DK944502
Clone id YMU02A01NGRL0006_E10
Library
Length 301
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_E10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGAAGGAAGAGAAGAAAGAAGAGAAGGAGGAATCTGATGATGACATGGGCTTCAGTCTCT
TCGACTAAATTGTTATTCTTGTGATTCGACTACAACTGGAAGTCTCATGGATGCTTTACA
AGTCAATGAGATCTCAAACTTTGTATACTGGTTCTGGCAATGAACTTGGCCAGGTTTTGG
ATAACTTTAATCATAGAGCAGTTTTGTGATCAACCCTTTGTAGTGACATTTGTCAAGGTG
GTGCTCAAGTAAATCGAGCTATTTTTGAGACCNAAAAAAAAAAAAAAAAAAAAAAAAAAA
A
■■Homology search results ■■ -
sp_hit_id Q59LR2
Definition sp|Q59LR2|ATR_CANAL Serine/threonine-protein kinase MEC1 OS=Candida albicans
Align length 26
Score (bit) 28.9
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_E10, 5'
(256 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q59LR2|ATR_CANAL Serine/threonine-protein kinase MEC1 OS=Cand... 29 8.2
sp|Q55D99|PAKA_DICDI Serine/threonine-protein kinase pakA OS=Dic... 29 8.3

>sp|Q59LR2|ATR_CANAL Serine/threonine-protein kinase MEC1 OS=Candida
albicans GN=MEC1 PE=3 SV=1
Length = 2325

Score = 28.9 bits (63), Expect = 8.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2

Query: 255 DLLEHHLDKCHYKGLITKLLYD*SYP 178
DLLE+ + + KG+++KL+YD S P
Sbjct: 317 DLLENFMSFSNIKGILSKLIYDDSIP 342


>sp|Q55D99|PAKA_DICDI Serine/threonine-protein kinase pakA
OS=Dictyostelium discoideum GN=pakA PE=1 SV=1
Length = 1197

Score = 28.9 bits (63), Expect = 8.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3

Query: 102 VSWMLYKSMRSQTLYTGSGNELGQVLDNFNH 194
V + Y S+ S Y+GSGN + +++N N+
Sbjct: 98 VGYHQYSSVNSGNSYSGSGNNINNIINNSNN 128


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_E10, 5'
(256 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******