DK944493 |
Clone id |
YMU02A01NGRL0006_D23 |
Library |
YMU02 |
Length |
423 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_D23. 5' end sequence. |
Accession |
DK944493 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GCTCTTGGAGGCACTTCGTGATCATGGAGCAAACATGTCAATAAAGGATCTGAGTTTAAT GACAGGCATTCGTAATGAAGATATCATTAACACGCTTCAATCTTTAAATCTGATCAAGTA TTACAAAGGTCAGCATATCATTTCTGTATCTGCAAAAGTGATCGAGGAACACCTTAAGAC ATTCAGTCCTCAGCCATTTTGGGTGATTGATCCTGCTAAACTCTTATGGACTCCATTGGC AAGTCCTTCGACAAGGAGACCAAAATGATTTTTTAATGTTTTTTGCTCAGCCTATATTTA AATTTGAGGCTCCCAATTGTTATGGGATGACCTTACATAAGACAAATGTGAAGCTTAAAA ACGTGTAATATATGATAGAAAATGTTCATGGCCNANAAAAAAAAAAAAAAAAAAAAAAAA AAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XI06 |
Definition |
sp|Q5XI06|MYST1_RAT Probable histone acetyltransferase MYST1 OS=Rattus norvegicus |
Align length |
79 |
Score (bit) |
84.7 |
E-value |
1.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0G130 |
Definition |
tr|B0G130|B0G130_DICDI HAM group protein OS=Dictyostelium discoideum |
Align length |
88 |
Score (bit) |
100.0 |
E-value |
4.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944493|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_D23, 5' (396 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0G130|B0G130_DICDI HAM group protein OS=Dictyostelium discoi... 100 4e-20 tr|Q28CP4|Q28CP4_XENTR Myst histone acetyltransferase 2 OS=Xenop... 85 2e-15 tr|B7ZU40|B7ZU40_XENTR Myst1 protein OS=Xenopus tropicalis GN=my... 85 2e-15 tr|B7Q9K5|B7Q9K5_IXOSC Myst histone acetyltransferase, putative ... 85 2e-15 tr|Q4SAS3|Q4SAS3_TETNG Chromosome 3 SCAF14679, whole genome shot... 85 2e-15 tr|Q3V268|Q3V268_MOUSE Putative uncharacterized protein OS=Mus m... 85 2e-15 tr|A3KN50|A3KN50_BOVIN MYST1 protein OS=Bos taurus GN=MYST1 PE=2... 85 2e-15 tr|A8K4Z1|A8K4Z1_HUMAN cDNA FLJ78028 OS=Homo sapiens GN=MYST1 PE... 85 2e-15 tr|A9RAZ9|A9RAZ9_PHYPA Histone acetyltransferase OS=Physcomitrel... 84 3e-15 tr|A9JTB7|A9JTB7_DANRE MYST histone acetyltransferase 1 OS=Danio... 84 3e-15 tr|Q869X5|Q869X5_DICDI Similar to Oryza sativa (Japonica cultiva... 84 5e-15 tr|B6MQ41|B6MQ41_BRAFL Putative uncharacterized protein (Fragmen... 84 5e-15 tr|B6MN47|B6MN47_BRAFL Putative uncharacterized protein OS=Branc... 84 5e-15 tr|A7S8T4|A7S8T4_NEMVE Predicted protein OS=Nematostella vectens... 84 5e-15 tr|A8HUP5|A8HUP5_CHLRE Histone acetyltransferase OS=Chlamydomona... 83 8e-15 tr|Q7SXF3|Q7SXF3_DANRE MYST histone acetyltransferase 1 OS=Danio... 82 1e-14 tr|Q0D4H1|Q0D4H1_ORYSJ Os07g0626600 protein OS=Oryza sativa subs... 80 5e-14 tr|A8J386|A8J386_CHLRE MYST family histone acetyltransferase OS=... 80 5e-14 tr|A3BME4|A3BME4_ORYSJ Putative uncharacterized protein OS=Oryza... 80 5e-14 tr|A2YNW7|A2YNW7_ORYSI Putative uncharacterized protein OS=Oryza... 80 5e-14 tr|A5JPL6|A5JPL6_BOMMO MOF protein OS=Bombyx mori PE=2 SV=1 80 5e-14 tr|A4K580|A4K580_BOMMO Putative MYST histone acetyltransferase (... 80 5e-14 tr|Q0Z9W0|Q0Z9W0_WHEAT Histone acetyltransferase HAT1 OS=Triticu... 80 7e-14 tr|Q011W0|Q011W0_OSTTA Histone acetyltransferase (MYST family) (... 80 7e-14 tr|Q8W513|Q8W513_MAIZE Histone aceytl-transferase HAC108 (Putati... 79 9e-14 tr|Q8L818|Q8L818_MAIZE Histone acetyltransferase protein HAC108 ... 79 9e-14 tr|O80378|O80378_DAUCA 181 (Fragment) OS=Daucus carota GN=181-1d... 79 1e-13 tr|A9RJM4|A9RJM4_PHYPA Histone acetyltransferase OS=Physcomitrel... 79 1e-13 tr|A7NV61|A7NV61_VITVI Chromosome chr18 scaffold_1, whole genome... 79 1e-13 tr|Q6V9I3|Q6V9I3_SOLCH MYST-type acetyltransferase (Fragment) OS... 78 2e-13
>tr|B0G130|B0G130_DICDI HAM group protein OS=Dictyostelium discoideum GN=DDB_0233630 PE=4 SV=1 Length = 657
Score = 100 bits (249), Expect = 4e-20 Identities = 52/88 (59%), Positives = 64/88 (72%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LR H N+SI D+S MT IR ED+I+TLQSLNLI+Y+KGQHIISV+ K IEEHLK Sbjct: 571 LLEILRKHKGNLSILDISNMTSIRTEDVISTLQSLNLIRYWKGQHIISVTPKAIEEHLKV 630
Query: 182 FSPQPFWVIDPAKLLWTPLASPSTRRPK 265 +S Q IDP + W PL P+T + + Sbjct: 631 YSKQT-TRIDPKCIHWAPLNPPTTTKKR 657
>tr|Q28CP4|Q28CP4_XENTR Myst histone acetyltransferase 2 OS=Xenopus tropicalis GN=myst1 PE=2 SV=1 Length = 465
Score = 85.1 bits (209), Expect = 2e-15 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DII TLQSLN++KY+KGQH+I V+ K++EEHLK+ Sbjct: 376 LLEILRDFRGTLSIKDLSQMTSITQNDIIGTLQSLNMVKYWKGQHVICVTPKLVEEHLKS 435
Query: 182 FS-PQPFWVIDPAKLLWTP 235 +P +D L W P Sbjct: 436 AQYKKPPITVDSINLKWAP 454
>tr|B7ZU40|B7ZU40_XENTR Myst1 protein OS=Xenopus tropicalis GN=myst1 PE=2 SV=1 Length = 450
Score = 85.1 bits (209), Expect = 2e-15 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DII TLQSLN++KY+KGQH+I V+ K++EEHLK+ Sbjct: 361 LLEILRDFRGTLSIKDLSQMTSITQNDIIGTLQSLNMVKYWKGQHVICVTPKLVEEHLKS 420
Query: 182 FS-PQPFWVIDPAKLLWTP 235 +P +D L W P Sbjct: 421 AQYKKPPITVDSINLKWAP 439
>tr|B7Q9K5|B7Q9K5_IXOSC Myst histone acetyltransferase, putative (Fragment) OS=Ixodes scapularis GN=IscW_ISCW020926 PE=4 SV=1 Length = 441
Score = 85.1 bits (209), Expect = 2e-15 Identities = 45/89 (50%), Positives = 60/89 (67%), Gaps = 1/89 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DI+ TLQSLN++KY+KGQH+I V+ K++EEHL++ Sbjct: 352 LLEILRDFRGTLSIKDLSQMTSITQNDIVTTLQSLNMVKYWKGQHVICVTPKLVEEHLRS 411
Query: 182 FS-PQPFWVIDPAKLLWTPLASPSTRRPK 265 +P +D + L WT P +RPK Sbjct: 412 AQYKKPRLSVDISCLRWT----PPKKRPK 436
>tr|Q4SAS3|Q4SAS3_TETNG Chromosome 3 SCAF14679, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00021290001 PE=4 SV=1 Length = 490
Score = 84.7 bits (208), Expect = 2e-15 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DII+TLQSLN++KY+KGQH+I V+ K++EEHLK+ Sbjct: 401 LLEILRDFRGTLSIKDLSQMTSITQSDIISTLQSLNMVKYWKGQHVICVTPKLVEEHLKS 460
Query: 182 FS-PQPFWVIDPAKLLWTP 235 +P +D L W P Sbjct: 461 AQYKKPPITVDTVCLKWAP 479
>tr|Q3V268|Q3V268_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Myst1 PE=2 SV=1 Length = 458
Score = 84.7 bits (208), Expect = 2e-15 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DII+TLQSLN++KY+KGQH+I V+ K++EEHLK+ Sbjct: 369 LLEILRDFRGTLSIKDLSQMTSITQNDIISTLQSLNMVKYWKGQHVICVTPKLVEEHLKS 428
Query: 182 FS-PQPFWVIDPAKLLWTP 235 +P +D L W P Sbjct: 429 AQYKKPPITVDSVCLKWAP 447
>tr|A3KN50|A3KN50_BOVIN MYST1 protein OS=Bos taurus GN=MYST1 PE=2 SV=1 Length = 458
Score = 84.7 bits (208), Expect = 2e-15 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DII+TLQSLN++KY+KGQH+I V+ K++EEHLK+ Sbjct: 369 LLEILRDFRGTLSIKDLSQMTSITQNDIISTLQSLNMVKYWKGQHVICVTPKLVEEHLKS 428
Query: 182 FS-PQPFWVIDPAKLLWTP 235 +P +D L W P Sbjct: 429 AQYKKPPITVDSVCLKWAP 447
>tr|A8K4Z1|A8K4Z1_HUMAN cDNA FLJ78028 OS=Homo sapiens GN=MYST1 PE=2 SV=1 Length = 458
Score = 84.7 bits (208), Expect = 2e-15 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DII+TLQSLN++KY+KGQH+I V+ K++EEHLK+ Sbjct: 369 LLEILRDFRGTLSIKDLSQMTSITQNDIISTLQSLNMVKYWKGQHVICVTPKLVEEHLKS 428
Query: 182 FS-PQPFWVIDPAKLLWTP 235 +P +D L W P Sbjct: 429 AQYKKPPITVDSVCLKWAP 447
>tr|A9RAZ9|A9RAZ9_PHYPA Histone acetyltransferase OS=Physcomitrella patens subsp. patens GN=HAM1502 PE=4 SV=1 Length = 296
Score = 84.3 bits (207), Expect = 3e-15 Identities = 43/61 (70%), Positives = 52/61 (85%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRDH N+SIKDL+ MT IR ED++ TLQ+LNLIKY+KGQ+IISV+AK I+EHLK Sbjct: 226 LLEILRDHH-NVSIKDLTAMTSIRYEDVVTTLQTLNLIKYWKGQYIISVTAKHIDEHLKV 284
Query: 182 F 184 F Sbjct: 285 F 285
>tr|A9JTB7|A9JTB7_DANRE MYST histone acetyltransferase 1 OS=Danio rerio GN=myst1 PE=2 SV=1 Length = 487
Score = 84.0 bits (206), Expect = 3e-15 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%) Frame = +2
Query: 2 LLEALRDHGANMSIKDLSLMTGIRNEDIINTLQSLNLIKYYKGQHIISVSAKVIEEHLKT 181 LLE LRD +SIKDLS MT I DII+TLQSLN++KY+KGQH+I V+ K++EEHLK+ Sbjct: 398 LLEILRDFRGTLSIKDLSQMTSITQSDIISTLQSLNMVKYWKGQHVICVTPKLVEEHLKS 457
Query: 182 FS-PQPFWVIDPAKLLWTP 235 +P +D L W P Sbjct: 458 AQYKKPPITVDTHCLKWAP 476
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