DK944309 |
Clone id |
YMU02A01NGRL0005_K05 |
Library |
YMU02 |
Length |
558 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_K05. 5' end sequence. |
Accession |
DK944309 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
TAGAGGGCTTTGATGATGCGTCGACGTTTGCTTCCAACAGCGGTGAGGATGGGCCAGTTC TGCAATCTAGTCATAATGCTCTTATGGTGGGTATAATGCAGAATAATAACACTGTTCATT GTGACGAAAACCTTCCTTCATGGGAAAATAGACCAGGTGTGGAGGTTGGGCAGAAGGGAA AGAAGCCATTTAGCTGTAATGATGTTTCAGATGATTGTTTGCAAGAAAATGGGTTGTCAT TATTTGGGAGTGGCCTTGTGGACAAGATGCAGGTGGATAATCCACATCAGAATGCTGTGC ATAGCCTGGACACGGTTGTGGCTATGCAGCAAAATTCTCAGACGCTGCCTCTCAATTTTA CCATGAATCCCGCCCAGCTGCAAGGAAGAGCATTTGCTAGTACAGTAAGGCATAAAACTG TACAGCCAGAGCTTGTGGAAACACGACAACATGAGCAGCCTGCAGCTACTTTAAGAGCAT TGAGCGGTGGGGATCATCTGGAGGTCAATGCAATCATGAGTACTGATGCACCAAGGGTGA GCTTTGGAGAGAACATGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q66J97 |
Definition |
sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis |
Align length |
41 |
Score (bit) |
33.5 |
E-value |
0.73 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZC62 |
Definition |
tr|Q6ZC62|Q6ZC62_ORYSJ Os08g0110000 protein OS=Oryza sativa subsp. japonica |
Align length |
129 |
Score (bit) |
38.5 |
E-value |
0.25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944309|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_K05, 5' (558 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZC62|Q6ZC62_ORYSJ Os08g0110000 protein OS=Oryza sativa subs... 39 0.25 tr|A3BNY4|A3BNY4_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.25 tr|A2YQI8|A2YQI8_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.25 tr|A1ZVU5|A1ZVU5_9SPHI PKD domain protein OS=Microscilla marina ... 34 4.6 tr|Q7Q4S4|Q7Q4S4_ANOGA AGAP000893-PA OS=Anopheles gambiae GN=AGA... 34 4.6 tr|Q4DT36|Q4DT36_TRYCR Mucin-associated surface protein (MASP), ... 34 4.6 tr|B8C761|B8C761_THAPS Predicted protein OS=Thalassiosira pseudo... 34 4.7 tr|Q8G4M0|Q8G4M0_BIFLO Putative uncharacterized protein OS=Bifid... 34 6.1 tr|B3DQS5|B3DQS5_BIFLD Galactose mutarotase OS=Bifidobacterium l... 34 6.1 tr|B7GQB6|B7GQB6_BIFLO Aldose 1-epimerase OS=Bifidobacterium lon... 34 6.1 tr|B2IWH7|B2IWH7_NOSP7 Cobalamin biosynthesis protein CobD OS=No... 34 6.2 tr|Q4HG09|Q4HG09_CAMCO Probable transmembrane protein Cj0352 OS=... 33 7.9 tr|B4PRL3|B4PRL3_DROYA GE24334 OS=Drosophila yakuba GN=GE24334 P... 33 7.9
>tr|Q6ZC62|Q6ZC62_ORYSJ Os08g0110000 protein OS=Oryza sativa subsp. japonica GN=P0007D08.23 PE=2 SV=1 Length = 398
Score = 38.5 bits (88), Expect = 0.25 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 16/129 (12%) Frame = +3
Query: 159 VEVGQKGKKPFSCNDVSDDC-LQENGLSLFGSG--------LVDKMQVDNPHQNAVHSLD 311 V+ GQ+ FS S D LQE+ L ++G+G + DK Q+ + N S D Sbjct: 219 VKDGQRPFDVFSEELASADVFLQESQLLIYGNGKDKPPTGLMFDKQQIKGLYFNTSPSKD 278
Query: 312 TVVAMQQNSQTLPLNFTMNPAQLQG-------RAFASTVRHKTVQPELVETRQHEQPAAT 470 TV+A + + +PL M L R F T+ + + P++ E E P Sbjct: 279 TVLAAV-SMRPIPLAPIMEKLSLTPENYGTVPRYFIQTLDDRMLSPDVQEKLVRENPPDG 337
Query: 471 LRALSGGDH 497 + + GGDH Sbjct: 338 IFKIKGGDH 346
>tr|A3BNY4|A3BNY4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024756 PE=4 SV=1 Length = 387
Score = 38.5 bits (88), Expect = 0.25 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 16/129 (12%) Frame = +3
Query: 159 VEVGQKGKKPFSCNDVSDDC-LQENGLSLFGSG--------LVDKMQVDNPHQNAVHSLD 311 V+ GQ+ FS S D LQE+ L ++G+G + DK Q+ + N S D Sbjct: 219 VKDGQRPFDVFSEELASADVFLQESQLLIYGNGKDKPPTGLMFDKQQIKGLYFNTSPSKD 278
Query: 312 TVVAMQQNSQTLPLNFTMNPAQLQG-------RAFASTVRHKTVQPELVETRQHEQPAAT 470 TV+A + + +PL M L R F T+ + + P++ E E P Sbjct: 279 TVLAAV-SMRPIPLAPIMEKLSLTPENYGTVPRYFIQTLDDRMLSPDVQEKLVRENPPDG 337
Query: 471 LRALSGGDH 497 + + GGDH Sbjct: 338 IFKIKGGDH 346
>tr|A2YQI8|A2YQI8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27553 PE=4 SV=1 Length = 399
Score = 38.5 bits (88), Expect = 0.25 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 16/129 (12%) Frame = +3
Query: 159 VEVGQKGKKPFSCNDVSDDC-LQENGLSLFGSG--------LVDKMQVDNPHQNAVHSLD 311 V+ GQ+ FS S D LQE+ L ++G+G + DK Q+ + N S D Sbjct: 220 VKDGQRPFDVFSEELASADVFLQESQLLIYGNGKDKPPTGLMFDKQQIKGLYFNTSPSKD 279
Query: 312 TVVAMQQNSQTLPLNFTMNPAQLQG-------RAFASTVRHKTVQPELVETRQHEQPAAT 470 TV+A + + +PL M L R F T+ + + P++ E E P Sbjct: 280 TVLAAV-SMRPIPLAPIMEKLSLTPENYGTVPRYFIQTLDDRMLSPDVQEKLVRENPPDG 338
Query: 471 LRALSGGDH 497 + + GGDH Sbjct: 339 IFKIKGGDH 347
>tr|A1ZVU5|A1ZVU5_9SPHI PKD domain protein OS=Microscilla marina ATCC 23134 GN=M23134_06221 PE=4 SV=1 Length = 1206
Score = 34.3 bits (77), Expect = 4.6 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = -3
Query: 268 ILSTRPLPNNDNPFSCKQSSETSLQLNG-FFPFCPTSTPGLFSHEGR 131 I T PLPN NP C+ SS + NG F F PGL H GR Sbjct: 867 IAKTAPLPNLGNPTVCQGSSISLTPSNGTTFEFYAAPPPGLPLHTGR 913
>tr|Q7Q4S4|Q7Q4S4_ANOGA AGAP000893-PA OS=Anopheles gambiae GN=AGAP000893 PE=4 SV=4 Length = 2727
Score = 34.3 bits (77), Expect = 4.6 Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 1/178 (0%) Frame = +3
Query: 12 DDASTFASNSGEDGPVLQSSHNALMVGIMQNNNTVHCDENLPSWENRPGVEVGQKGKKPF 191 DD T +S+ ED PV L TV DE+ V Q+ KP Sbjct: 1162 DDEVTTSSSVAEDTPVSVEQDEKLEQPAPTTVRTVEADED---------TAVAQEQDKPQ 1212
Query: 192 SCNDVSDDCLQENGLSLFGSGLVDKMQ-VDNPHQNAVHSLDTVVAMQQNSQTLPLNFTMN 368 S +D ++D + + ++ Q + P Q A + T A +Q F Sbjct: 1213 SSDDQAEDDDEPSSTTVRADKPSSVEQDEEGPAQEATTARVTETATEQEESVT--EFETK 1270
Query: 369 PAQLQGRAFASTVRHKTVQPELVETRQHEQPAATLRALSGGDHLEVNAIMSTDAPRVS 542 +Q +TV + Q +L +T QPAA+ A E + TD P ++ Sbjct: 1271 RKTIQTTVAPTTVSEQ--QDDLEKTETTTQPAASAAAADELQEEEHQEVKLTDEPELN 1326
>tr|Q4DT36|Q4DT36_TRYCR Mucin-associated surface protein (MASP), putative OS=Trypanosoma cruzi GN=Tc00.1047053506139.40 PE=4 SV=1 Length = 376
Score = 34.3 bits (77), Expect = 4.6 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 7/149 (4%) Frame = +3
Query: 30 ASNSGEDGPV--LQSSHNALMVGIMQNNNTVHCDENLPSWENRPGVEVGQKGKKPFSCND 203 A ++G P L+++ A G+ Q+ +T + NLP+ N+ E G+K Sbjct: 148 APSTGSKSPSGSLETTLQATQTGLQQSADTPN---NLPTGNNKINKETGRK--------T 196
Query: 204 VSDDCLQENGLSLFGSGLVDKMQVD-----NPHQNAVHSLDTVVAMQQNSQTLPLNFTMN 368 SD +E S G+VD +Q D HQN H T +Q + Q L+ T+N Sbjct: 197 ASDKTAEETSPSSLREGVVD-IQKDAEGNNEKHQNNPHLPATAATLQVHQQDGKLD-TIN 254
Query: 369 PAQLQGRAFASTVRHKTVQPELVETRQHE 455 L G ++ + V+ Q + Sbjct: 255 ETILSGETNNENIQQNDSSSKSVKAVQSD 283
>tr|B8C761|B8C761_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_23803 PE=4 SV=1 Length = 382
Score = 34.3 bits (77), Expect = 4.7 Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 4/66 (6%) Frame = -1
Query: 315 PCPGYAQHSDVDYPPASCPQGHSQIMTTHFLAN----NHLKHHYS*MASFPSAQPPHLVY 148 P PGY H YPP P GH A HY A +P PPH Y Sbjct: 240 PYPGYGGHPG--YPPYGSPLGHDPYAEYDPYAGYPPYGGPPPHYDPYAGYPPPYPPHGGY 297
Query: 147 FPMKEG 130 +P G Sbjct: 298 YPPPPG 303
>tr|Q8G4M0|Q8G4M0_BIFLO Putative uncharacterized protein OS=Bifidobacterium longum GN=BL1359 PE=4 SV=1 Length = 314
Score = 33.9 bits (76), Expect = 6.1 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +3
Query: 6 GFDDASTFASNSGEDGPVLQSSHNALMVGIMQNNNTVHCDENLPSWENRPGVEVGQKGKK 185 GFDDA T +N GEDG S +A+ T+ D+ + SW+ G E+G+K ++ Sbjct: 219 GFDDAWTDITNRGEDG-----STSAVFTRPDGIKVTLTGDKTINSWQVCTGNEIGEKARQ 273
>tr|B3DQS5|B3DQS5_BIFLD Galactose mutarotase OS=Bifidobacterium longum (strain DJO10A) GN=galM1 PE=4 SV=1 Length = 314
Score = 33.9 bits (76), Expect = 6.1 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +3
Query: 6 GFDDASTFASNSGEDGPVLQSSHNALMVGIMQNNNTVHCDENLPSWENRPGVEVGQKGKK 185 GFDDA T +N GEDG S +A+ T+ D+ + SW+ G E+G+K ++ Sbjct: 219 GFDDAWTDITNRGEDG-----STSAVFTRPDGIKVTLTGDKTINSWQVCTGNEIGEKARQ 273
>tr|B7GQB6|B7GQB6_BIFLO Aldose 1-epimerase OS=Bifidobacterium longum subsp. infantis ATCC 15697 GN=Blon_0896 PE=4 SV=1 Length = 314
Score = 33.9 bits (76), Expect = 6.1 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +3
Query: 6 GFDDASTFASNSGEDGPVLQSSHNALMVGIMQNNNTVHCDENLPSWENRPGVEVGQKGKK 185 GFDDA T +N GEDG S +A+ T+ D+ + SW+ G E+G+K ++ Sbjct: 219 GFDDAWTDITNRGEDG-----STSAVFTRPDGIKVTLTGDKTINSWQVCTGNEIGEKARQ 273
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