NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944344
Clone id YMU02A01NGRL0005_M06
Library
Length 426
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_M06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GGAAATTCCAGTATAAAACTGACATGACTGGGATCGTGCCCTTGCCTGTTGTCGCCACCT
CTTTCCCAACGCAGGACCTCCTTACAAGCCTCACAGCTGTGGCATGACTCTCTGGATTCG
AACAAGCCGACAGGAGCCAAAGGTGTGTATTGCACAACTGCCTTTGTATGTCCCACAATG
CGGCCATCTTTCAAGGCGAATGCAACTGAGCTGCGAGAACGCACGCTCTCATAACTCAGA
AACGAATATTAGAATGCTCTGGTTTGCCAAAGGAAGTCTACATGAGCTCTTTGTCGATTT
CGGGAGCTTGTGTTTGCCTATCTCTCTTTTCCACCACACACGTCTTAAGTGATGGTTTTT
TGTATCAAACACAAAATAAAATAAAACCCAAACCTGTGTCGGCCGCCTCGGCCCTCGAAA
ATCTTT
■■Homology search results ■■ -
sp_hit_id P51338
Definition sp|P51338|RK1_PORPU 50S ribosomal protein L1, chloroplastic OS=Porphyra purpurea
Align length 36
Score (bit) 40.4
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944344|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_M06, 5'
         (399 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P51338|RK1_PORPU 50S ribosomal protein L1, chloroplastic OS=P...    40   4e-06
sp|O78413|RK1_GUITH 50S ribosomal protein L1, chloroplastic OS=G...    41   2e-04
sp|Q2JTQ5|RL1_SYNJA 50S ribosomal protein L1 OS=Synechococcus sp...    41   2e-04
sp|Q2JM50|RL1_SYNJB 50S ribosomal protein L1 OS=Synechococcus sp...    40   3e-04
sp|A6MVP8|RK1_RHDSA 50S ribosomal protein L1, chloroplastic OS=R...    43   6e-04
sp|Q9LY66|RK1_ARATH 50S ribosomal protein L1, chloroplastic OS=A...    43   6e-04
sp|Q9TM00|RK1_CYACA 50S ribosomal protein L1, chloroplastic OS=C...    40   7e-04
sp|Q119S7|RL1_TRIEI 50S ribosomal protein L1 OS=Trichodesmium er...    39   0.002
sp|Q8DM27|RL1_THEEB 50S ribosomal protein L1 OS=Thermosynechococ...    40   0.003
sp|B0CAD0|RL1_ACAM1 50S ribosomal protein L1 OS=Acaryochloris ma...    40   0.004
sp|Q9LE95|RK1_SPIOL 50S ribosomal protein L1, chloroplastic OS=S...    40   0.004
sp|Q1XDE9|RK1_PORYE 50S ribosomal protein L1, chloroplastic OS=P...    40   0.005
sp|A0T0C1|RK1_PHATR 50S ribosomal protein L1, chloroplastic OS=P...    35   0.007
sp|Q7VDY6|RL1_PROMA 50S ribosomal protein L1 OS=Prochlorococcus ...    39   0.008
sp|A2BUI0|RL1_PROM5 50S ribosomal protein L1 OS=Prochlorococcus ...    39   0.008
sp|Q3MA18|RL1_ANAVT 50S ribosomal protein L1 OS=Anabaena variabi...    39   0.008
sp|Q8YLJ7|RL1_ANASP 50S ribosomal protein L1 OS=Anabaena sp. (st...    39   0.008
sp|Q3A9Q3|RL1_CARHZ 50S ribosomal protein L1 OS=Carboxydothermus...    30   0.012
sp|A0T0Q6|RK1_THAPS 50S ribosomal protein L1, chloroplastic OS=T...    35   0.012
sp|P49544|RK1_ODOSI 50S ribosomal protein L1, chloroplastic OS=O...    36   0.016
sp|Q7V478|RL1_PROMM 50S ribosomal protein L1 OS=Prochlorococcus ...    38   0.018
sp|A2CDE8|RL1_PROM3 50S ribosomal protein L1 OS=Prochlorococcus ...    38   0.018
sp|A3PAS1|RL1_PROM0 50S ribosomal protein L1 OS=Prochlorococcus ...    38   0.018
sp|B0JNQ5|RL1_MICAN 50S ribosomal protein L1 OS=Microcystis aeru...    38   0.018
sp|A2BNZ8|RL1_PROMS 50S ribosomal protein L1 OS=Prochlorococcus ...    37   0.023
sp|A4J100|RL1_DESRM 50S ribosomal protein L1 OS=Desulfotomaculum...    30   0.027
sp|Q3AGT0|RL1_SYNSC 50S ribosomal protein L1 OS=Synechococcus sp...    37   0.030
sp|Q3AUJ6|RL1_SYNS9 50S ribosomal protein L1 OS=Synechococcus sp...    37   0.030
sp|Q7U3T7|RL1_SYNPX 50S ribosomal protein L1 OS=Synechococcus sp...    37   0.030
sp|Q5N3N8|RL1_SYNP6 50S ribosomal protein L1 OS=Synechococcus sp...    36   0.052

>sp|P51338|RK1_PORPU 50S ribosomal protein L1, chloroplastic
           OS=Porphyra purpurea GN=rpl1 PE=3 SV=1
          Length = 229

 Score = 40.4 bits (93), Expect(2) = 4e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATEL 213
           DS+D NKP+G+KG Y  T F+  TM PS + + T L
Sbjct: 193 DSIDKNKPSGSKGKYWKTFFLSSTMGPSIQIDITSL 228



 Score = 29.3 bits (64), Expect(2) = 4e-06
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+ D TGI+ +P   +SFP +D
Sbjct: 159 KVEYRVDRTGIIHVPFGKSSFPEED 183


>sp|O78413|RK1_GUITH 50S ribosomal protein L1, chloroplastic
           OS=Guillardia theta GN=rpl1 PE=3 SV=1
          Length = 234

 Score = 41.2 bits (95), Expect(2) = 2e-04
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRER 222
           +S+D N+P G KG Y  + ++C TM PS + + +E R++
Sbjct: 193 ESIDKNRPAGVKGKYWKSFYICSTMGPSIQLDISEFRDK 231



 Score = 22.7 bits (47), Expect(2) = 2e-04
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+ D +GIV +    T+F   D
Sbjct: 159 KLEYRADKSGIVHISFGKTNFSVND 183


>sp|Q2JTQ5|RL1_SYNJA 50S ribosomal protein L1 OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=rplA PE=3 SV=1
          Length = 236

 Score = 40.8 bits (94), Expect(2) = 2e-04
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTL 228
           +S+D N+P GAKG Y     VC TM PS + +   LRE  L
Sbjct: 194 ESIDRNRPPGAKGKYWRALHVCATMGPSIEVDINALRELKL 234



 Score = 23.1 bits (48), Expect(2) = 2e-04
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQ 74
           K +Y+ D TGIV L      FP +
Sbjct: 160 KLEYRADKTGIVHLIFGKCKFPVE 183


>sp|Q2JM50|RL1_SYNJB 50S ribosomal protein L1 OS=Synechococcus sp.
           GN=rplA PE=3 SV=1
          Length = 236

 Score = 40.0 bits (92), Expect(2) = 3e-04
 Identities = 19/42 (45%), Positives = 26/42 (61%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTLS 231
           +S+D N+P+GAKG Y  T  V  TM PS + +   LRE  L+
Sbjct: 194 ESIDRNRPSGAKGKYWRTLHVSATMGPSIEVDINALRELKLA 235



 Score = 23.1 bits (48), Expect(2) = 3e-04
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQ 74
           K +Y+ D TGIV L      FP +
Sbjct: 160 KLEYRADRTGIVHLIFGKCKFPVE 183


>sp|A6MVP8|RK1_RHDSA 50S ribosomal protein L1, chloroplastic
           OS=Rhodomonas salina GN=rpl1 PE=3 SV=1
          Length = 234

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 16/42 (38%), Positives = 28/42 (66%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTLS 231
           +S+D N+P+G KG Y  + ++C TM PS + + +E R++  S
Sbjct: 193 ESIDKNRPSGVKGRYWKSFYICSTMGPSIQLDISEFRDKVFS 234


>sp|Q9LY66|RK1_ARATH 50S ribosomal protein L1, chloroplastic
           OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1
          Length = 346

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +1

Query: 109 SLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATEL 213
           S+++NKP GAKGVY  +A +C +M PS K N  E+
Sbjct: 303 SVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREM 337


>sp|Q9TM00|RK1_CYACA 50S ribosomal protein L1, chloroplastic
           OS=Cyanidium caldarium GN=rpl1 PE=3 SV=1
          Length = 240

 Score = 40.0 bits (92), Expect(2) = 7e-04
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 109 SLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRE 219
           S+D N+P GAKG Y    ++C TM P+ K +  +L+E
Sbjct: 196 SIDQNRPNGAKGKYWKNMYLCTTMSPAIKIDFNKLQE 232



 Score = 21.9 bits (45), Expect(2) = 7e-04
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+TD +GIV   +    F  +D
Sbjct: 161 KLEYRTDKSGIVHSIIGKIDFTAED 185


>sp|Q119S7|RL1_TRIEI 50S ribosomal protein L1 OS=Trichodesmium
           erythraeum (strain IMS101) GN=rplA PE=3 SV=1
          Length = 238

 Score = 38.5 bits (88), Expect(2) = 0.002
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTLS 231
           + +D N+P+GAKG Y  T FV  TM PS + + + L++  L+
Sbjct: 194 ECIDRNRPSGAKGRYWRTIFVSATMGPSIEIDVSSLQDLKLT 235



 Score = 22.3 bits (46), Expect(2) = 0.002
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +++ D +GIV +    TSF  +D
Sbjct: 160 KLEFRADRSGIVHVMFGKTSFSVED 184


>sp|Q8DM27|RL1_THEEB 50S ribosomal protein L1 OS=Thermosynechococcus
           elongatus (strain BP-1) GN=rplA PE=3 SV=1
          Length = 237

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTLS 231
           +S+D N+P+GAKG Y  + +V  TM PS + +   LRE  L+
Sbjct: 193 ESIDRNRPSGAKGRYWRSVYVAATMGPSIQVDINALRELKLA 234


>sp|B0CAD0|RL1_ACAM1 50S ribosomal protein L1 OS=Acaryochloris
           marina (strain MBIC 11017) GN=rplA PE=3 SV=1
          Length = 236

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTLS 231
           D++D N+P+GAKG Y  + +V  TM PS + + + LR+  L+
Sbjct: 194 DTIDRNRPSGAKGRYWRSLYVSATMGPSIEVDISSLRDLNLT 235
tr_hit_id A9P244
Definition tr|A9P244|A9P244_PICSI Ribosomal protein L1 OS=Picea sitchensis
Align length 38
Score (bit) 45.4
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944344|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_M06, 5'
         (399 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P244|A9P244_PICSI Ribosomal protein L1 OS=Picea sitchensis ...    45   1e-06
tr|B8AXU6|B8AXU6_ORYSI Putative uncharacterized protein OS=Oryza...    45   7e-06
tr|A3B3M6|A3B3M6_ORYSJ Ribosomal protein L1 OS=Oryza sativa subs...    45   7e-06
tr|Q60E59|Q60E59_ORYSJ Ribosomal protein L1 OS=Oryza sativa subs...    45   7e-06
tr|B6TN03|B6TN03_MAIZE 50S ribosomal protein L1 OS=Zea mays PE=2...    45   2e-05
tr|A9SYG8|A9SYG8_PHYPA Ribosomal protein L1 (Fragment) OS=Physco...    51   3e-05
tr|A9RHR2|A9RHR2_PHYPA Ribosomal protein L1 (Fragment) OS=Physco...    49   2e-04
tr|B2JA75|B2JA75_NOSP7 Ribosomal protein L1 OS=Nostoc punctiform...    43   0.001
tr|A9PFW5|A9PFW5_POPTR Ribosomal protein L1 OS=Populus trichocar...    44   0.005
tr|A8I8Z4|A8I8Z4_CHLRE Ribosomal protein L1 OS=Chlamydomonas rei...    44   0.005
tr|A9PK56|A9PK56_POPJC Ribosomal protein L1 OS=Populus jackii PE...    43   0.007
tr|A7Q228|A7Q228_VITVI Ribosomal protein L1 OS=Vitis vinifera GN...    42   0.012
tr|B2XTJ8|B2XTJ8_HETA4 50S ribosomal protein L1 OS=Heterosigma a...    39   0.012
tr|B2XT38|B2XT38_HETA2 50S ribosomal protein L1 OS=Heterosigma a...    39   0.012
tr|A0ZHA7|A0ZHA7_NODSP Ribosomal protein L1 OS=Nodularia spumige...    42   0.020
tr|A0YKG0|A0YKG0_9CYAN Ribosomal protein L1 OS=Lyngbya sp. PCC 8...    36   0.075
tr|Q05VH3|Q05VH3_9SYNE Ribosomal protein L1 OS=Synechococcus sp....    39   0.098
tr|B7KIR7|B7KIR7_9CHRO Ribosomal protein L1 OS=Cyanothece sp. PC...    39   0.13 
tr|B8LEQ4|B8LEQ4_THAPS RK1, ribosomal protein 1 OS=Thalassiosira...    35   0.16 
tr|B7T1U7|B7T1U7_VAULI Ribosomal protiein L1 OS=Vaucheria litore...    38   0.22 
tr|A8YGI8|A8YGI8_MICAE Ribosomal protein L1 OS=Microcystis aerug...    38   0.28 
tr|B8HVL4|B8HVL4_9CHRO Ribosomal protein L1 OS=Cyanothece sp. PC...    37   0.37 
tr|B4AY79|B4AY79_9CHRO Ribosomal protein L1 OS=Cyanothece sp. PC...    37   0.37 
tr|Q4BZ08|Q4BZ08_CROWT Ribosomal protein L1 OS=Crocosphaera wats...    37   0.48 
tr|Q061Q0|Q061Q0_9SYNE Ribosomal protein L1 OS=Synechococcus sp....    37   0.48 
tr|B1X4C8|B1X4C8_PAUCH 50S ribosomal protein L1 OS=Paulinella ch...    37   0.48 
tr|B7JWT7|B7JWT7_SYNP8 Ribosomal protein L1 OS=Synechococcus sp....    36   0.83 
tr|B4C0M1|B4C0M1_9CHRO Ribosomal protein L1 OS=Cyanothece sp. PC...    36   0.83 
tr|A4CY19|A4CY19_SYNPV Ribosomal protein L1 OS=Synechococcus sp....    36   0.83 
tr|A3Z3D4|A3Z3D4_9SYNE Ribosomal protein L1 OS=Synechococcus sp....    36   0.83 

>tr|A9P244|A9P244_PICSI Ribosomal protein L1 OS=Picea sitchensis
           PE=2 SV=1
          Length = 368

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRE 219
           +S+D+NKP+GAKGVY  TA +C TM PS +    + RE
Sbjct: 326 NSVDTNKPSGAKGVYWKTAHICATMGPSIRLIIKDTRE 363



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+ D TGIV +P   T FP +D
Sbjct: 292 KVEYRADKTGIVHIPFGKTDFPEED 316


>tr|B8AXU6|B8AXU6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19812 PE=4 SV=1
          Length = 414

 Score = 44.7 bits (104), Expect(2) = 7e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +1

Query: 109 SLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATEL 213
           S++ NKP+GAKG+Y  TA++C +M PS K N  E+
Sbjct: 371 SVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEM 405



 Score = 28.1 bits (61), Expect(2) = 7e-06
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+ D TGIV +P     FP +D
Sbjct: 336 KVEYRVDKTGIVHIPFGKVDFPEED 360


>tr|A3B3M6|A3B3M6_ORYSJ Ribosomal protein L1 OS=Oryza sativa subsp.
           japonica GN=OsJ_017648 PE=3 SV=1
          Length = 371

 Score = 44.7 bits (104), Expect(2) = 7e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +1

Query: 109 SLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATEL 213
           S++ NKP+GAKG+Y  TA++C +M PS K N  E+
Sbjct: 328 SVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEM 362



 Score = 28.1 bits (61), Expect(2) = 7e-06
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+ D TGIV +P     FP +D
Sbjct: 293 KVEYRVDKTGIVHIPFGKVDFPEED 317


>tr|Q60E59|Q60E59_ORYSJ Ribosomal protein L1 OS=Oryza sativa subsp.
           japonica GN=OSJNBa0073E05.17 PE=2 SV=1
          Length = 359

 Score = 44.7 bits (104), Expect(2) = 7e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +1

Query: 109 SLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATEL 213
           S++ NKP+GAKG+Y  TA++C +M PS K N  E+
Sbjct: 316 SVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEM 350



 Score = 28.1 bits (61), Expect(2) = 7e-06
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+ D TGIV +P     FP +D
Sbjct: 281 KVEYRVDKTGIVHIPFGKVDFPEED 305


>tr|B6TN03|B6TN03_MAIZE 50S ribosomal protein L1 OS=Zea mays PE=2
           SV=1
          Length = 345

 Score = 44.7 bits (104), Expect(2) = 2e-05
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +1

Query: 109 SLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATEL 213
           S++ NKP+GAKG+Y  TA++C +M PS K N  E+
Sbjct: 302 SVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEM 336



 Score = 26.6 bits (57), Expect(2) = 2e-05
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +Y+ D +GIV +P     FP +D
Sbjct: 267 KVEYRVDKSGIVHIPFGKVDFPEED 291


>tr|A9SYG8|A9SYG8_PHYPA Ribosomal protein L1 (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_15255 PE=3 SV=1
          Length = 264

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRE 219
           +S+D+NKP+GAKGVY  +A VC TM PS + N +ELR+
Sbjct: 225 NSVDANKPSGAKGVYWKSAHVCTTMGPSIRINVSELRD 262


>tr|A9RHR2|A9RHR2_PHYPA Ribosomal protein L1 (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_24284 PE=3 SV=1
          Length = 264

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/38 (52%), Positives = 29/38 (76%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRE 219
           +S+D+N+P+GAKGVY  +A +C TM PS + N  ELR+
Sbjct: 225 NSVDANRPSGAKGVYWKSAHICTTMGPSIRLNVPELRD 262


>tr|B2JA75|B2JA75_NOSP7 Ribosomal protein L1 OS=Nostoc punctiforme
           (strain ATCC 29133 / PCC 73102) GN=Npun_F5852 PE=4 SV=1
          Length = 237

 Score = 43.1 bits (100), Expect(2) = 0.001
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTLS 231
           +++D N+P+GAKG Y  T +V  TM PS K + T LR+  LS
Sbjct: 193 ETIDRNRPSGAKGRYWRTFYVSATMGPSIKIDVTALRDLKLS 234



 Score = 22.3 bits (46), Expect(2) = 0.001
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KFQYKTDMTGIVPLPVVATSFPTQD 77
           K +++ D TGIV +    T+F  +D
Sbjct: 159 KLEFRADRTGIVHVMFGKTTFSPED 183


>tr|A9PFW5|A9PFW5_POPTR Ribosomal protein L1 OS=Populus trichocarpa
           PE=2 SV=1
          Length = 355

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +1

Query: 109 SLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELRERTL 228
           S ++NKP+GAKGVY  +A +C +M PS + N  E+ E  L
Sbjct: 312 SAEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLEYKL 351


>tr|A8I8Z4|A8I8Z4_CHLRE Ribosomal protein L1 OS=Chlamydomonas
           reinhardtii GN=PRPL1 PE=3 SV=1
          Length = 297

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +1

Query: 106 DSLDSNKPTGAKGVYCTTAFVCPTMRPSFKANATELR 216
           +S+D+NKP GAKGVY  + +VC TM PS +   + L+
Sbjct: 254 ESIDANKPPGAKGVYWKSMYVCTTMGPSLRIGVSALQ 290