DK944305 |
Clone id |
YMU02A01NGRL0005_K01 |
Library |
YMU02 |
Length |
595 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_K01. 5' end sequence. |
Accession |
DK944305 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GATGTTGCTAGGAAGGCCCTTATTCTAGCCCGCTTCTTAGGATGGTCTATCAATATGGAA GATGTAATGGTAGAGAGCCTATTTCCAACACATATGGATCAGAGCAAAATGTCTACAGAG GAGTTTCTCAAAGAAGGTCTATTGTTGCTTAATGCGGGAATAAATGATCGCATAAATTCT GCAAAAACTGGAGGAAAGGTGCTACGCTATGTTGCAACAGTTGCTAATGGCAGATGTAAT GTTGGAATGGTTGAAGTTTCACAAGACTCTCCTTTAGGACAACTCAAAGGAAGTGACAAT CTGATTGAGGTTTACAGTAGATGCTACAAGGAATCCCCATTTGTTATGCAAGGAGCTGGA GCTGGAAATGACACCACGGCTTGTGGAGTCTTAGCAGATATTTTGGATCTGCAGGATCTG TTTTGAAAAGAGTGATAAGACTTGCTTCATTATACCAATTTTCACAGCATTTACCTTGGA GATGCCTTAAGAGTTGAATTTCCACAGCATATACCTTGGAGATGCCTTAGAGTTGAATTT TCACATCTTTTACCTTGGAGATGCCTTAGAGCTGAATTTTCACAGTATTAACCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8K9U9 |
Definition |
sp|Q8K9U9|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum |
Align length |
136 |
Score (bit) |
105.0 |
E-value |
2.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944305|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_K01, 5' (581 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8K9U9|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydr... 105 2e-22 sp|P44505|AKH_HAEIN Bifunctional aspartokinase/homoserine dehydr... 102 1e-21 sp|P27725|AK1H_SERMA Bifunctional aspartokinase/homoserine dehyd... 99 2e-20 sp|P00562|AK2H_ECOLI Bifunctional aspartokinase/homoserine dehyd... 95 2e-19 sp|Q89AR4|AKH_BUCBP Bifunctional aspartokinase/homoserine dehydr... 92 2e-18 sp|P00561|AK1H_ECOLI Bifunctional aspartokinase/homoserine dehyd... 89 2e-17 sp|Q5B998|DHOM_EMENI Homoserine dehydrogenase OS=Emericella nidu... 88 4e-17 sp|P57290|AKH_BUCAI Bifunctional aspartokinase/homoserine dehydr... 88 4e-17 sp|Q9SA18|AKH1_ARATH Bifunctional aspartokinase/homoserine dehyd... 86 1e-16 sp|P49079|AKH1_MAIZE Bifunctional aspartokinase/homoserine dehyd... 83 1e-15 sp|P49080|AKH2_MAIZE Bifunctional aspartokinase/homoserine dehyd... 82 1e-15 sp|O81852|AKH2_ARATH Bifunctional aspartokinase/homoserine dehyd... 82 3e-15 sp|P37142|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydr... 81 4e-15 sp|P31116|DHOM_YEAST Homoserine dehydrogenase OS=Saccharomyces c... 73 9e-13 sp|O94671|DHOM_SCHPO Probable homoserine dehydrogenase OS=Schizo... 70 8e-12 sp|A0Q814|Y1514_FRATN UPF0341 protein FTN_1514 OS=Francisella tu... 32 1.8 sp|Q9ZL20|DHOM_HELPJ Homoserine dehydrogenase OS=Helicobacter py... 32 2.3 sp|A4IXK7|Y787_FRATW UPF0341 protein FTW_0787 OS=Francisella tul... 32 3.0 sp|A7N9Y1|Y307_FRATF UPF0341 protein FTA_0307 OS=Francisella tul... 32 3.0 sp|Q2A5B9|Y289_FRATH UPF0341 protein FTL_0289 OS=Francisella tul... 32 3.0 sp|Q0BNN3|Y288_FRATO UPF0341 protein FTH_0288 OS=Francisella tul... 32 3.0 sp|Q5NEV4|Y1504_FRATT UPF0341 protein FTT1504 OS=Francisella tul... 32 3.0 sp|Q14GA7|Y1504_FRAT1 UPF0341 protein FTF1504 OS=Francisella tul... 32 3.0 sp|Q8E168|FOLD_STRA5 Bifunctional protein folD OS=Streptococcus ... 31 3.9 sp|Q8E6M3|FOLD_STRA3 Bifunctional protein folD OS=Streptococcus ... 31 3.9 sp|Q3K2M6|FOLD_STRA1 Bifunctional protein folD OS=Streptococcus ... 31 3.9 sp|Q69ZL1|FGD6_MOUSE FYVE, RhoGEF and PH domain-containing prote... 31 3.9 sp|Q9CGD8|DHOM_LACLA Homoserine dehydrogenase OS=Lactococcus lac... 31 3.9 sp|P52985|DHOM_LACLC Homoserine dehydrogenase OS=Lactococcus lac... 31 5.1 sp|P26600|PAL5_SOLLC Phenylalanine ammonia-lyase OS=Solanum lyco... 30 8.7
>sp|Q8K9U9|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=thrA PE=3 SV=1 Length = 814
Score = 105 bits (261), Expect = 2e-22 Identities = 54/136 (39%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK L+LAR +G+SI ++D+ +E + P + + S EEFL + L L++ ++R+N Sbjct: 677 DVARKLLVLAREIGYSIELKDISIEPILPERFKKYQNS-EEFLFK-LKELDSFFSERVNK 734
Query: 181 AKTGGKVLRYVATVA-NGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQGA 357 A+ G VLR++ ++ NG+C+V + E++ ++PL ++K +N + Y+ Y+ P V++G Sbjct: 735 ARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIPLVLRGY 794
Query: 358 GAGNDTTACGVLADIL 405 GAGND TA GV +D+L Sbjct: 795 GAGNDVTASGVFSDLL 810
>sp|P44505|AKH_HAEIN Bifunctional aspartokinase/homoserine dehydrogenase OS=Haemophilus influenzae GN=thrA PE=3 SV=1 Length = 815
Score = 102 bits (255), Expect = 1e-21 Identities = 57/135 (42%), Positives = 81/135 (60%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK LILAR G + + DV VE + P K S +EF+ L L+ R+ + Sbjct: 678 DVARKLLILAREAGIELELSDVEVEGVLPKGFSDGK-SADEFMAM-LPQLDEEFKTRVAT 735
Query: 181 AKTGGKVLRYVATVANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQGAG 360 AK GKVLRYV ++ G+C V +V V ++PL ++K +N + Y+R Y+ P +++G G Sbjct: 736 AKAEGKVLRYVGKISEGKCKVSIVAVDLNNPLYKVKDGENALAFYTRYYQPIPLLLRGYG 795
Query: 361 AGNDTTACGVLADIL 405 AGN TA G+ ADIL Sbjct: 796 AGNAVTAAGIFADIL 810
>sp|P27725|AK1H_SERMA Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Serratia marcescens GN=thrA PE=3 SV=1 Length = 819
Score = 98.6 bits (244), Expect = 2e-20 Identities = 57/135 (42%), Positives = 77/135 (57%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK LILAR G+ + + D+ VE + P D S + FL L L+ + + Sbjct: 678 DVARKLLILAREAGYKLELSDIEVEPVLPPSFDASG-DVDTFLAR-LPELDKEFARNVAN 735
Query: 181 AKTGGKVLRYVATVANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQGAG 360 A GKVLRYV + GRC V + V + PL ++K +N + YSR Y+ P V++G G Sbjct: 736 AAEQGKVLRYVGLIDEGRCKVRIEAVDGNDPLYKVKNGENALAFYSRYYQPLPLVLRGYG 795
Query: 361 AGNDTTACGVLADIL 405 AGND TA GV AD+L Sbjct: 796 AGNDVTAAGVFADLL 810
>sp|P00562|AK2H_ECOLI Bifunctional aspartokinase/homoserine dehydrogenase 2 OS=Escherichia coli (strain K12) GN=metL PE=1 SV=3 Length = 810
Score = 95.1 bits (235), Expect = 2e-19 Identities = 59/141 (41%), Positives = 82/141 (58%), Gaps = 1/141 (0%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DV RK +ILAR G++I + V VESL P H + S + F + G L N + R+ + Sbjct: 672 DVMRKLVILAREAGYNIEPDQVRVESLVPAHCEGG--SIDHFFENGDEL-NEQMVQRLEA 728
Query: 181 AKTGGKVLRYVATV-ANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQGA 357 A+ G VLRYVA ANG+ VG+ V +D PL L DN+ + SR Y+++P V++G Sbjct: 729 AREMGLVLRYVARFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGP 788
Query: 358 GAGNDTTACGVLADILDLQDL 420 GAG D TA + +DI L L Sbjct: 789 GAGRDVTAGAIQSDINRLAQL 809
>sp|Q89AR4|AKH_BUCBP Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=thrA PE=3 SV=1 Length = 816
Score = 92.0 bits (227), Expect = 2e-18 Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK LILAR +G+ + ++D+ +E L P + +T+ K L L+ +R+ Sbjct: 679 DVARKLLILAREVGYKLELKDIKIEPLLPKEFNNISNTTDFITK--LKELDQIFCNRVKK 736
Query: 181 AKTGGKVLRYVATV-ANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQGA 357 A+ GK LR+V + G C V + EV + PL +K +N + YS+ Y+ P V++G Sbjct: 737 ARKLGKRLRFVGIINQKGNCQVKIDEVDHNDPLYNIKNGENALAFYSKYYQPIPLVLRGY 796
Query: 358 GAGNDTTACGVLADIL 405 GAGN+ TA G+ +D+L Sbjct: 797 GAGNNVTASGIFSDVL 812
>sp|P00561|AK1H_ECOLI Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Escherichia coli (strain K12) GN=thrA PE=1 SV=2 Length = 820
Score = 89.0 bits (219), Expect = 2e-17 Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 1/136 (0%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK LILAR G + + D+ +E + P + ++ F+ L L+ R+ Sbjct: 678 DVARKLLILARETGRELELADIEIEPVLPAEFN-AEGDVAAFMAN-LSQLDDLFAARVAK 735
Query: 181 AKTGGKVLRYVATV-ANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQGA 357 A+ GKVLRYV + +G C V + EV + PL ++K +N + YS Y+ P V++G Sbjct: 736 ARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGY 795
Query: 358 GAGNDTTACGVLADIL 405 GAGND TA GV AD+L Sbjct: 796 GAGNDVTAAGVFADLL 811
>sp|Q5B998|DHOM_EMENI Homoserine dehydrogenase OS=Emericella nidulans GN=AN2882 PE=1 SV=1 Length = 368
Score = 87.8 bits (216), Expect = 4e-17 Identities = 56/141 (39%), Positives = 78/141 (55%), Gaps = 6/141 (4%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVM-VESLFPTHMDQSKMSTE---EFLKEGLLLLNAGIND 168 DVARK ILAR G + D +ESL P + S + +F+ L ++ + Sbjct: 223 DVARKLTILARIAGLDVQSPDSFPIESLIPAELTSLPSSADGIAQFMAR-LPEFDSQMAA 281
Query: 169 RINSAKTGGKVLRYVATV--ANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPF 342 A+ GKV+RYV +V A VG+ + +DS + LKGSDN+I Y+R Y +P Sbjct: 282 IKEGAEKAGKVVRYVGSVDVAKKEVRVGLQQFDKDSAIAGLKGSDNIISFYTRRYGSNPL 341
Query: 343 VMQGAGAGNDTTACGVLADIL 405 ++QGAGAG D TA GV AD+L Sbjct: 342 IVQGAGAGGDVTAMGVTADLL 362
>sp|P57290|AKH_BUCAI Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=thrA PE=3 SV=1 Length = 816
Score = 87.8 bits (216), Expect = 4e-17 Identities = 52/136 (38%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK LILAR G++I ++D+ +E L P + + T++FL + L L+ +++I Sbjct: 679 DVARKLLILARESGYNIELKDIKIEPLLPNNFKIYE-DTDKFLLK-LKELDVYFSNKIKQ 736
Query: 181 AKTGGKVLRYVATVANGR-CNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQGA 357 A G VLR+VAT+ R + + EV+ ++PL ++K +N + Y+ Y+ P V++G Sbjct: 737 ALNVGNVLRFVATIEQKRQFFIKLEEVNINNPLYKVKNGENALAFYTNYYQPIPLVLRGY 796
Query: 358 GAGNDTTACGVLADIL 405 GAGN+ TA GV +D+L Sbjct: 797 GAGNNVTASGVFSDLL 812
>sp|Q9SA18|AKH1_ARATH Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1 Length = 911
Score = 85.9 bits (211), Expect = 1e-16 Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 2/139 (1%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK ILAR G +++E + V++L P + Q+ S EEF+ E L + ++ + Sbjct: 767 DVARKVTILARESGLKLDLEGLPVQNLVPKPL-QACASAEEFM-EKLPQFDEELSKQREE 824
Query: 181 AKTGGKVLRYVATV--ANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQG 354 A+ G+VLRYV V + V + +D P QL G+DN+I ++ YKE P +++G Sbjct: 825 AEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQPLIVRG 884
Query: 355 AGAGNDTTACGVLADILDL 411 GAG TA G+ +DIL L Sbjct: 885 PGAGAQVTAGGIFSDILRL 903
>sp|P49079|AKH1_MAIZE Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1 Length = 920
Score = 82.8 bits (203), Expect = 1e-15 Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Frame = +1
Query: 1 DVARKALILARFLGWSINMEDVMVESLFPTHMDQSKMSTEEFLKEGLLLLNAGINDRINS 180 DVARK +ILAR G + + D+ V SL P + +S S +E++++ +R N Sbjct: 776 DVARKVIILARESGLGLELSDIPVRSLVPEAL-KSCTSADEYMQKLPSFDEDWARERKN- 833
Query: 181 AKTGGKVLRYVATV--ANGRCNVGMVEVSQDSPLGQLKGSDNLIEVYSRCYKESPFVMQG 354 A+ G+VLRYV V + + V + +D P QL GSDN+I + YK+ P +++G Sbjct: 834 AEAAGEVLRYVGVVDVVSKKGQVELRAYKRDHPFAQLSGSDNIIAFTTSRYKDQPLIVRG 893
Query: 355 AGAGNDTTACGVLADILDL 411 GAG + TA GV DIL L Sbjct: 894 PGAGAEVTAGGVFCDILRL 912
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q3S3F6 |
Definition |
tr|Q3S3F6|Q3S3F6_SOYBN Homoserine dehydrogenase OS=Glycine max |
Align length |
141 |
Score (bit) |
176.0 |
E-value |
8.0e-43 |
Report |
|