BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944428|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_A14, 5'
         (216 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2VEI5|RPOC1_SOLTU DNA-directed RNA polymerase subunit beta' ...    30   4.8  
sp|Q5C6R9|SJ381_SCHJA UPF0506 protein SJCHGC02381 OS=Schistosoma...    30   4.9  
sp|Q5BX25|SJ965_SCHJA UPF0506 protein SJCHGC02965 (Fragment) OS=...    29   8.3  

>sp|Q2VEI5|RPOC1_SOLTU DNA-directed RNA polymerase subunit beta'
           OS=Solanum tuberosum GN=rpoC1 PE=3 SV=2
          Length = 687

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 25  GLSWCDLESHPN*SVSEASMLRPKVL*IRG 114
           GL +CD+ES+PN S +     +P  L +RG
Sbjct: 139 GLVYCDIESYPNFSFARPITKKPTFLRLRG 168


>sp|Q5C6R9|SJ381_SCHJA UPF0506 protein SJCHGC02381 OS=Schistosoma
           japonicum GN=SJCHGC02381 PE=2 SV=3
          Length = 150

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 38  VI*NPTRIEVYQRPQC*GQKFCRSEG 115
           +I N T+IE    PQ   QK+CR+EG
Sbjct: 61  IIENETKIEALNLPQIPKQKYCRTEG 86


>sp|Q5BX25|SJ965_SCHJA UPF0506 protein SJCHGC02965 (Fragment)
           OS=Schistosoma japonicum GN=SJCHGC02965 PE=2 SV=2
          Length = 161

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 38  VI*NPTRIEVYQRPQC*GQKFCRSEG 115
           +I N T+IE    PQ   QK+C+SEG
Sbjct: 72  IIENETKIEALNLPQNPKQKYCKSEG 97

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944428|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_A14, 5'
         (216 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******