DK944397 [AcEST]

DK944397
Clone id	YMU02A01NGRL0005_O19
Library	YMU02
Length	534
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_O19. 5' end sequence.
Accession	DK944397
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL450Contig1
Sequence	GAAGAGCGACGAGGAGAGAGGTTCAAGCAGCTAAAGGCAGAGAAAGCGCAAAGAAAGGCG GAGCAAGCTATAGCTGTCAAACCAACCGATAATTCAGTCAATTTGACAACTGCTGCTACA TCTGAATCTGACGTAGAGAATGATGGGGTCGAGTCTGATAACATTGCTTCTGCGAAGGAC TCTTTGGAGGAGATTTATAGCAAAAGTGAGGCTGCTGCAACTTCCGCTGCCTCAAAACGA AGTAAGCGCTCCAAGAGAAGGCGCTCAGCATAGACATCGAGAGCTATTTTGAAGGATCTT TCCATGCAGTGGTTATCATGTACGAAGGTGGGTGACTTCACATTATGCTAGGATTATATG TGCGGAGTTCATTGAGTTTTTGAGGGCTGCAGGATTTGTAAACAGCATTTTTGCTGCTTG TAAGCGCACTTGCAAGCAAGCTATGCTTTGTATATTGTTACATAGTGCTCAACGCATGCC CTTAATGGAAGTTTTGTGTAATAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9Y1T5
Definition	sp\|Q9Y1T5\|SUH_DROSI Protein suppressor of hairless (Fragment) OS=Drosophila simulans
Align length	41
Score (bit)	30.0
E-value	6.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944397\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_O19, 5' (504 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9Y1T5\|SUH_DROSI Protein suppressor of hairless (Fragment) OS... 30 6.4 sp\|P28159\|SUH_DROME Suppressor of hairless protein OS=Drosophila... 30 6.4 >sp\|Q9Y1T5\|SUH_DROSI Protein suppressor of hairless (Fragment) OS=Drosophila simulans GN=Su(H) PE=3 SV=1 Length = 102 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 232 RQRKLQQPHFCYKSPPKSPSQKQCYQTRPHHSLRQIQMQQ 110 +Q+ PHF P SQ+Q Q + HH +Q Q QQ Sbjct: 15 QQQSQDMPHFGLPGPQPPSSQQQQQQMQVHHQQQQQQQQQQ 55 >sp\|P28159\|SUH_DROME Suppressor of hairless protein OS=Drosophila melanogaster GN=Su(H) PE=1 SV=1 Length = 594 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 232 RQRKLQQPHFCYKSPPKSPSQKQCYQTRPHHSLRQIQMQQ 110 +Q+ PHF P SQ+Q Q + HH +Q Q QQ Sbjct: 38 QQQSQDMPHFGLPGPQPPSSQQQQQQLQVHHQQQQQQQQQQ 78
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944397\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_O19, 5' (504 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****