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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944501
Clone id YMU02A01NGRL0006_E09
Library
Length 521
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_E09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TATCGTAGCGGGTATAGTTTAGTGGTAAAAATGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT
ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT
CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA
CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAAATCTATGGGTAGACGT
CTAAGATAGCTGACCCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGG
AATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCT
CGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTGAAAAAAAAAAAAA
ATAAAGAACGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6FJJ9
Definition sp|Q6FJJ9|ALG2_CANGA Alpha-1,3-mannosyltransferase ALG2 OS=Candida glabrata
Align length 76
Score (bit) 30.0
E-value 5.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944501|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_E09, 5'
         (467 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6FJJ9|ALG2_CANGA Alpha-1,3-mannosyltransferase ALG2 OS=Candi...    30   5.2  

>sp|Q6FJJ9|ALG2_CANGA Alpha-1,3-mannosyltransferase ALG2 OS=Candida
           glabrata GN=ALG2 PE=3 SV=1
          Length = 458

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = -1

Query: 452 REIYLTELLKRGIPFNQIDVQ*S*QTRIYLFQLSFPDLFSEV**RWVSYLRRLPIDF--- 282
           +++++ + L   +PF ++           LF   FPD    +   W+  L R+P D    
Sbjct: 102 KDVFIIDQLSTCVPFFKL------ANNKVLFYCHFPDQLLAIRTNWIKSLYRIPFDLLEQ 155

Query: 281 FSLFISPEVEIKPSIS 234
           F+++ S EV +  + +
Sbjct: 156 FTMYCSDEVVVNSNFT 171
tr_hit_id A6D2J9
Definition tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length 50
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944501|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_E09, 5'
         (467 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri...    35   1.9  

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
           shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
          Length = 319

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/50 (32%), Positives = 31/50 (62%)
 Frame = -1

Query: 188 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39
           LK +++E+D ST +     ++++F A  +F+L VNL + R++  Q  C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283