DK944363 [AcEST]

DK944363
Clone id	YMU02A01NGRL0005_N06
Library	YMU02
Length	251
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_N06. 5' end sequence.
Accession	DK944363
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1075Contig1
Sequence	GTATGCTAAAGAGCTATGTCCTAAGCTATGCCACTGGAAAATTGGTTGGAGCATTCTGAG AGGCAGGTGTCATGGCATACGTTGAAGCCAGGTTTCTGTATTCTGTTTGGGAACAGTAGC CCGAGGCTTTATCAAAAAGTTATCTAGCTCTATGGATCTCATATGTACCTTTGTACCCTA TGTTTTTATTTGTTGGGAAAATTTTGACCCCTTTTTTATAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944363\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_N06, 5' (219 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A3DEP0
Definition	tr\|A3DEP0\|A3DEP0_CLOTH Putative uncharacterized protein OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Align length	27
Score (bit)	33.5
E-value	5.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944363\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_N06, 5' (219 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A3DEP0\|A3DEP0_CLOTH Putative uncharacterized protein OS=Clost... 33 5.5 tr\|B4BHQ0\|B4BHQ0_CLOTM Putative uncharacterized protein OS=Clost... 33 5.5 >tr\|A3DEP0\|A3DEP0_CLOTH Putative uncharacterized protein OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=Cthe_1187 PE=4 SV=1 Length = 284 Score = 33.5 bits (75), Expect = 5.5 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 123 EALSKSYLALWISYVPLYPMFLFVGKI 203 E + LALW+ ++P+Y +FLFV KI Sbjct: 125 EKIGHRLLALWVEFIPVYLLFLFVFKI 151 >tr\|B4BHQ0\|B4BHQ0_CLOTM Putative uncharacterized protein OS=Clostridium thermocellum DSM 4150 GN=CtherDRAFT_2916 PE=4 SV=1 Length = 284 Score = 33.5 bits (75), Expect = 5.5 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 123 EALSKSYLALWISYVPLYPMFLFVGKI 203 E + LALW+ ++P+Y +FLFV KI Sbjct: 125 EKIGHRLLALWVEFIPVYLLFLFVFKI 151