DK944340 |
Clone id |
YMU02A01NGRL0005_L24 |
Library |
YMU02 |
Length |
335 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_L24. 5' end sequence. |
Accession |
DK944340 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL184Contig1 |
Sequence |
TTTGCAGTGAAGAGGAAAGCTGTTGGAATCTGGTCCTGCAAGGACTGCAACAAGATCAAG GCCGGTGGTGCCTACACGTTAAATACTGCCAGTGCTGTAACTGTGCGTAGTACCATCAGA CGATTGAGGGAGCAGGTTGAAGGATAGACTGCTGATTTGAGTGCATGTAGTCAGAGTGGA ATTGTAACTGCAGCTGCTGCAAATTTTGCTAATATGAAAACCTCTTGAACGTATTTAGTT GCTATGTGTCTCACAGCAGGGGAATGGATTCTCATTATTGCAGTTCTTGATGGGCTTGGG GATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZRS8 |
Definition |
sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga menziesii |
Align length |
48 |
Score (bit) |
91.3 |
E-value |
1.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NL27 |
Definition |
tr|A9NL27|A9NL27_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
48 |
Score (bit) |
91.7 |
E-value |
2.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944340|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_L24, 5' (305 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NL27|A9NL27_PICSI Putative uncharacterized protein OS=Picea... 92 2e-17 tr|A9PAT8|A9PAT8_POPTR Putative uncharacterized protein OS=Popul... 91 2e-17 tr|A9NT67|A9NT67_PICSI Putative uncharacterized protein OS=Picea... 91 2e-17 tr|B8A0J3|B8A0J3_MAIZE Putative uncharacterized protein OS=Zea m... 90 5e-17 tr|B7E3N1|B7E3N1_ORYSJ cDNA clone:001-027-A05, full insert seque... 90 5e-17 tr|B6TPN9|B6TPN9_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17 tr|B6TIA2|B6TIA2_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17 tr|B6SX68|B6SX68_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17 tr|B4FMW5|B4FMW5_MAIZE Putative uncharacterized protein OS=Zea m... 90 5e-17 tr|B4FHM5|B4FHM5_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17 tr|A7PK59|A7PK59_VITVI Chromosome chr15 scaffold_19, whole genom... 90 5e-17 tr|A2ZWJ4|A2ZWJ4_ORYSJ Putative uncharacterized protein OS=Oryza... 90 5e-17 tr|A2Y7B6|A2Y7B6_ORYSI Putative uncharacterized protein OS=Oryza... 90 5e-17 tr|Q5GMM4|Q5GMM4_CAPCH 60S ribosomal protein L37a OS=Capsicum ch... 90 6e-17 tr|B7FGL8|B7FGL8_MEDTR Putative uncharacterized protein OS=Medic... 90 6e-17 tr|A9PAM1|A9PAM1_POPTR Putative uncharacterized protein OS=Popul... 90 6e-17 tr|A7PCH9|A7PCH9_VITVI Chromosome chr2 scaffold_11, whole genome... 90 6e-17 tr|B6T831|B6T831_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 88 2e-16 tr|A9RCY9|A9RCY9_PHYPA Predicted protein OS=Physcomitrella paten... 88 2e-16 tr|A9RBA3|A9RBA3_PHYPA Predicted protein (Fragment) OS=Physcomit... 88 2e-16 tr|A8HY08|A8HY08_CHLRE Ribosomal protein L37a OS=Chlamydomonas r... 86 7e-16 tr|Q4PBJ5|Q4PBJ5_USTMA Putative uncharacterized protein OS=Ustil... 70 7e-11 tr|Q5KLK6|Q5KLK6_CRYNE 60s ribosomal protein l37a, putative (Put... 69 1e-10 tr|Q6CPC5|Q6CPC5_KLULA KLLA0E05941p OS=Kluyveromyces lactis GN=K... 69 2e-10 tr|A6R893|A6R893_AJECN 60S ribosomal protein L43 OS=Ajellomyces ... 69 2e-10 tr|A2QK12|A2QK12_ASPNC Contig An04c0310, complete genome OS=Aspe... 68 2e-10 tr|B8C9Z3|B8C9Z3_THAPS Predicted protein OS=Thalassiosira pseudo... 67 3e-10 tr|B3LLA2|B3LLA2_YEAS1 Ribosomal protein L43A (Fragment) OS=Sacc... 67 3e-10 tr|A6ZQ50|A6ZQ50_YEAS7 Ribosomal protein L43B (Ribosomal protein... 67 3e-10 tr|A3LVS4|A3LVS4_PICST Predicted protein (Fragment) OS=Pichia st... 67 3e-10
>tr|A9NL27|A9NL27_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 92
Score = 91.7 bits (226), Expect = 2e-17 Identities = 44/48 (91%), Positives = 44/48 (91%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVEG 144 FAVKRKAVGIW CKDC KIKAGGAYTLNT SAVTVRSTIRRLREQ EG Sbjct: 45 FAVKRKAVGIWGCKDCGKIKAGGAYTLNTPSAVTVRSTIRRLREQTEG 92
>tr|A9PAT8|A9PAT8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 92
Score = 91.3 bits (225), Expect = 2e-17 Identities = 43/47 (91%), Positives = 45/47 (95%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 +AVKRKAVGIWSCKDC K+KAGGAYTLNTASAVTVRSTIRRLREQ E Sbjct: 45 YAVKRKAVGIWSCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
>tr|A9NT67|A9NT67_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 92
Score = 91.3 bits (225), Expect = 2e-17 Identities = 43/48 (89%), Positives = 44/48 (91%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVEG 144 FAVKRKAVGIW CKDC K+KAGGAYTLNT SAVTVRSTIRRLREQ EG Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTEG 92
>tr|B8A0J3|B8A0J3_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 102
Score = 90.1 bits (222), Expect = 5e-17 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 55 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 101
>tr|B7E3N1|B7E3N1_ORYSJ cDNA clone:001-027-A05, full insert sequence OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 92
Score = 90.1 bits (222), Expect = 5e-17 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91
>tr|B6TPN9|B6TPN9_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4 SV=1 Length = 95
Score = 90.1 bits (222), Expect = 5e-17 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 48 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 94
>tr|B6TIA2|B6TIA2_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4 SV=1 Length = 92
Score = 90.1 bits (222), Expect = 5e-17 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91
>tr|B6SX68|B6SX68_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4 SV=1 Length = 95
Score = 90.1 bits (222), Expect = 5e-17 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 48 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 94
>tr|B4FMW5|B4FMW5_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 95
Score = 90.1 bits (222), Expect = 5e-17 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 48 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 94
>tr|B4FHM5|B4FHM5_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4 SV=1 Length = 92
Score = 90.1 bits (222), Expect = 5e-17 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = +1
Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141 FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91
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