BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944343|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_M05, 5'
         (340 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P35729|NU120_YEAST Nucleoporin NUP120 OS=Saccharomyces cerevi...    29   8.3  

>sp|P35729|NU120_YEAST Nucleoporin NUP120 OS=Saccharomyces
           cerevisiae GN=NUP120 PE=1 SV=1
          Length = 1037

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -2

Query: 333 TLCKYVSARRGNEGSR*CTKMF-TNLDKP-GSIYSNCLFLSGSVRLS---DE*STILDVY 169
           T+  YVS    N G +   K   T + +P GS YSNCL LS S  +       ST+L  Y
Sbjct: 23  TVDLYVSNNSNNNGLKEGDKSISTPVPQPYGSEYSNCLLLSNSEYICYHFSSRSTLLTFY 82

Query: 168 P 166
           P
Sbjct: 83  P 83

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944343|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_M05, 5'
         (340 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******