BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944418|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_A02, 5'
         (116 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4QXJ7|POLS_EEEVF Structural polyprotein OS=Eastern equine en...    30   4.9  
sp|P08768|POLS_EEEV Structural polyprotein OS=Eastern equine enc...    30   4.9  
sp|P27284|POLS_EEEV3 Structural polyprotein OS=Eastern equine en...    29   6.5  

>sp|Q4QXJ7|POLS_EEEVF Structural polyprotein OS=Eastern equine
           encephalitis virus (strain Florida 91-469) PE=3 SV=1
          Length = 1242

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 116 SLIDNPKYKPVHIEIHKTNLQILP 45
           +L++ P Y PVH++I   N +I+P
Sbjct: 818 ALVERPGYAPVHLQIQLVNTRIIP 841


>sp|P08768|POLS_EEEV Structural polyprotein OS=Eastern equine
           encephalitis virus PE=2 SV=1
          Length = 1239

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 116 SLIDNPKYKPVHIEIHKTNLQILP 45
           +L++ P Y PVH++I   N +I+P
Sbjct: 815 ALVERPGYAPVHLQIQLVNTRIIP 838


>sp|P27284|POLS_EEEV3 Structural polyprotein OS=Eastern equine
           encephalitis virus (strain va33[ten broeck]) PE=3 SV=1
          Length = 1240

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 116 SLIDNPKYKPVHIEIHKTNLQILP 45
           +L++ P Y PVH++I   N  I+P
Sbjct: 816 ALVERPGYAPVHLQIQLVNTSIIP 839

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944418|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_A02, 5'
         (116 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******