DK944483 |
Clone id |
YMU02A01NGRL0006_D12 |
Library |
YMU02 |
Length |
402 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_D12. 5' end sequence. |
Accession |
DK944483 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
CAAGAAGGGAAGACTTATGTTGTTCAAGATGGGGATATCATTTTCTTCAAGTTCAATGTC ACAGCAGCAGCAGCCAAAAAGTGAAATTTTATAAGAAGCTCCGCCTGGCTTTCTGGGTCT GCTTTGAACTCATTTGGCTAAATTGGCACCAATATTCTTGCTATTCCTGGTTCTAGGCCC CATTATCAGAAAGGGCTTCAATTTCTTTTGGAAAAGCCAGTTGATTAGCAATCCTTCCCA AGTTGCGGTGCATGGTGTCCCAGCTATGCATGCCTTCATGCTATAGCTTTTAGCCAATAA ATTTTTTTAAGAGGAGGTTGTGTTGTAATGAAGATGGTTAAGTGATTGAAATGGAGGTCT TTGTTTAGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P91917 |
Definition |
sp|P91917|TG210_CAEEL Putative GTP-binding protein tag-210 OS=Caenorhabditis elegans |
Align length |
27 |
Score (bit) |
43.1 |
E-value |
0.0004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TD27 |
Definition |
tr|A9TD27|A9TD27_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
26 |
Score (bit) |
48.5 |
E-value |
0.0002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944483|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_D12, 5' (372 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TD27|A9TD27_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04 tr|A4S8Y5|A4S8Y5_OSTLU Predicted protein OS=Ostreococcus lucimar... 48 3e-04 tr|A9V629|A9V629_MONBE Predicted protein OS=Monosiga brevicollis... 47 4e-04 tr|Q9SA73|Q9SA73_ARATH T5I8.3 protein (At1g30580) OS=Arabidopsis... 47 5e-04 tr|Q9M7P3|Q9M7P3_CAPAN GTP-binding protein OS=Capsicum annuum PE... 47 5e-04 tr|Q6Z1J6|Q6Z1J6_ORYSJ cDNA clone:001-047-G08, full insert seque... 47 5e-04 tr|Q0J7E5|Q0J7E5_ORYSJ Os08g0199300 protein (Fragment) OS=Oryza ... 47 5e-04 tr|B8BBN8|B8BBN8_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|B7FK99|B7FK99_MEDTR Putative uncharacterized protein OS=Medic... 47 5e-04 tr|B4FUE0|B4FUE0_MAIZE GTP-binding protein PTD004 OS=Zea mays PE... 47 5e-04 tr|A3BQJ0|A3BQJ0_ORYSJ Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|Q8LDR5|Q8LDR5_ARATH Putative GTP-binding protein OS=Arabidops... 45 0.002 tr|A8I882|A8I882_CHLRE Predicted protein OS=Chlamydomonas reinha... 45 0.002 tr|B8BBN7|B8BBN7_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A7Q4M8|A7Q4M8_VITVI Chromosome chr10 scaffold_50, whole genom... 45 0.002 tr|A5C565|A5C565_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A7S018|A7S018_NEMVE Predicted protein OS=Nematostella vectens... 44 0.004 tr|A8I495|A8I495_CHLRE Flagellar associated protein OS=Chlamydom... 44 0.005 tr|A9NWU7|A9NWU7_PICSI Putative uncharacterized protein OS=Picea... 43 0.007 tr|Q5CSG8|Q5CSG8_CRYPV YyaF/YCHF TRANSFAC/OBG family small GTpas... 43 0.007 tr|Q5CNH6|Q5CNH6_CRYHO GTP-binding protein OS=Cryptosporidium ho... 43 0.007 tr|B6KSE5|B6KSE5_TOXGO GTP binding protein, putative OS=Toxoplas... 43 0.007 tr|A8XXM7|A8XXM7_CAEBR CBR-TAG-210 protein OS=Caenorhabditis bri... 43 0.007 tr|A7AMK2|A7AMK2_BABBO GTP-binding protein YchF domain containin... 43 0.007 tr|Q00TM8|Q00TM8_OSTTA GTP-binding protein (ISS) OS=Ostreococcus... 43 0.009 tr|Q4XLB7|Q4XLB7_PLACH Conserved GTP-binding protein, putative O... 43 0.009 tr|B6AI40|B6AI40_9CRYT GTP-binding protein, putative OS=Cryptosp... 43 0.009 tr|B3L0B3|B3L0B3_PLAKH GTP-binding protein, putative OS=Plasmodi... 43 0.009 tr|Q8IBM9|Q8IBM9_PLAF7 Conserved GTP-binding protein, putative O... 42 0.012 tr|Q7RMB5|Q7RMB5_PLAYO GTP-binding protein OS=Plasmodium yoelii ... 42 0.012
>tr|A9TD27|A9TD27_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_221131 PE=4 SV=1 Length = 394
Score = 48.5 bits (114), Expect = 2e-04 Identities = 22/26 (84%), Positives = 23/26 (88%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGK YVVQDGDIIFFKFNVTA+ K Sbjct: 369 QEGKNYVVQDGDIIFFKFNVTASGKK 394
>tr|A4S8Y5|A4S8Y5_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28010 PE=4 SV=1 Length = 400
Score = 47.8 bits (112), Expect = 3e-04 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAKK 81 QEGKTY VQD D+IFFKFNV+ AA KK Sbjct: 374 QEGKTYTVQDADVIFFKFNVSGAAKKK 400
>tr|A9V629|A9V629_MONBE Predicted protein OS=Monosiga brevicollis GN=38170 PE=4 SV=1 Length = 394
Score = 47.4 bits (111), Expect = 4e-04 Identities = 21/22 (95%), Positives = 22/22 (100%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTA 66 Q+GKTYVVQDGDIIFFKFNVTA Sbjct: 370 QQGKTYVVQDGDIIFFKFNVTA 391
>tr|Q9SA73|Q9SA73_ARATH T5I8.3 protein (At1g30580) OS=Arabidopsis thaliana GN=At1g30580 PE=2 SV=1 Length = 394
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGKTYVVQDGDIIFFKFNV+ K Sbjct: 369 QEGKTYVVQDGDIIFFKFNVSGGGKK 394
>tr|Q9M7P3|Q9M7P3_CAPAN GTP-binding protein OS=Capsicum annuum PE=2 SV=1 Length = 394
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGKTYVVQDGDIIFFKFNV+ K Sbjct: 369 QEGKTYVVQDGDIIFFKFNVSGGGKK 394
>tr|Q6Z1J6|Q6Z1J6_ORYSJ cDNA clone:001-047-G08, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0094P23.28 PE=2 SV=1 Length = 394
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGKTYVVQDGDIIFFKFNV+ K Sbjct: 369 QEGKTYVVQDGDIIFFKFNVSGGGKK 394
>tr|Q0J7E5|Q0J7E5_ORYSJ Os08g0199300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os08g0199300 PE=4 SV=1 Length = 397
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGKTYVVQDGDIIFFKFNV+ K Sbjct: 372 QEGKTYVVQDGDIIFFKFNVSGGGKK 397
>tr|B8BBN8|B8BBN8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28173 PE=4 SV=1 Length = 99
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGKTYVVQDGDIIFFKFNV+ K Sbjct: 74 QEGKTYVVQDGDIIFFKFNVSGGGKK 99
>tr|B7FK99|B7FK99_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 394
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGKTYVVQDGDIIFFKFNV+ K Sbjct: 369 QEGKTYVVQDGDIIFFKFNVSGGGKK 394
>tr|B4FUE0|B4FUE0_MAIZE GTP-binding protein PTD004 OS=Zea mays PE=2 SV=1 Length = 393
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +1
Query: 1 QEGKTYVVQDGDIIFFKFNVTAAAAK 78 QEGKTYVVQDGDIIFFKFNV+ K Sbjct: 368 QEGKTYVVQDGDIIFFKFNVSGGGKK 393
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