DK944372
Clone id YMU02A01NGRL0005_N15
Library
Length 158
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_N15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGTACAGCTAGCTCACGCTCCAACCCAAGTAGCATGGGGCACGCAAAATCCCGTGTGA
ATCAGCGAGGACCACCTTGTAAGGCTAAATATTCCTGAGTGACCGATAGCGAAGCAGTAC
CGTGAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944372|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N15, 5'
(128 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6H5B5
Definition tr|A6H5B5|A6H5B5_VIGUN Putative ATP synthase CF0 subunit I (Fragment) OS=Vigna unguiculata
Align length 40
Score (bit) 66.2
E-value 8.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944372|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N15, 5'
(128 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6H5B5|A6H5B5_VIGUN Putative ATP synthase CF0 subunit I (Frag... 66 8e-10
tr|A6H5B3|A6H5B3_VIGUN Putative ribosomal protein S3 (Fragment) ... 66 8e-10
tr|A6H595|A6H595_VIGUN Putative 23S ribosomal RNA (Fragment) OS=... 66 8e-10
tr|A6H594|A6H594_VIGUN Putative 23S ribosomal RNA (Fragment) OS=... 66 8e-10
tr|A6H593|A6H593_VIGUN Putative 23S ribosomal RNA (Fragment) OS=... 66 8e-10
tr|A4QMC0|A4QMC0_PINKO ORF44l OS=Pinus koraiensis PE=4 SV=1 62 1e-08
tr|A7PTD9|A7PTD9_VITVI Chromosome chr8 scaffold_29, whole genome... 56 1e-06
tr|A6FJV5|A6FJV5_9RHOB Putative uncharacterized protein OS=Roseo... 51 3e-05
tr|Q3BKI1|Q3BKI1_9PROT Putative uncharacterized protein OS=Magne... 50 4e-05
tr|A2PD90|A2PD90_VIBCH Putative uncharacterized protein (Fragmen... 49 1e-04
tr|B3D9S8|B3D9S8_BURM1 Putative uncharacterized protein OS=Burkh... 49 2e-04
tr|Q8CM43|Q8CM43_VIBVU Putative uncharacterized protein OS=Vibri... 48 3e-04
tr|Q8CM40|Q8CM40_VIBVU Putative uncharacterized protein OS=Vibri... 48 3e-04
tr|B2PX01|B2PX01_PROST Putative uncharacterized protein OS=Provi... 47 4e-04
tr|B1N6J9|B1N6J9_9PROT Putative uncharacterized protein OS=uncul... 47 4e-04
tr|Q0JIM3|Q0JIM3_ORYSJ Photosystem I P700 chlorophyll A apoprote... 45 0.002
tr|A5ZI73|A5ZI73_9BACE Putative uncharacterized protein OS=Bacte... 43 0.007
tr|B5HI44|B5HI44_STRPR Putative uncharacterized protein OS=Strep... 43 0.009
tr|B5HGU7|B5HGU7_STRPR Putative uncharacterized protein OS=Strep... 43 0.009
tr|B5H7Z0|B5H7Z0_STRPR Putative uncharacterized protein (Fragmen... 43 0.009
tr|B4VCZ2|B4VCZ2_9ACTO Putative uncharacterized protein OS=Strep... 43 0.009
tr|B4V209|B4V209_9ACTO Putative uncharacterized protein (Fragmen... 43 0.009
tr|B5G7E5|B5G7E5_9ACTO Putative uncharacterized protein (Fragmen... 41 0.026
tr|Q1MP77|Q1MP77_LAWIP Putative uncharacterized protein LI1146 O... 41 0.034
tr|Q57T06|Q57T06_SALCH Putative uncharacterized protein OS=Salmo... 40 0.044
tr|Q57J74|Q57J74_SALCH Putative uncharacterized protein OS=Salmo... 40 0.044
tr|Q1R3T8|Q1R3T8_ECOUT Putative uncharacterized protein OS=Esche... 40 0.044
tr|B0NEX9|B0NEX9_EUBSP Putative uncharacterized protein OS=Clost... 39 0.17
tr|B0MI66|B0MI66_9FIRM Putative uncharacterized protein (Fragmen... 39 0.17
tr|A7B6K6|A7B6K6_RUMGN Putative uncharacterized protein OS=Rumin... 38 0.22

>tr|A6H5B5|A6H5B5_VIGUN Putative ATP synthase CF0 subunit I
(Fragment) OS=Vigna unguiculata GN=atpF PE=2 SV=1
Length = 52

Score = 66.2 bits (160), Expect = 8e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3

Query: 3 STASSRSNPSSMGHAKSRVNQRGPPCKAKYS*VTDSEAVP 122
S S RS+PSSMGH +SRVNQ+GPPCKAKYS VTDSE VP
Sbjct: 8 SITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 47


>tr|A6H5B3|A6H5B3_VIGUN Putative ribosomal protein S3 (Fragment)
OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
Length = 79

Score = 66.2 bits (160), Expect = 8e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3

Query: 3 STASSRSNPSSMGHAKSRVNQRGPPCKAKYS*VTDSEAVP 122
S S RS+PSSMGH +SRVNQ+GPPCKAKYS VTDSE VP
Sbjct: 37 SITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 76


>tr|A6H595|A6H595_VIGUN Putative 23S ribosomal RNA (Fragment)
OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
Length = 87

Score = 66.2 bits (160), Expect = 8e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3

Query: 3 STASSRSNPSSMGHAKSRVNQRGPPCKAKYS*VTDSEAVP 122
S S RS+PSSMGH +SRVNQ+GPPCKAKYS VTDSE VP
Sbjct: 43 SITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 82


>tr|A6H594|A6H594_VIGUN Putative 23S ribosomal RNA (Fragment)
OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
Length = 90

Score = 66.2 bits (160), Expect = 8e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3

Query: 3 STASSRSNPSSMGHAKSRVNQRGPPCKAKYS*VTDSEAVP 122
S S RS+PSSMGH +SRVNQ+GPPCKAKYS VTDSE VP
Sbjct: 46 SITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 85


>tr|A6H593|A6H593_VIGUN Putative 23S ribosomal RNA (Fragment)
OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
Length = 85

Score = 66.2 bits (160), Expect = 8e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3

Query: 3 STASSRSNPSSMGHAKSRVNQRGPPCKAKYS*VTDSEAVP 122
S S RS+PSSMGH +SRVNQ+GPPCKAKYS VTDSE VP
Sbjct: 41 SITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 80


>tr|A4QMC0|A4QMC0_PINKO ORF44l OS=Pinus koraiensis PE=4 SV=1
Length = 44

Score = 62.4 bits (150), Expect = 1e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -1

Query: 128 PSRYCFAIGHSGIFSLTRWSSLIHTGFCVPHATWVGA 18
PSRY FAIGH G+FSL RWS LIHTGF VPHAT V A
Sbjct: 8 PSRYYFAIGHPGVFSLARWSLLIHTGFHVPHATRVRA 44


>tr|A7PTD9|A7PTD9_VITVI Chromosome chr8 scaffold_29, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023317001
PE=4 SV=1
Length = 390

Score = 55.8 bits (133), Expect = 1e-06
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = -1

Query: 128 PSRYCFAIGHSGIFSLTRWSSLIHTGFCVPHAT 30
PSRY FAI H +FSL RWS LIHTGF VPHAT
Sbjct: 240 PSRYYFAISHPEVFSLARWSLLIHTGFHVPHAT 272


>tr|A6FJV5|A6FJV5_9RHOB Putative uncharacterized protein
OS=Roseobacter sp. AzwK-3b GN=RAZWK3B_00595 PE=4 SV=1
Length = 101

Score = 50.8 bits (120), Expect = 3e-05
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -2

Query: 127 PHGTASLSVTQEYLALQGGPR*FTRDFACPMLL 29
PHGT SLSV++EYLA +GGP F +DF CP LL
Sbjct: 32 PHGTGSLSVSKEYLAFEGGPPIFRQDFTCPALL 64


>tr|Q3BKI1|Q3BKI1_9PROT Putative uncharacterized protein
OS=Magnetospirillum gryphiswaldense GN=mgI387 PE=4 SV=1
Length = 259

Score = 50.4 bits (119), Expect = 4e-05
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -2

Query: 127 PHGTASLSVTQEYLALQGGPR*FTRDFACPMLL 29
PHGT+SLSVT+EYL L+ GP F +DF CP LL
Sbjct: 108 PHGTSSLSVTEEYLGLEDGPPMFRQDFTCPALL 140


>tr|A2PD90|A2PD90_VIBCH Putative uncharacterized protein (Fragment)
OS=Vibrio cholerae 1587 GN=A55_B0049 PE=4 SV=1
Length = 171

Score = 48.9 bits (115), Expect = 1e-04
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -2

Query: 127 PHGTASLSVTQEYLALQGGPR*FTRDFACPMLL 29
PHGT SLSV+QEYLAL+ GP F +D CP LL
Sbjct: 24 PHGTGSLSVSQEYLALEDGPPIFRQDITCPALL 56