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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944312
Clone id YMU02A01NGRL0005_K09
Library
Length 317
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_K09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TGTTGCTAAAACCAACCTTGAAACTGGGGAGATTGGTGGTGTCTTTGAAAGTGTTCAGCC
TTCTGATACTGACCTTGGCTCTAAAGCCCCCAAAGATGTCAAGATTCAGGGTATTTGGTA
TGCGCAAGTAGAGTAGACGGAGAAAACTTGGGGTCTTTCCTTTCGCAAGGCCCTGGCTTG
ACCCTGTCCTTGTTTCTATATTGTTATGTAAAGCAAAGTTCTGAAAAAAGGTGCCTGTTC
ATTAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O49079
Definition sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis
Align length 44
Score (bit) 77.8
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944312|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_K09, 5'
         (243 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop...    78   2e-14
sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop...    76   5e-14
sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla...    76   5e-14
sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop...    75   8e-14
sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop...    74   3e-13
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop...    74   3e-13
sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo...    73   5e-13
sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo...    72   7e-13
sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop...    72   1e-12
sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop...    70   3e-12
sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop...    70   4e-12
sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop...    67   2e-11
sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype...    62   1e-09
sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype...    60   4e-09
sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype...    59   8e-09
sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype...    54   2e-07
sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype...    54   2e-07
sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype...    51   2e-06
sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop...    46   5e-05
sp|Q9XD84|TIBA_ECOLX Adhesin/invasin tibA OS=Escherichia coli GN...    30   3.8  

>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1
          Length = 329

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+  ETGE+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+E
Sbjct: 286 VTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329


>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1
          Length = 333

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 34/44 (77%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+N +TGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 289 VTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332


>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1
          Length = 329

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 34/44 (77%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V +T  ETGE+ GVFES+QPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 285 VTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328


>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2
          Length = 338

 Score = 75.5 bits (184), Expect = 8e-14
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 130
           VAK N ETGEI GVFES+QPSDTDLG+K PKD+K  G+WYAQ+
Sbjct: 292 VAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334


>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1
          Length = 332

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V ++  ETGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 289 VTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332


>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2
          Length = 329

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V ++  ETGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 286 VTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329


>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2,
           chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1
          Length = 331

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           + K+  ETGE+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+E
Sbjct: 288 ITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331


>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1,
           chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2
          Length = 332

 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+  ETGE+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+E
Sbjct: 289 VTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332


>sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1
          Length = 293

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 130
           VAK N  TGEI GVFES+QPSDTDLG+K PKD+KI G+WY Q+
Sbjct: 249 VAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291


>sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2
           SV=1
          Length = 291

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 30/44 (68%), Positives = 38/44 (86%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           VAK +  TGEI GVFES+QPSDTDLG+K PKD+K+ G+WYAQ++
Sbjct: 248 VAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291
tr_hit_id A9CMA1
Definition tr|A9CMA1|A9CMA1_9VIRI 33kDa oxygen evolving protein of photosystem II OS=Closterium peracerosum-strigosum-littorale complex
Align length 44
Score (bit) 79.7
E-value 7.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944312|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_K09, 5'
         (243 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9CMA1|A9CMA1_9VIRI 33kDa oxygen evolving protein of photosys...    80   7e-14
tr|B6T3B2|B6T3B2_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea...    79   1e-13
tr|B4FRF2|B4FRF2_MAIZE Putative uncharacterized protein OS=Zea m...    79   1e-13
tr|B4F9R9|B4F9R9_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea...    78   2e-13
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella paten...    78   2e-13
tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea...    77   4e-13
tr|A9NRV4|A9NRV4_PICSI Putative uncharacterized protein OS=Picea...    77   4e-13
tr|Q943W1|Q943W1_ORYSJ cDNA clone:001-013-B04, full insert seque...    75   2e-12
tr|B8A8L8|B8A8L8_ORYSI Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|A6N1L3|A6N1L3_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    75   2e-12
tr|A6N1E2|A6N1E2_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    75   2e-12
tr|A6N109|A6N109_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    75   2e-12
tr|B7FHI9|B7FHI9_MEDTR Putative uncharacterized protein OS=Medic...    75   2e-12
tr|A9TSK0|A9TSK0_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9PK45|A9PK45_POPJC Putative uncharacterized protein OS=Popul...    75   2e-12
tr|A5JV93|A5JV93_9POAL Chloroplast oxygen-evolving enhancer prot...    75   2e-12
tr|A9SA96|A9SA96_PHYPA Predicted protein OS=Physcomitrella paten...    74   3e-12
tr|A9PJ90|A9PJ90_POPJC Putative uncharacterized protein OS=Popul...    74   3e-12
tr|A9PHI5|A9PHI5_POPTR Putative uncharacterized protein OS=Popul...    74   3e-12
tr|A9PGS6|A9PGS6_POPTR Putative uncharacterized protein OS=Popul...    74   3e-12
tr|A9CM92|A9CM92_9EUGL 33kDa oxygen evolving protein of photosys...    74   3e-12
tr|A9PHA9|A9PHA9_POPTR Putative uncharacterized protein OS=Popul...    74   5e-12
tr|A9CM97|A9CM97_9CHLO 33kDa oxygen evolving protein of photosys...    74   5e-12
tr|Q9LRC4|Q9LRC4_9ROSI Oxygen evolving enhancer protein 1 OS=Bru...    73   6e-12
tr|A9CM98|A9CM98_NEPOL 33kDa oxygen evolving protein of photosys...    73   6e-12
tr|A9CM96|A9CM96_9CHLO 33kDa oxygen evolving protein of photosys...    73   6e-12
tr|Q84QE8|Q84QE8_TOBAC Oxygen evolving complex 33 kDa photosyste...    73   8e-12
tr|A9RS28|A9RS28_PHYPA Predicted protein OS=Physcomitrella paten...    73   8e-12
tr|A7NTK5|A7NTK5_VITVI Chromosome chr18 scaffold_1, whole genome...    73   8e-12
tr|A5BPG1|A5BPG1_VITVI Putative uncharacterized protein OS=Vitis...    73   8e-12

>tr|A9CMA1|A9CMA1_9VIRI 33kDa oxygen evolving protein of photosystem
           II OS=Closterium peracerosum-strigosum-littorale complex
           GN=psbO PE=2 SV=1
          Length = 325

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 35/44 (79%), Positives = 42/44 (95%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           VAK+N+ETGEIGGVF SVQPSDTD+G+K PKDVKI+GIWYAQ++
Sbjct: 282 VAKSNVETGEIGGVFTSVQPSDTDMGAKVPKDVKIEGIWYAQLD 325


>tr|B6T3B2|B6T3B2_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 329

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+N ETGE+ GVFESVQPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 286 VTKSNPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 329


>tr|B4FRF2|B4FRF2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 230

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+N ETGE+ GVFESVQPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 187 VTKSNPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 230


>tr|B4F9R9|B4F9R9_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 335

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+N +TGE+ GVFESVQPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 292 VTKSNPDTGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 335


>tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_200318 PE=4 SV=1
          Length = 274

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 35/44 (79%), Positives = 42/44 (95%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           +AK+N+ETGEI G FES+QPSDTDLGSKAPK+VKI+GI+YAQVE
Sbjct: 231 IAKSNVETGEIAGTFESIQPSDTDLGSKAPKEVKIEGIFYAQVE 274


>tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 341

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V+K+  +TGE+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+E
Sbjct: 296 VSKSKPDTGEVIGVFESLQPSDTDLGSKAPKDVKIQGIWYAQIE 339


>tr|A9NRV4|A9NRV4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 341

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V+K+  +TGE+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+E
Sbjct: 296 VSKSKPDTGEVIGVFESLQPSDTDLGSKAPKDVKIQGIWYAQIE 339


>tr|Q943W1|Q943W1_ORYSJ cDNA clone:001-013-B04, full insert sequence
           OS=Oryza sativa subsp. japonica GN=B1080D07.27 PE=1 SV=1
          Length = 333

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+  ETGE+ GVFESVQPSDTDLG+K PKDVKIQG+WYAQ+E
Sbjct: 290 VTKSKPETGEVIGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE 333


>tr|B8A8L8|B8A8L8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02088 PE=4 SV=1
          Length = 333

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+  ETGE+ GVFESVQPSDTDLG+K PKDVKIQG+WYAQ+E
Sbjct: 290 VTKSKPETGEVIGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE 333


>tr|A6N1L3|A6N1L3_ORYSI Oxygen-evolving enhancer protein 1
           (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 178

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   VAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 133
           V K+  ETGE+ GVFESVQPSDTDLG+K PKDVKIQG+WYAQ+E
Sbjct: 135 VTKSKPETGEVIGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE 178