DK944400 |
Clone id |
YMU02A01NGRL0005_O24 |
Library |
YMU02 |
Length |
349 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_O24. 5' end sequence. |
Accession |
DK944400 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL138Contig1 |
Sequence |
GTGATGCTGAAGTGCGTGAGCTTGTGGAACGTGCTTATTCTAGGGCAAAGAACATAATTA CAAAGCATATTGACATACTTCACAAGTTGGCAAATCTGCTAATAGAGAAAGAGACTGTGG ATGGTGAGGAATTTATAAGCCTCTTCATGGACAACAAAGCTGAGCTTTATTTAGCTTGAT TATGATCACACTGAGATTGTTGTGTTGTTAGCTTGGCTGGGAAGCCAAGGTTTGTATGCA TCTTTGTATCAATGTATAGTAAGTCCAATAGGAAACGTCGCCATTTCAAACATCATTTTA ATCTGAAATCTGGGATGGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O82150 |
Definition |
sp|O82150|FTSH_TOBAC Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum |
Align length |
58 |
Score (bit) |
96.7 |
E-value |
3.0e-20 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944400|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_O24, 5' (320 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O82150|FTSH_TOBAC Cell division protease ftsH homolog, chloro... 97 3e-20 sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1, chl... 94 2e-19 sp|Q5Z974|FTSH1_ORYSJ Cell division protease ftsH homolog 1, chl... 94 3e-19 sp|Q9FH02|FTSH5_ARATH Cell division protease ftsH homolog 5, chl... 92 8e-19 sp|Q9BAE0|FTSH_MEDSA Cell division protease ftsH homolog, chloro... 90 3e-18 sp|Q39444|FTSH_CAPAN Cell division protease ftsH homolog, chloro... 61 1e-09 sp|P72991|FTSH4_SYNY3 Cell division protease ftsH homolog 4 OS=S... 58 2e-08 sp|Q68XR9|FTSH_RICTY Cell division protease ftsH homolog OS=Rick... 55 1e-07 sp|Q4UN68|FTSH_RICFE Cell division protease ftsH homolog OS=Rick... 55 1e-07 sp|Q9ZEA2|FTSH_RICPR Cell division protease ftsH homolog OS=Rick... 54 2e-07 sp|Q92JJ9|FTSH_RICCN Cell division protease ftsH homolog OS=Rick... 54 2e-07 sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1 OS=S... 50 3e-06 sp|Q1RGP0|FTSH_RICBR Cell division protease ftsH homolog OS=Rick... 49 6e-06 sp|Q1XDF9|FSTH_PORYE Cell division protease ftsH homolog OS=Porp... 48 2e-05 sp|O80983|FTSH4_ARATH Cell division protease ftsH homolog 4, mit... 47 2e-05 sp|P63343|FTSH_SALTY Cell division protease ftsH OS=Salmonella t... 46 5e-05 sp|P63344|FTSH_SALTI Cell division protease ftsH OS=Salmonella t... 46 5e-05 sp|P51327|FTSH_PORPU Cell division protease ftsH homolog OS=Porp... 46 5e-05 sp|P0C5C0|FTSH_MYCTU Cell division protease ftsH homolog OS=Myco... 46 5e-05 sp|A5U8T5|FTSH_MYCTA Cell division protease ftsH homolog OS=Myco... 46 5e-05 sp|P0A4V9|FTSH_MYCBO Cell division protease ftsH homolog OS=Myco... 46 5e-05 sp|P57462|FTSH_BUCAI Cell division protease ftsH OS=Buchnera aph... 46 7e-05 sp|Q8LQJ8|FTSH5_ORYSJ Cell division protease ftsH homolog 5, mit... 46 7e-05 sp|P0AAI4|FTSH_SHIFL Cell division protease ftsH OS=Shigella fle... 45 9e-05 sp|P0AAI3|FTSH_ECOLI Cell division protease ftsH OS=Escherichia ... 45 9e-05 sp|Q8X9L0|FTSH_ECO57 Cell division protease ftsH OS=Escherichia ... 45 9e-05 sp|A2ZVG7|FTSH9_ORYSJ Cell division protease ftsH homolog 9, chl... 45 9e-05 sp|Q89AF2|FTSH_BUCBP Cell division protease ftsH OS=Buchnera aph... 44 2e-04 sp|P45219|FTSH2_HAEIN Cell division protease ftsH homolog 2 OS=H... 44 3e-04 sp|P71377|FTSH1_HAEIN Cell division protease ftsH homolog 1 OS=H... 44 3e-04
>sp|O82150|FTSH_TOBAC Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2 Length = 714
Score = 96.7 bits (239), Expect = 3e-20 Identities = 48/58 (82%), Positives = 52/58 (89%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVERAY RA IIT HIDILHKLA LLIEKETVDGEEF+SLF+D KAELY++ Sbjct: 650 DAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYIS 707
>sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2 Length = 716
Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/58 (79%), Positives = 52/58 (89%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AY RA IIT HIDILHKLA LLIEKETVDGEEF+SLF+D +AELY++ Sbjct: 659 DAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS 716
>sp|Q5Z974|FTSH1_ORYSJ Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1 Length = 686
Score = 93.6 bits (231), Expect = 3e-19 Identities = 46/58 (79%), Positives = 53/58 (91%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AYSRA IIT HIDILHKLA LL+EKETVDGEEF+SLF+D +AEL++A Sbjct: 629 DAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAELFVA 686
>sp|Q9FH02|FTSH5_ARATH Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1 Length = 704
Score = 92.0 bits (227), Expect = 8e-19 Identities = 46/58 (79%), Positives = 52/58 (89%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AY RAK IIT IDILHKLA LLIEKETVDGEEF+SLF+D +AELY++ Sbjct: 647 DAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS 704
>sp|Q9BAE0|FTSH_MEDSA Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1 Length = 706
Score = 90.1 bits (222), Expect = 3e-18 Identities = 44/58 (75%), Positives = 50/58 (86%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 D EVRELV++AY RA II HIDILHKLA LLIEKETVDGEEF+SLF+D KAELY++ Sbjct: 649 DKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS 706
>sp|Q39444|FTSH_CAPAN Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1 Length = 662
Score = 61.2 bits (147), Expect = 1e-09 Identities = 30/36 (83%), Positives = 32/36 (88%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEK 110 D+EVRELVE+AY RAK IIT HIDILHKLA LLIEK Sbjct: 627 DSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662
>sp|P72991|FTSH4_SYNY3 Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1 Length = 616
Score = 57.8 bits (138), Expect = 2e-08 Identities = 28/57 (49%), Positives = 41/57 (71%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYL 173 D EV +LV++AY RAK ++ ++ IL +LA +L+EKETVD EE +L +N A+L L Sbjct: 558 DEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNAKLAL 614
>sp|Q68XR9|FTSH_RICTY Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1 Length = 637
Score = 54.7 bits (130), Expect = 1e-07 Identities = 25/47 (53%), Positives = 36/47 (76%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISL 143 DAEV++++ + Y AK+I+TKHID LH LAN LIE ET+ G++ +L Sbjct: 546 DAEVKKIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL 592
>sp|Q4UN68|FTSH_RICFE Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1 Length = 635
Score = 54.7 bits (130), Expect = 1e-07 Identities = 25/47 (53%), Positives = 36/47 (76%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISL 143 DAEV++++ + Y AK+I+TKHID LH LAN LIE ET+ G++ +L Sbjct: 546 DAEVKKIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL 592
>sp|Q9ZEA2|FTSH_RICPR Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1 Length = 637
Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/47 (53%), Positives = 35/47 (74%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISL 143 DAEV+ ++ + Y AK+I+TKHID LH LAN LIE ET+ G++ +L Sbjct: 546 DAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL 592
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NVT2 |
Definition |
tr|A7NVT2|A7NVT2_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
58 |
Score (bit) |
97.4 |
E-value |
3.0e-19 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944400|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_O24, 5' (320 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NVT2|A7NVT2_VITVI Chromosome chr18 scaffold_1, whole genome... 97 3e-19 tr|A5B2F0|A5B2F0_VITVI Putative uncharacterized protein OS=Vitis... 97 3e-19 tr|A1KXM7|A1KXM7_SOLLC FtsH-like protein OS=Solanum lycopersicum... 96 1e-18 tr|B8B2K6|B8B2K6_ORYSI Putative uncharacterized protein OS=Oryza... 94 4e-18 tr|B7EAD1|B7EAD1_ORYSJ cDNA clone:J013001F19, full insert sequen... 94 4e-18 tr|A9RHM7|A9RHM7_PHYPA Predicted protein OS=Physcomitrella paten... 89 1e-16 tr|A8IL08|A8IL08_CHLRE Membrane AAA-metalloprotease OS=Chlamydom... 70 7e-11 tr|A4S2T2|A4S2T2_OSTLU Predicted protein OS=Ostreococcus lucimar... 61 3e-08 tr|B0S222|B0S222_FINM2 ATP-dependent zinc metallopeptidase OS=Fi... 60 4e-08 tr|Q011I3|Q011I3_OSTTA FTSH_MEDSA Cell division protein ftsH hom... 60 5e-08 tr|A0YIQ2|A0YIQ2_9CYAN Cell division protein OS=Lyngbya sp. PCC ... 59 1e-07 tr|B7XZF7|B7XZF7_RUMHA Putative uncharacterized protein OS=Blaut... 58 3e-07 tr|B1XKT8|B1XKT8_SYNP2 ATP-dependent metalloprotease FtsH subfam... 57 5e-07 tr|B0NEV6|B0NEV6_EUBSP Putative uncharacterized protein OS=Clost... 57 6e-07 tr|Q5NLX7|Q5NLX7_ZYMMO ATP-dependent Zn proteases OS=Zymomonas m... 56 8e-07 tr|A0L4S0|A0L4S0_MAGSM Membrane protease FtsH catalytic subunit ... 56 8e-07 tr|B7K358|B7K358_SYNP8 ATP-dependent metalloprotease FtsH OS=Syn... 56 8e-07 tr|B4BXM8|B4BXM8_9CHRO ATP-dependent metalloprotease FtsH OS=Cya... 56 8e-07 tr|Q0BT44|Q0BT44_GRABC Cell division protein ftsH OS=Granulibact... 56 1e-06 tr|A0ZMP5|A0ZMP5_NODSP Peptidase M41, FtsH OS=Nodularia spumigen... 56 1e-06 tr|B4WKU0|B4WKU0_9SYNE ATP-dependent metallopeptidase HflB subfa... 55 1e-06 tr|B4VTY4|B4VTY4_9CYAN ATP-dependent metallopeptidase HflB subfa... 55 1e-06 tr|A3INX9|A3INX9_9CHRO Cell division protein; FtsH OS=Cyanothece... 55 1e-06 tr|A4J0S3|A4J0S3_DESRM ATP-dependent metalloprotease FtsH OS=Des... 55 2e-06 tr|A8YFL0|A8YFL0_MICAE Similar to sp|P72991|FTSH4_SYNY3 Cell div... 55 2e-06 tr|A6BI46|A6BI46_9FIRM Putative uncharacterized protein OS=Dorea... 55 2e-06 tr|Q3AFJ8|Q3AFJ8_CARHZ Cell division protein FtsH OS=Carboxydoth... 55 2e-06 tr|B7P699|B7P699_IXOSC ATPase, putative (Fragment) OS=Ixodes sca... 55 2e-06 tr|Q8R7L1|Q8R7L1_THETN ATP-dependent Zn proteases OS=Thermoanaer... 54 3e-06 tr|Q5N2R5|Q5N2R5_SYNP6 ATP-dependent Zn protease OS=Synechococcu... 54 3e-06
>tr|A7NVT2|A7NVT2_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015560001 PE=4 SV=1 Length = 706
Score = 97.4 bits (241), Expect = 3e-19 Identities = 48/58 (82%), Positives = 54/58 (93%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AYSRAK I+T HIDILHKLA LLIEKETVDGEEF+SLF+D KAEL++A Sbjct: 649 DAEVRELVEKAYSRAKQIMTTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 706
>tr|A5B2F0|A5B2F0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000978 PE=4 SV=1 Length = 663
Score = 97.4 bits (241), Expect = 3e-19 Identities = 48/58 (82%), Positives = 54/58 (93%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AYSRAK I+T HIDILHKLA LLIEKETVDGEEF+SLF+D KAEL++A Sbjct: 606 DAEVRELVEKAYSRAKQIMTTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 663
>tr|A1KXM7|A1KXM7_SOLLC FtsH-like protein OS=Solanum lycopersicum PE=2 SV=1 Length = 708
Score = 95.5 bits (236), Expect = 1e-18 Identities = 47/58 (81%), Positives = 52/58 (89%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AY RA IIT HIDILHKLA LLIEKETVDGEEF+SLF+D KAELY++ Sbjct: 651 DAEVRELVEKAYERATQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYIS 708
>tr|B8B2K6|B8B2K6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24516 PE=4 SV=1 Length = 630
Score = 93.6 bits (231), Expect = 4e-18 Identities = 46/58 (79%), Positives = 53/58 (91%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AYSRA IIT HIDILHKLA LL+EKETVDGEEF+SLF+D +AEL++A Sbjct: 573 DAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAELFVA 630
>tr|B7EAD1|B7EAD1_ORYSJ cDNA clone:J013001F19, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 686
Score = 93.6 bits (231), Expect = 4e-18 Identities = 46/58 (79%), Positives = 53/58 (91%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYLA 176 DAEVRELVE+AYSRA IIT HIDILHKLA LL+EKETVDGEEF+SLF+D +AEL++A Sbjct: 629 DAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAELFVA 686
>tr|A9RHM7|A9RHM7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_202568 PE=4 SV=1 Length = 647
Score = 89.0 bits (219), Expect = 1e-16 Identities = 43/57 (75%), Positives = 51/57 (89%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYL 173 DAEVRELVE AY+RAK I+ HIDILHKLA LL+EKETVDGEEF++LF+D +AELY+ Sbjct: 590 DAEVRELVETAYTRAKTIMETHIDILHKLAALLLEKETVDGEEFLNLFIDGQAELYV 646
>tr|A8IL08|A8IL08_CHLRE Membrane AAA-metalloprotease OS=Chlamydomonas reinhardtii GN=FTSH1 PE=4 SV=1 Length = 727
Score = 69.7 bits (169), Expect = 7e-11 Identities = 31/56 (55%), Positives = 47/56 (83%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELY 170 D+EV+ELVERAY RAK+++ ++IDILHK+A +LIEKE +DG+EF + + ++A+ Y Sbjct: 657 DSEVKELVERAYRRAKDLVEQNIDILHKVAAVLIEKENIDGDEFQQIVLASQAQQY 712
>tr|A4S2T2|A4S2T2_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_35099 PE=4 SV=1 Length = 651
Score = 60.8 bits (146), Expect = 3e-08 Identities = 27/57 (47%), Positives = 43/57 (75%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYL 173 D EV+ LV AY RAK+++ ++D+LH +A++L+EKE +DG+EF + + K+ELYL Sbjct: 582 DEEVKILVTAAYRRAKDLVQLNMDVLHAVADVLMEKENIDGDEFERIMLGAKSELYL 638
>tr|B0S222|B0S222_FINM2 ATP-dependent zinc metallopeptidase OS=Finegoldia magna (strain ATCC 29328) GN=FMG_0994 PE=4 SV=1 Length = 631
Score = 60.5 bits (145), Expect = 4e-08 Identities = 26/48 (54%), Positives = 40/48 (83%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLF 146 D+E+REL++ AY++A NI+ ++ID+LH LAN L+EKET+ EEF ++F Sbjct: 555 DSEMRELIDEAYNKALNILNENIDLLHALANKLLEKETIGQEEFEAIF 602
>tr|Q011I3|Q011I3_OSTTA FTSH_MEDSA Cell division protein ftsH homolog, chloroplast (ISS) OS=Ostreococcus tauri GN=Ot09g02880 PE=4 SV=1 Length = 662
Score = 60.1 bits (144), Expect = 5e-08 Identities = 27/57 (47%), Positives = 42/57 (73%) Frame = +3
Query: 3 DAEVRELVERAYSRAKNIITKHIDILHKLANLLIEKETVDGEEFISLFMDNKAELYL 173 D EV+ LV AY RAK+++ ++I +LH +A +L+EKE +DG+EF + + K+ELYL Sbjct: 542 DEEVKILVTAAYRRAKDLVQENIAVLHAVAEVLMEKENIDGDEFEQIMLKAKSELYL 598
|