DK944298
Clone id YMU02A01NGRL0005_J16
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_J16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGTATCGTAGCGGGTATAGTT
TAGTAGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAGTTGAGGGATCGTATCTCGG
CTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAATATGTGTTTTCTTATTATTT
CTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATTCATTTCAAGAACTAGGGAA
GATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATACTTGGTTTAATTTCTACTT
CCGGGGAGATAAATAAAGAAAAAAATCTATGGGTAGACGTCTAAGATAGCTGACTCATCG
TCACTAAACCTCAGAGAATAAATCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944298|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_J16, 5'
(347 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6D2J9
Definition tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length 50
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944298|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_J16, 5'
(347 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 1.9

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
Length = 319

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -3

Query: 189 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 40
LK +++E+D ST + ++++F A +F+L VNL + R++ Q C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283