DK944370
Clone id YMU02A01NGRL0005_N13
Library
Length 180
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_N13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GAATCAAACATGACCTCTCATCAAATCGAAACTGTCCACATTACCAACTACATGCATTTC
TTGTAATTTTAGGACAAATTGTTCTTCTGATAAAATGACACTCAAGAAATTGCAAACTTT
TAAGTAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944370|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N13, 5'
(125 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9XWQ4
Definition tr|Q9XWQ4|Q9XWQ4_CAEEL Protein Y106G6A.2a, confirmed by transcript evidence OS=Caenorhabditis elegans
Align length 35
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944370|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N13, 5'
(125 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9XWQ4|Q9XWQ4_CAEEL Protein Y106G6A.2a, confirmed by transcri... 33 9.3

>tr|Q9XWQ4|Q9XWQ4_CAEEL Protein Y106G6A.2a, confirmed by transcript
evidence OS=Caenorhabditis elegans GN=Y106G6A.2 PE=2
SV=2
Length = 428

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2

Query: 17 LIKSKLSTLPTTCISCNFRTNCSSDKMTLKKLQTF 121
LI ++ S C +CN +TNC K TL+KL+ +
Sbjct: 72 LISAQFSERKMNCKNCNKKTNCCCKKCTLEKLKIY 106