DK944385 |
Clone id |
YMU02A01NGRL0005_O04 |
Library |
YMU02 |
Length |
485 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_O04. 5' end sequence. |
Accession |
DK944385 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL309Contig1 |
Sequence |
GAGAACCGGGCATTAGTAGATGCACCTGATATGGTTCGTGGTGCCATGAATTTCAAGCGG TTGTCTTTAACTGACATCAAGATTGATATACCAAGGATGCCAAAGAAAAAACAACTTACA GATGCTATTAATTCTGCAGATGTGCATGGCAAATGGGCTAACAGCTCTTGGGGGAGGAAA CTAATTGTGCAAAAGAAGCGTGCTTCATTGAATGATTTTGACCGATTTAAAGTCATGGTG GCAAGGATCAAGAGGAGCTCTATTGTCAAGCGAGAGCTGGCAAAATTGCGCAAGGGGAAA GCTTAGGCGGATTCCATGCAATTTTCAAGCGCGAGCTGGCAAAGCTACACAAAGTTAGCT TTATGTCATCTATGCAGGACAAACTTTGCTATTTGCCTTTGCAACGGGAGATGTTATGAA ATACGAGTGGAAATTTGTGATGGAAATTTTTGCTAAACAAGAATGAGTCTCCTTGAAGTT GGACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9T043 |
Definition |
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana |
Align length |
98 |
Score (bit) |
142.0 |
E-value |
6.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944385|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_O04, 5' (485 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis... 142 6e-34 sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum s... 141 2e-33 sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis... 140 3e-33 sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RP... 85 2e-16 sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=... 84 3e-16 sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens G... 84 4e-16 sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia ja... 82 1e-15 sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicu... 82 1e-15 sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus G... 82 1e-15 sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rube... 77 5e-14 sp|P38754|RL14B_YEAST 60S ribosomal protein L14-B OS=Saccharomyc... 65 1e-10 sp|P36105|RL14A_YEAST 60S ribosomal protein L14-A OS=Saccharomyc... 65 2e-10 sp|O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharo... 63 8e-10 sp|Q54Z09|RL14_DICDI 60S ribosomal protein L14 OS=Dictyostelium ... 54 3e-07 sp|P55841|RL14_DROME 60S ribosomal protein L14 OS=Drosophila mel... 54 5e-07 sp|Q95ZE8|RL14_DROVI 60S ribosomal protein L14 OS=Drosophila vir... 51 3e-06 sp|Q25278|RL14_LEIDO Probable 60S ribosomal protein L14 OS=Leish... 41 0.003 sp|P55843|RL14_TRYCO Probable 60S ribosomal protein L14 OS=Trypa... 38 0.021 sp|Q6BNG2|DPOE_DEBHA DNA polymerase epsilon catalytic subunit A ... 37 0.047 sp|A1VC99|DNLJ1_DESVV DNA ligase 1 OS=Desulfovibrio vulgaris sub... 30 4.4 sp|Q96RA2|OR7D2_HUMAN Olfactory receptor 7D2 OS=Homo sapiens GN=... 30 5.7 sp|Q5QGS0|K2022_HUMAN Uncharacterized protein KIAA2022 OS=Homo s... 29 9.8
>sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1 Length = 134
Score = 142 bits (359), Expect = 6e-34 Identities = 69/98 (70%), Positives = 84/98 (85%) Frame = +1
Query: 1 ENRALVDAPDMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWGRK 180 +NRALVDAPDM R MNFKRLSLTDI IDI R+PKKK L +A+ ADV KW SSWGRK Sbjct: 33 QNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRK 92
Query: 181 LIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 LIVQK+RA+LNDFDRFK+M+A+IK++ +V++ELAKL+K Sbjct: 93 LIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKK 130
>sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1 Length = 133
Score = 141 bits (355), Expect = 2e-33 Identities = 69/101 (68%), Positives = 85/101 (84%) Frame = +1
Query: 1 ENRALVDAPDMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWGRK 180 + RALVDAPDM R +NFKRLSLTD+KIDI R+PKKK L A+ +ADV KWA SSWGRK Sbjct: 33 QTRALVDAPDMERSPINFKRLSLTDLKIDIKRVPKKKDLIKALEAADVKNKWAKSSWGRK 92
Query: 181 LIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRKGKA 303 LIV+K RA+LNDFDRFK+M+A+IKR++ V++ELAKL+K A Sbjct: 93 LIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKLKKTAA 133
>sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1 Length = 134
Score = 140 bits (353), Expect = 3e-33 Identities = 69/98 (70%), Positives = 83/98 (84%) Frame = +1
Query: 1 ENRALVDAPDMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWGRK 180 +NRALVDAPDM R MN KRLSLTDI IDI R+PKKK L +A+ ADV KW SSWGRK Sbjct: 33 QNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRK 92
Query: 181 LIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 LIVQK+RA+LNDFDRFK+M+A+IKR+ IV++ELAKL++ Sbjct: 93 LIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKR 130
>sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1 Length = 213
Score = 84.7 bits (208), Expect = 2e-16 Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 2/100 (2%) Frame = +1
Query: 1 ENRALVDAP--DMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWG 174 +NRALVD P + R AM FK + LTD + P ++K + A AD++ KWA + W Sbjct: 33 QNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINAKWAATRWA 92
Query: 175 RKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 +K+ ++K+A + DFDR+KVM AR R+ ++K E+ KL+K Sbjct: 93 KKIEAREKKAKMTDFDRYKVMKARKMRNRLIKLEVKKLQK 132
>sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3 Length = 214
Score = 84.3 bits (207), Expect = 3e-16 Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 2/100 (2%) Frame = +1
Query: 1 ENRALVDAP--DMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWG 174 +NRALVD P + R AM FK + LTD + P ++K + A AD++ KWA + W Sbjct: 33 QNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINAKWAATRWA 92
Query: 175 RKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 +K+ ++K+A + DFDR+KVM AR R+ ++K E+ KL+K Sbjct: 93 KKIEAREKKAKMTDFDRYKVMKARKMRNRLIKIEVKKLQK 132
>sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 Length = 215
Score = 83.6 bits (205), Expect = 4e-16 Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 2/100 (2%) Frame = +1
Query: 1 ENRALVDAP--DMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWG 174 +NRALVD P + R AM FK + LTD + P +K + A AD++ KWA + W Sbjct: 33 QNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSAHQKYVRQAWQKADINTKWAATRWA 92
Query: 175 RKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 +K+ ++++A + DFDRFKVM A+ R+ I+K E+ KL+K Sbjct: 93 KKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQK 132
>sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1 Length = 133
Score = 82.4 bits (202), Expect = 1e-15 Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 3/100 (3%) Frame = +1
Query: 1 ENRALVDAPD--MVRGAMNFKRLSLTDIKID-IPRMPKKKQLTDAINSADVHGKWANSSW 171 +NR LVD+P + R +N KR++LT IK+D I R ++ +A V +A S W Sbjct: 33 QNRILVDSPSHGLKRKVINVKRIALTSIKVDDIARGAPVAEVKSKYTAAKVDETFAASGW 92
Query: 172 GRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLR 291 G+KL ++KRA+L+DF RFKVMVAR+K+S + ELAKL+ Sbjct: 93 GKKLAKREKRAALDDFGRFKVMVARMKKSKAINAELAKLK 132
>sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3 Length = 214
Score = 82.0 bits (201), Expect = 1e-15 Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 2/100 (2%) Frame = +1
Query: 1 ENRALVDAP--DMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWG 174 +NRALVD P + R AM FK + LTD + P ++K + A AD++ KWA + W Sbjct: 33 QNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWA 92
Query: 175 RKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 +K+ ++++A + DFDRFKVM A+ R+ I+K E+ KL++ Sbjct: 93 KKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132
>sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3 Length = 217
Score = 82.0 bits (201), Expect = 1e-15 Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 2/100 (2%) Frame = +1
Query: 1 ENRALVDAP--DMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWG 174 +NRALVD P + R AM FK + LTD + P ++K + A AD++ KWA + W Sbjct: 33 QNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWA 92
Query: 175 RKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 +K+ ++++A + DFDRFKVM A+ R+ I+K E+ KL++ Sbjct: 93 KKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132
>sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1 Length = 152
Score = 76.6 bits (187), Expect = 5e-14 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%) Frame = +1
Query: 1 ENRALVDAP--DMVRGAMNFKRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKWANSSWG 174 +NRALVD P + R +MNFK L LT++K P K + A ++ KW S Sbjct: 33 QNRALVDGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAWEKDEISKKWEESHLA 92
Query: 175 RKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 294 +K+ ++KR +L DF+RFK+M A+ R+ ++K E KLRK Sbjct: 93 KKIAAKEKRKTLTDFERFKLMKAKQARNRLIKIEFGKLRK 132
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NXE0 |
Definition |
tr|A7NXE0|A7NXE0_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
101 |
Score (bit) |
153.0 |
E-value |
5.0e-36 |
Report |
|