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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944367
Clone id YMU02A01NGRL0005_N10
Library
Length 260
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_N10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAGAAAGGTGTTTACTCTTTGAACAATTATCTACAGGTGAAAGCTGTTGTCACGCCCATT
AGAGATCCTGCTTGGCTGTAAATGTTGAATCAAAGCCCATTAGCTTGCTCTTTGAGAGTT
TGTTTCGGTTTTGCCTACTTGTAATCCTGAATTATGCATACATCTTGCCATGTCCAGTGT
AAAGCTTACCTCTTCCTTGTGTCTATAGCAATATGAAACAAAAGATTGGTAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8S528
Definition sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana
Align length 26
Score (bit) 50.1
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944367|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N10, 5'
         (230 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7,...    50   4e-06
sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4,...    47   2e-05
sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 ...    32   1.0  

>sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7,
           mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2
           SV=2
          Length = 534

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSLNNYLQVKAVVT +++PAWL
Sbjct: 509 EKGIYSLNNYLQVKAVVTSLKNPAWL 534


>sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4,
           mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1
           SV=1
          Length = 538

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSLNNYLQ+KAVVT +  PAW+
Sbjct: 513 EKGIYSLNNYLQIKAVVTALNKPAWI 538


>sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4
           OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2
          Length = 501

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           E G+ +L+NYLQ K+VV P+ +  W+
Sbjct: 476 ESGMDALDNYLQTKSVVMPLHNSPWM 501
tr_hit_id Q1AFF6
Definition tr|Q1AFF6|Q1AFF6_9MAGN Aldehyde dehydrogenase OS=Vitis pseudoreticulata
Align length 26
Score (bit) 52.8
E-value 9.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944367|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N10, 5'
         (230 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1AFF6|Q1AFF6_9MAGN Aldehyde dehydrogenase OS=Vitis pseudoret...    53   9e-06
tr|Q1AFF5|Q1AFF5_9MAGN Aldehyde dehydrogenase OS=Vitis pseudoret...    53   9e-06
tr|Q1AFF3|Q1AFF3_9MAGN Aldehyde dehydrogenase OS=Vitis pseudoret...    53   9e-06
tr|A7PD33|A7PD33_VITVI Chromosome chr17 scaffold_12, whole genom...    53   9e-06
tr|A5B038|A5B038_VITVI Putative uncharacterized protein OS=Vitis...    53   9e-06
tr|Q5Y2F1|Q5Y2F1_PINHA Aldehyde dehydrogenase (Fragment) OS=Pinu...    52   2e-05
tr|Q8LST5|Q8LST5_SORBI Mitochondrial aldehyde dehydrogenase OS=S...    51   3e-05
tr|Q84V96|Q84V96_LOTCO Aldehyde dehydrogenase 1 OS=Lotus cornicu...    51   3e-05
tr|A9NUF6|A9NUF6_PICSI Putative uncharacterized protein OS=Picea...    51   3e-05
tr|A7Q2D8|A7Q2D8_VITVI Chromosome chr1 scaffold_46, whole genome...    50   4e-05
tr|Q9LRI6|Q9LRI6_ORYSJ Os02g0730000 protein OS=Oryza sativa subs...    49   1e-04
tr|Q6YWQ9|Q6YWQ9_ORYSJ cDNA clone:001-130-H10, full insert seque...    49   1e-04
tr|B8AI10|B8AI10_ORYSI Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|A3AB04|A3AB04_ORYSJ Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|Q8RUR9|Q8RUR9_MAIZE Mitochondrial aldehyde dehydrogenase RF2B...    49   1e-04
tr|Q7FWR0|Q7FWR0_MAIZE Mitochondrial aldehyde dehydrogenase RF2B...    49   1e-04
tr|P93344|P93344_TOBAC Aldehyde dehydrogenase (NAD+) OS=Nicotian...    49   1e-04
tr|B6T715|B6T715_MAIZE Aldehyde dehydrogenase OS=Zea mays PE=2 SV=1    49   1e-04
tr|A7PMC7|A7PMC7_VITVI Chromosome chr14 scaffold_21, whole genom...    49   1e-04
tr|A5B4V3|A5B4V3_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04
tr|A7Q2D6|A7Q2D6_VITVI Chromosome chr1 scaffold_46, whole genome...    47   4e-04
tr|Q93Y76|Q93Y76_ATRBE Putative aldehyde dehydrogenase 2A (Fragm...    46   0.001
tr|Q94G64|Q94G64_MAIZE T-cytoplasm male sterility restorer facto...    45   0.002
tr|Q43274|Q43274_MAIZE Aldehyde dehydrogenase OS=Zea mays GN=rf2...    45   0.002
tr|B4FM48|B4FM48_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|Q9LLR2|Q9LLR2_ORYSA Aldehyde dehydrogenase OS=Oryza sativa GN...    45   0.002
tr|Q9FRX7|Q9FRX7_ORYSJ Os06g0270900 protein OS=Oryza sativa subs...    45   0.002
tr|Q8LST4|Q8LST4_SORBI Mitochondrial aldehyde dehydrogenase OS=S...    45   0.002
tr|A7P444|A7P444_VITVI Chromosome chr1 scaffold_5, whole genome ...    45   0.002
tr|A6MZT7|A6MZT7_ORYSI Mitochondrial aldehyde dehydrogenase (Fra...    45   0.002

>tr|Q1AFF6|Q1AFF6_9MAGN Aldehyde dehydrogenase OS=Vitis
           pseudoreticulata GN=ALDH2a PE=2 SV=1
          Length = 537

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+Y+LNNYLQVKAV+TP+R+PAWL
Sbjct: 512 EKGIYNLNNYLQVKAVITPLRNPAWL 537


>tr|Q1AFF5|Q1AFF5_9MAGN Aldehyde dehydrogenase OS=Vitis
           pseudoreticulata GN=ALDH1a PE=2 SV=1
          Length = 477

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+Y+LNNYLQVKAV+TP+R+PAWL
Sbjct: 452 EKGIYNLNNYLQVKAVITPLRNPAWL 477


>tr|Q1AFF3|Q1AFF3_9MAGN Aldehyde dehydrogenase OS=Vitis
           pseudoreticulata GN=ALDH2b PE=2 SV=1
          Length = 524

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+Y+LNNYLQVKAV+TP+R+PAWL
Sbjct: 499 EKGIYNLNNYLQVKAVITPLRNPAWL 524


>tr|A7PD33|A7PD33_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016121001
           PE=3 SV=1
          Length = 511

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSLNNYLQVKAV+TP+++PAWL
Sbjct: 486 EKGIYSLNNYLQVKAVITPLKNPAWL 511


>tr|A5B038|A5B038_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013710 PE=3 SV=1
          Length = 538

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSLNNYLQVKAV+TP+++PAWL
Sbjct: 513 EKGIYSLNNYLQVKAVITPLKNPAWL 538


>tr|Q5Y2F1|Q5Y2F1_PINHA Aldehyde dehydrogenase (Fragment) OS=Pinus
           halepensis PE=2 SV=1
          Length = 53

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSLNNYLQVKAVV+P+++PAWL
Sbjct: 28  EKGIYSLNNYLQVKAVVSPLKNPAWL 53


>tr|Q8LST5|Q8LST5_SORBI Mitochondrial aldehyde dehydrogenase
           OS=Sorghum bicolor GN=ALDH2a PE=2 SV=1
          Length = 551

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKGVY+L NYLQ KAVVTPI+DPAWL
Sbjct: 526 EKGVYALRNYLQTKAVVTPIKDPAWL 551


>tr|Q84V96|Q84V96_LOTCO Aldehyde dehydrogenase 1 OS=Lotus
           corniculatus GN=Aldh1 PE=2 SV=1
          Length = 542

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSL+NYLQVKAVVTP+++PAWL
Sbjct: 517 EKGIYSLHNYLQVKAVVTPLKNPAWL 542


>tr|A9NUF6|A9NUF6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 544

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSL NYLQVKAVVTP+++PAWL
Sbjct: 519 EKGIYSLQNYLQVKAVVTPLKNPAWL 544


>tr|A7Q2D8|A7Q2D8_VITVI Chromosome chr1 scaffold_46, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028844001
           PE=3 SV=1
          Length = 538

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/26 (76%), Positives = 25/26 (96%)
 Frame = +1

Query: 1   EKGVYSLNNYLQVKAVVTPIRDPAWL 78
           EKG+YSL NYLQVKAV+TP+++PAWL
Sbjct: 513 EKGIYSLQNYLQVKAVITPLKNPAWL 538