BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944494|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_D24, 5'
         (207 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3     29   6.4  
sp|P22384|TAT_SIVGB Protein Tat OS=Simian immunodeficiency virus...    29   8.4  

>sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3
          Length = 6885

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2

Query: 137 KCSRLQARQQMSTRKQLL 84
           KCS++QAR QMS RK LL
Sbjct: 171 KCSKVQARWQMSARKALL 188


>sp|P22384|TAT_SIVGB Protein Tat OS=Simian immunodeficiency virus
           (isolate GB1) GN=tat PE=1 SV=1
          Length = 115

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 115 DSRCPPENSCSRQIAYKMALKHSYLSLQ 32
           D  CPP++S   +I YK  L+  Y  LQ
Sbjct: 8   DHNCPPQDSGQEEIDYKQLLEEYYQPLQ 35

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944494|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_D24, 5'
         (207 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8RWY9|A8RWY9_9CLOT Putative uncharacterized protein OS=Clost...    33   9.2  

>tr|A8RWY9|A8RWY9_9CLOT Putative uncharacterized protein
           OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_04743 PE=4
           SV=1
          Length = 218

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 10/34 (29%), Positives = 23/34 (67%)
 Frame = +2

Query: 92  VFWWTSAV*PVVVNILVFGRLPQVLDTHFMIENV 193
           + +W +A+ P ++++  + RLP ++ TH+  +NV
Sbjct: 13  IMYWLTALVPFIISVCFYNRLPDLVPTHWGTDNV 46