BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944381|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N24, 5'
         (379 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99K24|S39A3_MOUSE Zinc transporter ZIP3 OS=Mus musculus GN=S...    32   1.3  
sp|Q5U1X7|S39A3_RAT Zinc transporter ZIP3 OS=Rattus norvegicus G...    31   1.7  
sp|Q9BRY0|S39A3_HUMAN Zinc transporter ZIP3 OS=Homo sapiens GN=S...    30   3.7  
sp|O13898|PMT1_SCHPO Dolichyl-phosphate-mannose--protein mannosy...    29   6.3  
sp|A4XKL5|Y1865_CALS8 Maf-like protein Csac_1865 OS=Caldicellulo...    29   6.3  
sp|Q110H3|RPOC2_TRIEI DNA-directed RNA polymerase subunit beta' ...    29   8.3  

>sp|Q99K24|S39A3_MOUSE Zinc transporter ZIP3 OS=Mus musculus
           GN=Slc39a3 PE=2 SV=1
          Length = 317

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 62  DKERSHLSVKSQQLLSSFGIHIGRWCCIEAV---ERSMLSFILRQGHESLSFRSAKTGST 232
           D E++H S K   L ++FG  +    C  A+    R  L  +L  GH S  +  A+T   
Sbjct: 33  DLEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTDYPLAETLMM 92

Query: 233 LPFFLEYYV 259
           + FFL  +V
Sbjct: 93  VGFFLTVFV 101


>sp|Q5U1X7|S39A3_RAT Zinc transporter ZIP3 OS=Rattus norvegicus
           GN=Slc39a3 PE=2 SV=1
          Length = 317

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 62  DKERSHLSVKSQQLLSSFGIHIGRWCCIEAV---ERSMLSFILRQGHESLSFRSAKTGST 232
           D E++H S K   L ++FG  +    C  A+    R  L  +L  GH S  +  A+T   
Sbjct: 33  DFEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTDYPLAETLMM 92

Query: 233 LPFFLEYYV 259
           + FFL  +V
Sbjct: 93  VGFFLTVFV 101


>sp|Q9BRY0|S39A3_HUMAN Zinc transporter ZIP3 OS=Homo sapiens
           GN=SLC39A3 PE=1 SV=2
          Length = 314

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 62  DKERSHLSVKSQQLLSSFGIHIGRWCCIEAV---ERSMLSFILRQGHESLSFRSAKTGST 232
           D E++H S K   L ++FG  +    C  A+    R  L  +L  GH S  +  A+T   
Sbjct: 33  DFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILL 92

Query: 233 LPFFLEYYV 259
           L FF+  ++
Sbjct: 93  LGFFMTVFL 101


>sp|O13898|PMT1_SCHPO Dolichyl-phosphate-mannose--protein
           mannosyltransferase 1 OS=Schizosaccharomyces pombe
           GN=ogm1 PE=1 SV=1
          Length = 893

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +2

Query: 137 CCIEAVERSMLSFILRQGHESLSFRSAKTGSTLPFFLEYYV 259
           CC   VERS   FI    H+ L   S K     P FLE +V
Sbjct: 483 CCRNCVERSTTWFIESNYHDGLPSDSRKITYRKPGFLESFV 523


>sp|A4XKL5|Y1865_CALS8 Maf-like protein Csac_1865
           OS=Caldicellulosiruptor saccharolyticus (strain ATCC
           43494 / DSM 8903) GN=Csac_1865 PE=3 SV=1
          Length = 199

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 3   CFYNVVGFPLYRFAVELDGL 62
           CFYNVVG PLY+    L  L
Sbjct: 171 CFYNVVGLPLYKLNTMLQKL 190


>sp|Q110H3|RPOC2_TRIEI DNA-directed RNA polymerase subunit beta'
           OS=Trichodesmium erythraeum (strain IMS101) GN=rpoC2
           PE=3 SV=1
          Length = 1415

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 134 ISQCECQKMRGVAVTSLRDGSFLYQPIK 51
           + + +C   RGV VTS++DG  +  P+K
Sbjct: 209 VREADCGTKRGVMVTSMKDGDRVLIPVK 236

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944381|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N24, 5'
         (379 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NV93|A9NV93_PICSI Putative uncharacterized protein OS=Picea...    41   0.034

>tr|A9NV93|A9NV93_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 222

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = +3

Query: 3   CFYNVVGFPLYRFAVELDGLIKKGA 77
           CF+NV+GFP++RFA E+D L+K  A
Sbjct: 195 CFFNVMGFPIHRFAAEIDQLVKSAA 219