DK944308
Clone id YMU02A01NGRL0005_K04
Library
Length 295
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_K04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGGGCGGCGGCTACGGCAAGGGTCCGGGCCACCCTCACTAACTCAAGGCAGCTGCTTC
GTCCGAGCGCGTCTTCTGTCCGATTCTTGGGTTTATCCACCCCAGACGCGCGTTCCTTGT
GAAATAAATAATACGGTGTCAGCACTGAAGTGTTAAAATTGTCTTTGTTGTTGCAACCTG
TGTACCTTATGGGAATTCATTTGCTGGTTTAACTTTTGTCTATCTTGCCATTTTGTAGAG
GGAAATGATCCGTCTTGAGGTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q54F40
Definition sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase DDB_G0291133 OS=Dictyostelium discoideum
Align length 21
Score (bit) 29.6
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944308|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_K04, 5'
(265 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase D... 30 5.0
sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831 ... 29 6.5
sp|Q9BYH8|IKBZ_HUMAN NF-kappa-B inhibitor zeta OS=Homo sapiens G... 29 8.5

>sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase
DDB_G0291133 OS=Dictyostelium discoideum GN=DDB_G0291133
PE=3 SV=1
Length = 778

Score = 29.6 bits (65), Expect = 5.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1

Query: 172 NNKDNFNTSVLTPYYLFHKER 110
NN +N+N ++TPY+ + KER
Sbjct: 510 NNINNYNLKLITPYFQYQKER 530


>sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831
OS=Homo sapiens PE=5 SV=1
Length = 121

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1

Query: 154 NTSVLTPYYLFHKERASGVDKPK 86
N S L PYYLFH+ R GVD K
Sbjct: 69 NASKLMPYYLFHRSR--GVDNSK 89


>sp|Q9BYH8|IKBZ_HUMAN NF-kappa-B inhibitor zeta OS=Homo sapiens
GN=NFKBIZ PE=1 SV=1
Length = 718

Score = 28.9 bits (63), Expect = 8.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1

Query: 28 GPPSLTQGSCFVRARLLSDSWVYPPQTRVPCE 123
GP SL+ G R LL ++ PPQT P E
Sbjct: 167 GPDSLSDGPACKRPALLHSQFLTPPQTPTPGE 198


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944308|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_K04, 5'
(265 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******