DK944340
Clone id YMU02A01NGRL0005_L24
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_L24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TTTGCAGTGAAGAGGAAAGCTGTTGGAATCTGGTCCTGCAAGGACTGCAACAAGATCAAG
GCCGGTGGTGCCTACACGTTAAATACTGCCAGTGCTGTAACTGTGCGTAGTACCATCAGA
CGATTGAGGGAGCAGGTTGAAGGATAGACTGCTGATTTGAGTGCATGTAGTCAGAGTGGA
ATTGTAACTGCAGCTGCTGCAAATTTTGCTAATATGAAAACCTCTTGAACGTATTTAGTT
GCTATGTGTCTCACAGCAGGGGAATGGATTCTCATTATTGCAGTTCTTGATGGGCTTGGG
GATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9ZRS8
Definition sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga menziesii
Align length 48
Score (bit) 91.3
E-value 1.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944340|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_L24, 5'
(305 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga ... 91 1e-18
sp|Q8RXU5|R37A2_ARATH 60S ribosomal protein L37a-2 OS=Arabidopsi... 91 2e-18
sp|Q5QM99|RL37A_ORYSJ 60S ribosomal protein L37a OS=Oryza sativa... 90 3e-18
sp|Q9XHE4|RL37A_GOSHI 60S ribosomal protein L37a OS=Gossypium hi... 87 3e-17
sp|P43209|RL37A_BRARA 60S ribosomal protein L37a OS=Brassica rap... 86 4e-17
sp|Q9SRK6|R37A1_ARATH Putative 60S ribosomal protein L37a-1 OS=A... 86 4e-17
sp|A4S6Z4|RL37A_OSTLU 60S ribosomal protein L37a OS=Ostreococcus... 79 9e-15
sp|Q00VK4|RL37A_OSTTA 60S ribosomal protein L37a OS=Ostreococcus... 75 1e-13
sp|Q751L1|RL43_ASHGO 60S ribosomal protein L43 OS=Ashbya gossypi... 68 1e-11
sp|P49631|RL43_YEAST 60S ribosomal protein L43 OS=Saccharomyces ... 67 2e-11
sp|Q6FRG6|RL43_CANGA 60S ribosomal protein L43 OS=Candida glabra... 67 3e-11
sp|O61462|RL37A_CRYST 60S ribosomal protein L37a OS=Cryptochiton... 65 1e-10
sp|Q54UG4|RL37A_DICDI 60S ribosomal protein L37a OS=Dictyosteliu... 64 2e-10
sp|Q7SZB4|RL37A_XENLA 60S ribosomal protein L37a OS=Xenopus laev... 64 2e-10
sp|Q9U2A8|RL37A_CAEEL 60S ribosomal protein L37a OS=Caenorhabdit... 64 2e-10
sp|Q9Y0H7|RL37A_MYXGL 60S ribosomal protein L37a (Fragment) OS=M... 62 7e-10
sp|P32046|RL37A_CHICK 60S ribosomal protein L37a OS=Gallus gallu... 62 9e-10
sp|Q9HGL8|RL43A_SCHPO 60S ribosomal protein L43-A OS=Schizosacch... 61 2e-09
sp|O17307|RL37A_SCHMA 60S ribosomal protein L37a (Fragment) OS=S... 61 2e-09
sp|P61515|RL37A_RAT 60S ribosomal protein L37a OS=Rattus norvegi... 61 2e-09
sp|Q5RBF9|RL37A_PONAB 60S ribosomal protein L37a OS=Pongo abelii... 61 2e-09
sp|P61514|RL37A_MOUSE 60S ribosomal protein L37a OS=Mus musculus... 61 2e-09
sp|P61513|RL37A_HUMAN 60S ribosomal protein L37a OS=Homo sapiens... 61 2e-09
sp|Q3MIC0|RL37A_BOVIN 60S ribosomal protein L37a OS=Bos taurus G... 61 2e-09
sp|O94686|RL43B_SCHPO 60S ribosomal protein L43-B OS=Schizosacch... 60 3e-09
sp|O61598|RL37A_OSTOS 60S ribosomal protein L37a OS=Ostertagia o... 60 4e-09
sp|Q90YT0|RL37A_ICTPU 60S ribosomal protein L37a OS=Ictalurus pu... 60 4e-09
sp|Q9VMU4|RL37A_DROME 60S ribosomal protein L37a OS=Drosophila m... 57 4e-08
sp|O96184|RL37A_PLAF7 60S ribosomal protein L37a OS=Plasmodium f... 54 2e-07
sp|A6NKH3|RL37L_HUMAN Putative 60S ribosomal protein L37a-like O... 49 1e-05

>sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga
menziesii GN=RPL37A PE=3 SV=1
Length = 92

Score = 91.3 bits (225), Expect = 1e-18
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVEG 144
FAVKRKAVGIW CKDC K+KAGGAYTLNT SAVTVRSTIRRLREQ EG
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTEG 92


>sp|Q8RXU5|R37A2_ARATH 60S ribosomal protein L37a-2 OS=Arabidopsis
thaliana GN=RPL37AC PE=2 SV=1
Length = 92

Score = 90.9 bits (224), Expect = 2e-18
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVEG 144
+ VKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ+EG
Sbjct: 45 YGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIEG 92


>sp|Q5QM99|RL37A_ORYSJ 60S ribosomal protein L37a OS=Oryza sativa
subsp. japonica GN=Os01g0679700 PE=1 SV=1
Length = 92

Score = 90.1 bits (222), Expect = 3e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91


>sp|Q9XHE4|RL37A_GOSHI 60S ribosomal protein L37a OS=Gossypium
hirsutum GN=RPL37A PE=3 SV=1
Length = 92

Score = 86.7 bits (213), Expect = 3e-17
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
+AVKRKAVGIW CK C K+KAGGAYTLNTASAVTVRSTIRRLREQ E
Sbjct: 45 YAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>sp|P43209|RL37A_BRARA 60S ribosomal protein L37a OS=Brassica rapa
GN=RPL37A PE=3 SV=2
Length = 93

Score = 86.3 bits (212), Expect = 4e-17
Identities = 41/49 (83%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRS-TIRRLREQVEG 144
+ VKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRS TIRRLREQ+EG
Sbjct: 45 YGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSHTIRRLREQIEG 93


>sp|Q9SRK6|R37A1_ARATH Putative 60S ribosomal protein L37a-1
OS=Arabidopsis thaliana GN=RPL37AB PE=2 SV=1
Length = 92

Score = 86.3 bits (212), Expect = 4e-17
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
++VKRK VGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 45 YSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91


>sp|A4S6Z4|RL37A_OSTLU 60S ribosomal protein L37a OS=Ostreococcus
lucimarinus (strain CCE9901) GN=RPL37a PE=3 SV=1
Length = 92

Score = 78.6 bits (192), Expect = 9e-15
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
+ +KRKAVGIWSCK CNK KAGGAY+LNT +VTVRSTIRRLRE E
Sbjct: 45 YGMKRKAVGIWSCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91


>sp|Q00VK4|RL37A_OSTTA 60S ribosomal protein L37a OS=Ostreococcus
tauri GN=RPL37a PE=3 SV=2
Length = 92

Score = 75.1 bits (183), Expect = 1e-13
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
+ +KR+AVGIW CK CNK KAGGAY+LNT +VTVRSTIRRLRE E
Sbjct: 45 YGMKRQAVGIWCCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91


>sp|Q751L1|RL43_ASHGO 60S ribosomal protein L43 OS=Ashbya gossypii
GN=RPL43 PE=3 SV=1
Length = 92

Score = 68.2 bits (165), Expect = 1e-11
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = +1

Query: 4 AVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
AVKR A GIW+C C K AGGAYT +TA+A TVRSTIRRLRE E
Sbjct: 46 AVKRGAAGIWNCSSCKKTVAGGAYTFSTAAAATVRSTIRRLREMAE 91


>sp|P49631|RL43_YEAST 60S ribosomal protein L43 OS=Saccharomyces
cerevisiae GN=RPL43A PE=1 SV=2
Length = 92

Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +1

Query: 7 VKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
VKR A GIW+C C K AGGAYT++TA+A TVRSTIRRLRE VE
Sbjct: 47 VKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVE 91


tr_hit_id A9NL27
Definition tr|A9NL27|A9NL27_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 48
Score (bit) 91.7
E-value 2.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944340|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_L24, 5'
(305 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NL27|A9NL27_PICSI Putative uncharacterized protein OS=Picea... 92 2e-17
tr|A9PAT8|A9PAT8_POPTR Putative uncharacterized protein OS=Popul... 91 2e-17
tr|A9NT67|A9NT67_PICSI Putative uncharacterized protein OS=Picea... 91 2e-17
tr|B8A0J3|B8A0J3_MAIZE Putative uncharacterized protein OS=Zea m... 90 5e-17
tr|B7E3N1|B7E3N1_ORYSJ cDNA clone:001-027-A05, full insert seque... 90 5e-17
tr|B6TPN9|B6TPN9_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17
tr|B6TIA2|B6TIA2_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17
tr|B6SX68|B6SX68_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17
tr|B4FMW5|B4FMW5_MAIZE Putative uncharacterized protein OS=Zea m... 90 5e-17
tr|B4FHM5|B4FHM5_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 90 5e-17
tr|A7PK59|A7PK59_VITVI Chromosome chr15 scaffold_19, whole genom... 90 5e-17
tr|A2ZWJ4|A2ZWJ4_ORYSJ Putative uncharacterized protein OS=Oryza... 90 5e-17
tr|A2Y7B6|A2Y7B6_ORYSI Putative uncharacterized protein OS=Oryza... 90 5e-17
tr|Q5GMM4|Q5GMM4_CAPCH 60S ribosomal protein L37a OS=Capsicum ch... 90 6e-17
tr|B7FGL8|B7FGL8_MEDTR Putative uncharacterized protein OS=Medic... 90 6e-17
tr|A9PAM1|A9PAM1_POPTR Putative uncharacterized protein OS=Popul... 90 6e-17
tr|A7PCH9|A7PCH9_VITVI Chromosome chr2 scaffold_11, whole genome... 90 6e-17
tr|B6T831|B6T831_MAIZE 60S ribosomal protein L37a OS=Zea mays PE... 88 2e-16
tr|A9RCY9|A9RCY9_PHYPA Predicted protein OS=Physcomitrella paten... 88 2e-16
tr|A9RBA3|A9RBA3_PHYPA Predicted protein (Fragment) OS=Physcomit... 88 2e-16
tr|A8HY08|A8HY08_CHLRE Ribosomal protein L37a OS=Chlamydomonas r... 86 7e-16
tr|Q4PBJ5|Q4PBJ5_USTMA Putative uncharacterized protein OS=Ustil... 70 7e-11
tr|Q5KLK6|Q5KLK6_CRYNE 60s ribosomal protein l37a, putative (Put... 69 1e-10
tr|Q6CPC5|Q6CPC5_KLULA KLLA0E05941p OS=Kluyveromyces lactis GN=K... 69 2e-10
tr|A6R893|A6R893_AJECN 60S ribosomal protein L43 OS=Ajellomyces ... 69 2e-10
tr|A2QK12|A2QK12_ASPNC Contig An04c0310, complete genome OS=Aspe... 68 2e-10
tr|B8C9Z3|B8C9Z3_THAPS Predicted protein OS=Thalassiosira pseudo... 67 3e-10
tr|B3LLA2|B3LLA2_YEAS1 Ribosomal protein L43A (Fragment) OS=Sacc... 67 3e-10
tr|A6ZQ50|A6ZQ50_YEAS7 Ribosomal protein L43B (Ribosomal protein... 67 3e-10
tr|A3LVS4|A3LVS4_PICST Predicted protein (Fragment) OS=Pichia st... 67 3e-10

>tr|A9NL27|A9NL27_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 92

Score = 91.7 bits (226), Expect = 2e-17
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVEG 144
FAVKRKAVGIW CKDC KIKAGGAYTLNT SAVTVRSTIRRLREQ EG
Sbjct: 45 FAVKRKAVGIWGCKDCGKIKAGGAYTLNTPSAVTVRSTIRRLREQTEG 92


>tr|A9PAT8|A9PAT8_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 92

Score = 91.3 bits (225), Expect = 2e-17
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
+AVKRKAVGIWSCKDC K+KAGGAYTLNTASAVTVRSTIRRLREQ E
Sbjct: 45 YAVKRKAVGIWSCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>tr|A9NT67|A9NT67_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 92

Score = 91.3 bits (225), Expect = 2e-17
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVEG 144
FAVKRKAVGIW CKDC K+KAGGAYTLNT SAVTVRSTIRRLREQ EG
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTEG 92


>tr|B8A0J3|B8A0J3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 102

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 55 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 101


>tr|B7E3N1|B7E3N1_ORYSJ cDNA clone:001-027-A05, full insert sequence
OS=Oryza sativa subsp. japonica PE=4 SV=1
Length = 92

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91


>tr|B6TPN9|B6TPN9_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4
SV=1
Length = 95

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 48 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 94


>tr|B6TIA2|B6TIA2_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4
SV=1
Length = 92

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91


>tr|B6SX68|B6SX68_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4
SV=1
Length = 95

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 48 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 94


>tr|B4FMW5|B4FMW5_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 95

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 48 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 94


>tr|B4FHM5|B4FHM5_MAIZE 60S ribosomal protein L37a OS=Zea mays PE=4
SV=1
Length = 92

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1

Query: 1 FAVKRKAVGIWSCKDCNKIKAGGAYTLNTASAVTVRSTIRRLREQVE 141
FAVKRKAVGIW CKDC K+KAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91