325
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1 Length = 319
Score = 182 bits (461), Expect = 1e-45 Identities = 87/133 (65%), Positives = 107/133 (80%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V+N + F+GPL EVRSPKRVQIKF+EG+IGTPQLTDSI +PE ++ GQN Sbjct: 186 VQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQN 245
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +DL P++G+ S+++AASSVAR++SGQPPLK PIRTD A+SWLLTTYLD +LRISRGDG Sbjct: 246 IDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLTTYLDDELRISRGDGS 305
Query: 363 SIFVLLKDGSELL 401 SIFVL K+GS LL Sbjct: 306 SIFVLFKEGSTLL 318
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1 Length = 326
Score = 179 bits (455), Expect = 5e-45 Identities = 86/134 (64%), Positives = 105/134 (78%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V+NSV F GPL EVRSPKRVQIKFEEG+IGTPQLTDSI +PENV+ +GQ Sbjct: 192 VQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQK 251
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +D+ P +GL+ S+QD ASSV +S+S QPP+KFPI + AQSWLLTTYLD +LRI RGD G Sbjct: 252 IDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLDDELRIPRGDAG 311
Query: 363 SIFVLLKDGSELLE 404 S+FVL+K+GS LL+ Sbjct: 312 SVFVLIKEGSPLLK 325
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1 Length = 323
Score = 176 bits (445), Expect = 7e-44 Identities = 85/133 (63%), Positives = 102/133 (76%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V+NS+ F GPL EVRSPKRVQIKFEEGVIGTPQ+TDS+ +PENV+ +GQ Sbjct: 189 VQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQK 248
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +DL P +G+L S+QD ASSVA+++S QPPLKF I AQSWLLTTYLD DLRISR D G Sbjct: 249 IDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAG 308
Query: 363 SIFVLLKDGSELL 401 S+FV +K+GS LL Sbjct: 309 SVFVFIKEGSPLL 321
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1 Length = 322
Score = 173 bits (439), Expect = 4e-43 Identities = 85/133 (63%), Positives = 100/133 (75%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 V+NSV F+GPL EVRSP RV IKFEEGVIGTPQLTDSI IP+NV +GQ Sbjct: 188 VQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQK 247
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 +D P G++ SLQD AS+VA+++S QPP+KF I R +SWLLTTYLD DLRISRGDGG Sbjct: 248 IDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDLRISRGDGG 307
Query: 363 SIFVLLKDGSELL 401 S+FVLLK+GS L Sbjct: 308 SVFVLLKEGSSFL 320
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1 Length = 376
Score = 134 bits (338), Expect = 2e-31 Identities = 65/134 (48%), Positives = 90/134 (67%) Frame = +3
Query: 3 VENSVTFTGPLXXXXXXXXXXXEVRSPKRVQIKFEEGVIGTPQLTDSIEIPENVQVMGQN 182 ++NS T + P EVRSP R+++ F+EG + P + S+++PE+V V GQ Sbjct: 243 IDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPESVGVFGQQ 302
Query: 183 VDLKPVQGLLKSLQDAASSVARSLSGQPPLKFPIRTDRAQSWLLTTYLDSDLRISRGDGG 362 + L ++ L LQD A++++R+LSGQPPLK P +R SWLLTTYLD DLRISRGDGG Sbjct: 303 ISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLRISRGDGG 362
Query: 363 SIFVLLKDGSELLE 404 +FVL ++GS LLE Sbjct: 363 -LFVLAREGSSLLE 375
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O24141 |
Definition |
tr|O24141|O24141_TOBAC Plastid-lipid-Associated Protein (Fragment) OS=Nicotiana tabacum |
Align length |
134 |
Score (bit) |
187.0 |
E-value |
3.0e-46 |
Report |
|