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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944448
Clone id YMU02A01NGRL0006_B14
Library
Length 500
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_B14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCTGCCCTCCTAGCAAGTTTCCTTGGACTTACTCTGATAAAGAGACGTGTTACCTTCTTA
AAGGTAAGGTGAAAGTGTATGGGGAAGGCTCATCCGAGTATGTGGAGATCGGTGCAGGTG
ATTTGGTTGTGTTTCCGAAGGGTATGAGCCGTGCATGGGAGGTGTCTGAAACTGTTGATA
AACACTATAATTTCTCTTAGGGCAGGTTACATCCTACGCAGCTCTTGTTGTCCGATTTAG
GTCGTCATACCAATCTTTACAGATGCAATGCTATATCCCTATTCATGTCGCATTGTATTG
TGGTACATGTATAATATAAATCAGGTTGCCATTGAGAATTTTCTGTCGCATGATTAAGGT
CGTCATACTAATCTTTACACACGCAAAGCTATATATACCCCTCTTTGTGTCGCATTGTAT
TGAGGTATCTGACAATTTGTACTATATGAAAAAGGTTGCCATTGTAAATCCGAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P41729
Definition sp|P41729|Y098_GVCL Uncharacterized 41.0 kDa protein in P143-LEF5 intergenic region OS=Cryptophlebia leucotreta granulosis virus
Align length 50
Score (bit) 28.1
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944448|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_B14, 5'
         (472 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41729|Y098_GVCL Uncharacterized 41.0 kDa protein in P143-LEF...    28   1.7  
sp|Q9V576|WUN_DROME Putative phosphatidate phosphatase OS=Drosop...    32   1.9  
sp|A8IMK0|SYL_AZOC5 Leucyl-tRNA synthetase OS=Azorhizobium cauli...    30   4.1  
sp|Q61329|ZFHX3_MOUSE Zinc finger homeobox protein 3 OS=Mus musc...    30   5.3  
sp|Q9V8P9|TOPRS_DROME E3 ubiquitin-protein ligase Topors OS=Dros...    30   5.4  
sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 ...    30   7.1  
sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ...    29   9.3  

>sp|P41729|Y098_GVCL Uncharacterized 41.0 kDa protein in P143-LEF5
           intergenic region OS=Cryptophlebia leucotreta granulosis
           virus PE=4 SV=1
          Length = 343

 Score = 28.1 bits (61), Expect(2) = 1.7
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +1

Query: 259 TDAMLYPYSCRIVLWYMYNINQVAIENFLSHD*GRHTNLYTRKAIYTPLC 408
           TD    P S R+VLWY+ N N V  +     D     N+Y    +    C
Sbjct: 266 TDVKNIPKSPRVVLWYLINHNIVLFKTLTLVDDLFDNNIYYDNFVNLSTC 315



 Score = 21.9 bits (45), Expect(2) = 1.7
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 24  WTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDKHYN 191
           W+Y DKE       KVK+ G     Y +I     ++     +  ++++E  D++YN
Sbjct: 208 WSYGDKEHVVNSLNKVKLDG-----YFKI-----ILSGGRKAGEYQLNEEEDRYYN 253


>sp|Q9V576|WUN_DROME Putative phosphatidate phosphatase
           OS=Drosophila melanogaster GN=wun PE=1 SV=2
          Length = 379

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 450 FI*YKLSDTSIQCDTKRGIYSFACVKISMTTLIMRQKI 337
           F+ Y+L D  I+C  K GIY+F  V   +TT I +  I
Sbjct: 177 FMNYELPDWMIECYKKIGIYAFGAVLSQLTTDIAKYSI 214


>sp|A8IMK0|SYL_AZOC5 Leucyl-tRNA synthetase OS=Azorhizobium
           caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
           GN=leuS PE=3 SV=1
          Length = 874

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 27  TYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRA 155
           TY DK+  +L   +VK+ G+G +E ++ G+   V  P+ MS++
Sbjct: 589 TYKDKDGRWLFPEEVKLLGDGKAEKLDDGSPVTVGPPEKMSKS 631


>sp|Q61329|ZFHX3_MOUSE Zinc finger homeobox protein 3 OS=Mus musculus
            GN=Zfhx3 PE=1 SV=1
          Length = 3726

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 138  KGMSRAWEVSETVDKHYNFS*GRLHPTQLLLSDLGRHTNLYRCNAISL 281
            KG ++ ++ S T+  H+N     +H  +  L    RH   YRCN  SL
Sbjct: 1375 KGCNQVFKTSATLQTHFN----EVHAKRPQLPVSDRHVYKYRCNQCSL 1418


>sp|Q9V8P9|TOPRS_DROME E3 ubiquitin-protein ligase Topors
            OS=Drosophila melanogaster GN=Topors PE=1 SV=1
          Length = 1038

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 20/75 (26%), Positives = 36/75 (48%)
 Frame = -1

Query: 256  RLV*RPKSDNKSCVGCNLP*EKL*CLSTVSDTSHARLIPFGNTTKSPAPISTYSDEPSPY 77
            R+   P+ DN+   GC+ P  +  C  +   +  A L      T S AP+S+++   + +
Sbjct: 818  RMTPSPREDNEP--GCSAPKRRRSCSHSNQSSQSASLASSSTATSSSAPLSSFAWGAAGF 875

Query: 76   TFTLPLRR*HVSLSE 32
            +   PL R H ++ E
Sbjct: 876  SGD-PLMRGHPAMEE 889


>sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5
           OS=Homo sapiens GN=CREB5 PE=1 SV=2
          Length = 508

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -2

Query: 213 DVTCPKRNYSVYQQFQTPPMHGSYPSETQ--PNHLHRSPHTRMSLPH 79
           D T     +S   Q QT P H  YP + Q   +H H  PH + + PH
Sbjct: 267 DQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPH 313


>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
           OS=Mus musculus GN=Creb5 PE=2 SV=3
          Length = 357

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -2

Query: 174 QFQTPPMHGSYPSETQ--PNHLHRSPHTRMSLPH 79
           Q QT P H  YP + Q   +H H  PH + + PH
Sbjct: 129 QHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPH 162
tr_hit_id A9TEC3
Definition tr|A9TEC3|A9TEC3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 64
Score (bit) 117.0
E-value 4.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944448|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_B14, 5'
         (472 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TEC3|A9TEC3_PHYPA Predicted protein OS=Physcomitrella paten...   117   4e-25
tr|A9NYM4|A9NYM4_PICSI Putative uncharacterized protein OS=Picea...   111   2e-23
tr|A9NK05|A9NK05_PICSI Putative uncharacterized protein OS=Picea...   111   2e-23
tr|B4F9Z6|B4F9Z6_MAIZE Enzyme of the cupin superfamily OS=Zea ma...   109   8e-23
tr|Q9SV91|Q9SV91_ARATH Putative uncharacterized protein AT4g1030...   108   1e-22
tr|Q8LEK1|Q8LEK1_ARATH Putative uncharacterized protein OS=Arabi...   108   1e-22
tr|A9PG71|A9PG71_POPTR Putative uncharacterized protein OS=Popul...   108   2e-22
tr|B6TP17|B6TP17_MAIZE Enzyme of the cupin superfamily OS=Zea ma...   105   9e-22
tr|A7Q7Q9|A7Q7Q9_VITVI Chromosome chr18 scaffold_61, whole genom...   105   9e-22
tr|Q01J39|Q01J39_ORYSA OSIGBa0140O07.4 protein OS=Oryza sativa G...   103   3e-21
tr|B8AUC7|B8AUC7_ORYSI Putative uncharacterized protein OS=Oryza...   103   3e-21
tr|Q7XUW6|Q7XUW6_ORYSJ OSJNBa0027P08.10 protein (Putative unchar...   102   1e-20
tr|Q0JCX3|Q0JCX3_ORYSJ Os04g0445200 protein OS=Oryza sativa subs...   102   1e-20
tr|A7Q7Q8|A7Q7Q8_VITVI Chromosome chr18 scaffold_61, whole genom...    92   1e-17
tr|Q9M8Y6|Q9M8Y6_ARATH T6K12.8 protein (Putative uncharacterized...    92   2e-17
tr|B6T5M3|B6T5M3_MAIZE Enzyme of the cupin superfamily OS=Zea ma...    92   2e-17
tr|A9P212|A9P212_PICSI Putative uncharacterized protein OS=Picea...    91   3e-17
tr|B8LMH1|B8LMH1_PICSI Putative uncharacterized protein OS=Picea...    88   2e-16
tr|Q6K9G4|Q6K9G4_ORYSJ Os02g0620400 protein OS=Oryza sativa subs...    87   3e-16
tr|B8AFI0|B8AFI0_ORYSI Putative uncharacterized protein OS=Oryza...    87   3e-16
tr|A3A955|A3A955_ORYSJ Putative uncharacterized protein OS=Oryza...    87   3e-16
tr|Q0JBU4|Q0JBU4_ORYSJ Os04g0509400 protein OS=Oryza sativa subs...    86   7e-16
tr|Q7XQ13|Q7XQ13_ORYSJ OSJNBb0065L13.6 protein (Putative unchara...    85   2e-15
tr|Q01HF4|Q01HF4_ORYSA OSIGBa0157K09-H0214G12.3 protein OS=Oryza...    85   2e-15
tr|B7F8E8|B7F8E8_ORYSJ cDNA, clone: J065030M05, full insert sequ...    85   2e-15
tr|A2XVF2|A2XVF2_ORYSI Putative uncharacterized protein OS=Oryza...    85   2e-15
tr|B6U0I3|B6U0I3_MAIZE Enzyme of the cupin superfamily OS=Zea ma...    85   2e-15
tr|B8CD78|B8CD78_THAPS Predicted protein (Fragment) OS=Thalassio...    84   5e-15
tr|Q7VAA6|Q7VAA6_PROMA Predicted enzyme of the cupin superfamily...    81   2e-14
tr|Q7V6W0|Q7V6W0_PROMM Putative uncharacterized protein OS=Proch...    80   7e-14

>tr|A9TEC3|A9TEC3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_144325 PE=4 SV=1
          Length = 106

 Score =  117 bits (292), Expect = 4e-25
 Identities = 52/64 (81%), Positives = 56/64 (87%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDK 182
           CPPSKFPWTY   ETC+LL+GKVKVY EGSSE+VE GAGDLVVFPKGMS  W+VSETVDK
Sbjct: 41  CPPSKFPWTYDATETCFLLQGKVKVYPEGSSEFVEFGAGDLVVFPKGMSCTWDVSETVDK 100

Query: 183 HYNF 194
           HY F
Sbjct: 101 HYQF 104


>tr|A9NYM4|A9NYM4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 104

 Score =  111 bits (278), Expect = 2e-23
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDK 182
           CPPSKFPWTY+  ETCYLL+G+VKVY +G ++YVEIG GDLVVFPKGM   WEVSE VDK
Sbjct: 40  CPPSKFPWTYTATETCYLLEGRVKVYPDGYNDYVEIGPGDLVVFPKGMKCTWEVSEAVDK 99

Query: 183 HYNFS 197
           HY+F+
Sbjct: 100 HYSFA 104


>tr|A9NK05|A9NK05_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 169

 Score =  111 bits (278), Expect = 2e-23
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDK 182
           CPPSKFPWTY+  ETCYLL+G+VKVY +G ++YVEIG GDLVVFPKGM   WEVSE VDK
Sbjct: 105 CPPSKFPWTYTATETCYLLEGRVKVYPDGYNDYVEIGPGDLVVFPKGMKCTWEVSEAVDK 164

Query: 183 HYNFS 197
           HY+F+
Sbjct: 165 HYSFA 169


>tr|B4F9Z6|B4F9Z6_MAIZE Enzyme of the cupin superfamily OS=Zea mays
           PE=2 SV=1
          Length = 140

 Score =  109 bits (272), Expect = 8e-23
 Identities = 51/65 (78%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEG-SSEYVEIGAGDLVVFPKGMSRAWEVSETVD 179
           C  SKFPWTYS KETCYLL+GKVKVY EG   E+VEIGAGDLVVFPKGMS  W+V+E VD
Sbjct: 75  CEKSKFPWTYSAKETCYLLQGKVKVYPEGHGEEFVEIGAGDLVVFPKGMSCTWDVAEAVD 134

Query: 180 KHYNF 194
           KHYNF
Sbjct: 135 KHYNF 139


>tr|Q9SV91|Q9SV91_ARATH Putative uncharacterized protein AT4g10300
           OS=Arabidopsis thaliana GN=F24G24.100 PE=2 SV=1
          Length = 134

 Score =  108 bits (271), Expect = 1e-22
 Identities = 50/64 (78%), Positives = 52/64 (81%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDK 182
           CPPSKFPWTYS KETCYLL+GKVKVY  GS E VEI AGD VVFPKGMS  W+VS  VDK
Sbjct: 70  CPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDK 129

Query: 183 HYNF 194
           HY F
Sbjct: 130 HYQF 133


>tr|Q8LEK1|Q8LEK1_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 136

 Score =  108 bits (271), Expect = 1e-22
 Identities = 50/64 (78%), Positives = 52/64 (81%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDK 182
           CPPSKFPWTYS KETCYLL+GKVKVY  GS E VEI AGD VVFPKGMS  W+VS  VDK
Sbjct: 72  CPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDK 131

Query: 183 HYNF 194
           HY F
Sbjct: 132 HYQF 135


>tr|A9PG71|A9PG71_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 162

 Score =  108 bits (269), Expect = 2e-22
 Identities = 49/64 (76%), Positives = 54/64 (84%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDK 182
           CPPSKFPWTYS KETCYLL+GKVKVY +G+ E VEI AGDLV FPKGMS  W+V+  VDK
Sbjct: 98  CPPSKFPWTYSAKETCYLLEGKVKVYPDGAEEPVEITAGDLVEFPKGMSCTWDVAVGVDK 157

Query: 183 HYNF 194
           HYNF
Sbjct: 158 HYNF 161


>tr|B6TP17|B6TP17_MAIZE Enzyme of the cupin superfamily OS=Zea mays
           PE=2 SV=1
          Length = 145

 Score =  105 bits (263), Expect = 9e-22
 Identities = 49/65 (75%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEG-SSEYVEIGAGDLVVFPKGMSRAWEVSETVD 179
           C  SKFPWTYS KETCYLL+GKVKVY +G   E+VEI AGDLVVFPKGMS  W+V+E VD
Sbjct: 80  CEKSKFPWTYSAKETCYLLQGKVKVYPDGHGEEFVEIAAGDLVVFPKGMSCTWDVAEAVD 139

Query: 180 KHYNF 194
           KHYNF
Sbjct: 140 KHYNF 144


>tr|A7Q7Q9|A7Q7Q9_VITVI Chromosome chr18 scaffold_61, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031959001
           PE=4 SV=1
          Length = 163

 Score =  105 bits (263), Expect = 9e-22
 Identities = 47/63 (74%), Positives = 54/63 (85%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSEYVEIGAGDLVVFPKGMSRAWEVSETVDK 182
           C PSKFPWT++ KETCYLLKGKVKVY +G++E VEIGAGDLV FPKGMS  W+VS  VDK
Sbjct: 99  CEPSKFPWTFTTKETCYLLKGKVKVYPDGANECVEIGAGDLVEFPKGMSCTWDVSVAVDK 158

Query: 183 HYN 191
           HY+
Sbjct: 159 HYS 161


>tr|Q01J39|Q01J39_ORYSA OSIGBa0140O07.4 protein OS=Oryza sativa
           GN=OSIGBa0140O07.4 PE=4 SV=1
          Length = 148

 Score =  103 bits (258), Expect = 3e-21
 Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   CPPSKFPWTYSDKETCYLLKGKVKVYGEGSSE-YVEIGAGDLVVFPKGMSRAWEVSETVD 179
           C  SKFPWTYS KETCYLL+GKVKVY +G+ E +VEI AGDLVVFPKGMS  W+V+E VD
Sbjct: 83  CEKSKFPWTYSAKETCYLLQGKVKVYPDGAGEDFVEIAAGDLVVFPKGMSCTWDVAEAVD 142

Query: 180 KHYNF 194
           KHY F
Sbjct: 143 KHYKF 147