BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944464|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_C10, 5'
         (405 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q98PH6|SYT_MYCPU Threonyl-tRNA synthetase OS=Mycoplasma pulmo...    30   2.8  
sp|Q9Y3M8|STA13_HUMAN StAR-related lipid transfer protein 13 OS=...    30   4.8  
sp|Q8R4P5|TMC1_MOUSE Transmembrane channel-like protein 1 OS=Mus...    29   6.3  
sp|Q8TDI8|TMC1_HUMAN Transmembrane channel-like protein 1 OS=Hom...    29   6.3  

>sp|Q98PH6|SYT_MYCPU Threonyl-tRNA synthetase OS=Mycoplasma pulmonis
           GN=thrS PE=3 SV=1
          Length = 589

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -3

Query: 316 SYYQNYRIHSPH*QQRSLAPKPNTFPDILLL*SSHPRESRNALTFLFDQASLFQFE 149
           ++YQ     S   +   L P+P T P  +++  + PR  R     L +Q+ L+++E
Sbjct: 260 AHYQETMFKSLEVENEKLIPRPMTCPHHIIIYDAFPRSYRELPLRLSEQSRLYRYE 315


>sp|Q9Y3M8|STA13_HUMAN StAR-related lipid transfer protein 13
           OS=Homo sapiens GN=STARD13 PE=1 SV=2
          Length = 1113

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = -3

Query: 298 RIHSPH*QQRSLAP-----KPNTFPDILLL*SSHPRESRNALTFLFDQASLFQFESPNDS 134
           R+H  H Q+  +       KP TFP  L + S  P +S N + +     SL + + P   
Sbjct: 383 RMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRTGSISLGREQVPGAR 442

Query: 133 *HKSVQCCHHTS 98
             + +  CH  S
Sbjct: 443 EPRLMASCHRAS 454


>sp|Q8R4P5|TMC1_MOUSE Transmembrane channel-like protein 1 OS=Mus
           musculus GN=Tmc1 PE=1 SV=1
          Length = 757

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 21/84 (25%), Positives = 34/84 (40%)
 Frame = +2

Query: 137 IVWGLELEQRSLIK*ERQSVATLSWMGRSQQQDVWKSVGFWCQTSLLLMWRMYSVVLVVA 316
           I W ++  Q       +Q   TL W  +++   V   +G +C T   L   +     ++A
Sbjct: 377 IFWAVKRSQEFA----QQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIA 432

Query: 317 LPWCM*TSSLLNLSPFYCFGLPLI 388
           L W +     L L   Y F L L+
Sbjct: 433 LKWLLGRIFALLLGNLYVFILALM 456


>sp|Q8TDI8|TMC1_HUMAN Transmembrane channel-like protein 1 OS=Homo
           sapiens GN=TMC1 PE=1 SV=2
          Length = 760

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 21/84 (25%), Positives = 34/84 (40%)
 Frame = +2

Query: 137 IVWGLELEQRSLIK*ERQSVATLSWMGRSQQQDVWKSVGFWCQTSLLLMWRMYSVVLVVA 316
           I W ++  Q       +Q   TL W  +++   V   +G +C T   L   +     ++A
Sbjct: 383 IFWAVKRSQEFA----QQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIA 438

Query: 317 LPWCM*TSSLLNLSPFYCFGLPLI 388
           L W +     L L   Y F L L+
Sbjct: 439 LKWLLGRIFALLLGNLYVFILALM 462

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944464|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_C10, 5'
         (405 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1ZND0|A1ZND0_9SPHI Sodium/alanine symporter OS=Microscilla m...    34   3.2  
tr|A4XHL1|A4XHL1_CALS8 Putative uncharacterized protein OS=Caldi...    34   4.2  

>tr|A1ZND0|A1ZND0_9SPHI Sodium/alanine symporter OS=Microscilla
           marina ATCC 23134 GN=M23134_02151 PE=4 SV=1
          Length = 501

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = -1

Query: 276 SNEVWHQNPTLFQTSCCCDRPIQERVATL*RSYLIKLLCSNSSPQTIVSTKVYSVATIHH 97
           SNE    + ++  ++   D P+ E +  L   ++  ++    +   I+ T+ YSV T ++
Sbjct: 321 SNEAGIGSASIAHSAAKTDEPVSEGIVALLEPFIDTVVICTMTALVIIITQSYSVPTSNN 380

Query: 96  SEKNALTHHLAGS 58
           SE  ALT    GS
Sbjct: 381 SEAIALTSKAFGS 393


>tr|A4XHL1|A4XHL1_CALS8 Putative uncharacterized protein
           OS=Caldicellulosiruptor saccharolyticus (strain ATCC
           43494 / DSM 8903) GN=Csac_0777 PE=4 SV=1
          Length = 166

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 212 MGRSQQQDVWKSVGFWCQTSLLLMWRMYSVVLVVALPWCM*TSSLLNLSP---FYCFGLP 382
           +GR   ++VWK +G + +   +  W++  +VL+ +    +  S L  +     FY FG+P
Sbjct: 83  VGRYGFEEVWKQIGIYTKPDFIRPWKLTKIVLLTSCCTAVIISILKIIETKNFFYLFGIP 142

Query: 383 L 385
           +
Sbjct: 143 I 143