DK944326
Clone id YMU02A01NGRL0005_L04
Library
Length 226
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_L04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ATCGAATAACAAGCAAGGGGTTGATGGTATCAAGTACAACCAAAAGGGATGTAACGCAGC
TCGGTAGCGTGTTTGTTTTGGGTACAAAATGTCGCAGGTTCAAATCCCGTCATCCCTATC
TCCTATACGTGGAACAACTGGCAGGGGTGACAGTTGTTGCCCCACTTACTTGATCTCTAC
CTCCTTTCTCCCTATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9CJR2
Definition sp|Q9CJR2|Y1932_PASMU Uncharacterized protein PM1932 OS=Pasteurella multocida
Align length 25
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944326|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_L04, 5'
(196 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9CJR2|Y1932_PASMU Uncharacterized protein PM1932 OS=Pasteure... 30 3.8

>sp|Q9CJR2|Y1932_PASMU Uncharacterized protein PM1932 OS=Pasteurella
multocida GN=PM1932 PE=4 SV=1
Length = 71

Score = 30.0 bits (66), Expect = 3.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3

Query: 119 IGMTGFEPATFCTQNKHATELRYIP 45
+G GFEP T +Q AT+LRY P
Sbjct: 44 VGEIGFEPTTHWSQTSCATKLRYSP 68


tr_hit_id A4QM24
Definition tr|A4QM24|A4QM24_PINKO ORF66a OS=Pinus koraiensis
Align length 27
Score (bit) 53.5
E-value 5.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944326|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_L04, 5'
(196 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4QM24|A4QM24_PINKO ORF66a OS=Pinus koraiensis PE=4 SV=1 54 5e-06
tr|A7QDC0|A7QDC0_VITVI Chromosome undetermined scaffold_80, whol... 49 2e-04
tr|A3WQ21|A3WQ21_9GAMM Putative uncharacterized protein OS=Idiom... 39 0.17
tr|A7A485|A7A485_BIFAD Putative uncharacterized protein OS=Bifid... 38 0.29
tr|A4CP42|A4CP42_9FLAO Putative uncharacterized protein OS=Robig... 35 1.9
tr|A3IDC8|A3IDC8_9BACI Putative uncharacterized protein OS=Bacil... 34 3.2
tr|Q0FYC5|Q0FYC5_9RHIZ Putative uncharacterized protein OS=Fulvi... 33 5.5
tr|Q5FA95|Q5FA95_NEIG1 Putative uncharacterized protein OS=Neiss... 33 7.1

>tr|A4QM24|A4QM24_PINKO ORF66a OS=Pinus koraiensis PE=4 SV=1
Length = 66

Score = 53.5 bits (127), Expect = 5e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3

Query: 42 KRDVTQLGSVFVLGTKCRRFKSRHPYL 122
+RDV QLGSVFVLGTKCRRFKS HPYL
Sbjct: 3 RRDVAQLGSVFVLGTKCRRFKSCHPYL 29


>tr|A7QDC0|A7QDC0_VITVI Chromosome undetermined scaffold_80, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00035781001 PE=4 SV=1
Length = 55

Score = 48.5 bits (114), Expect = 2e-04
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +3

Query: 42 KRDVTQLGSVFVLGTKCRRFKSRHPYLL 125
+RDV QLGS FVLGTKC FKS HPYLL
Sbjct: 25 ERDVAQLGSAFVLGTKCHGFKSCHPYLL 52


>tr|A3WQ21|A3WQ21_9GAMM Putative uncharacterized protein
OS=Idiomarina baltica OS145 GN=OS145_12211 PE=4 SV=1
Length = 109

Score = 38.5 bits (88), Expect = 0.17
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -3

Query: 119 IGMTGFEPATFCTQNKHATELRYIPF 42
+G TGFEPAT TQ K AT+LRY PF
Sbjct: 2 VGETGFEPATPWTQTKCATKLRYSPF 27


>tr|A7A485|A7A485_BIFAD Putative uncharacterized protein
OS=Bifidobacterium adolescentis L2-32 GN=BIFADO_00637
PE=4 SV=1
Length = 79

Score = 37.7 bits (86), Expect = 0.29
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3

Query: 119 IGMTGFEPATFCTQNKHATELRYIPFG 39
+G+ GFEPA ++ K AT+LRY PFG
Sbjct: 23 VGLAGFEPAASSSRTKRATKLRYSPFG 49


>tr|A4CP42|A4CP42_9FLAO Putative uncharacterized protein
OS=Robiginitalea biformata HTCC2501 GN=RB2501_01246 PE=4
SV=1
Length = 128

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -3

Query: 119 IGMTGFEPATFCTQNKHATELRYIPFG 39
+GMTGFEPAT T ++T L YIP G
Sbjct: 99 VGMTGFEPATTRTPCVYSTRLNYIPNG 125


>tr|A3IDC8|A3IDC8_9BACI Putative uncharacterized protein OS=Bacillus
sp. B14905 GN=BB14905_20880 PE=4 SV=1
Length = 60

Score = 34.3 bits (77), Expect = 3.2
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +1

Query: 73 LFWVQNVAGSNPVIPISYTW 132
L W Q V GSNPVIPI Y W
Sbjct: 5 LVWDQGVVGSNPVIPIIYKW 24


>tr|Q0FYC5|Q0FYC5_9RHIZ Putative uncharacterized protein
OS=Fulvimarina pelagi HTCC2506 GN=FP2506_02475 PE=4 SV=1
Length = 351

Score = 33.5 bits (75), Expect = 5.5
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3

Query: 119 IGMTGFEPATFCTQNKHATELRYIP 45
+G GFEPAT +Q + AT LRY P
Sbjct: 2 VGAAGFEPATLWSQTRCATRLRYAP 26


>tr|Q5FA95|Q5FA95_NEIG1 Putative uncharacterized protein
OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
GN=NGO0133 PE=4 SV=1
Length = 67

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3

Query: 119 IGMTGFEPATFCTQNKHATELRYIP 45
+GM GFEP T ++ K AT LRYIP
Sbjct: 42 VGMRGFEPPTPSSRTKCATGLRYIP 66