DK944521
Clone id YMU02A01NGRL0006_F12
Library
Length 449
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_F12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TAGGTTTTATTCTATCTTGTTATGTCCCGTTTCAGTAGATAAAGCTTTGCGCTCGGTCTT
TGCTGCTTGAAGGTCAGGTTAGCCAGTTTGTTTTGGCCAATGGGGAAAGGAAAAGGCATT
GTATATACTTTCCTCGAGTAGTAGTTCGTCTGTTTGCGAGGTCTATGGTTACTAGCATCT
TTTTGAAGAAATGGAAAGGTTTTATTTATTGACGTTTTTCTGCTGAAAGGGTTGTGCTGT
TATCGGTCAGTTCTGTGCAGCAGGGGAGGTTTGTTTCCCCCTTCTTGCACTCGGTTTGAG
GGGGTTTAGCACATCAGCCTCAGTTCTCGCCTCCCTTTGCTTATGTTTGGTTGGTTTCTA
CCTGGTTGTTTATGAATCATGACTCCTAGTTATACAGAAGAGCTTTTATTTGGAGTGTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P91699
Definition sp|P91699|DECA_DROPS Protein decapentaplegic OS=Drosophila pseudoobscura pseudoobscura
Align length 89
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944521|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_F12, 5'
(419 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P91699|DECA_DROPS Protein decapentaplegic OS=Drosophila pseud... 31 1.7
sp|Q1KVX6|CHLN_SCEOB Light-independent protochlorophyllide reduc... 30 2.9
sp|P32495|NHP2_YEAST H/ACA ribonucleoprotein complex subunit 2 O... 29 6.4
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ... 29 8.4
sp|Q5QD51|AKA12_RAT A-kinase anchor protein 12 OS=Rattus norvegi... 29 8.4

>sp|P91699|DECA_DROPS Protein decapentaplegic OS=Drosophila
pseudoobscura pseudoobscura GN=dpp PE=2 SV=3
Length = 616

Score = 31.2 bits (69), Expect = 1.7
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = -1

Query: 374 HKQPGRNQPNISKGRRELRLM----C*TPSNRVQEGGNKPPLLHRTDR*QHNPFSRKTSI 207
+K N N++KG R + + +NR +KP RTD+ +++ K +
Sbjct: 91 YKNRNNNNNNLNKGPRNNKNKGNKHSKSDANRQFNEVHKP----RTDQLENSKNKPKQLV 146

Query: 206 NKTFPFLQKDASNHRPRKQTNYYSRKVYT 120
NKT KD +H+P++Q + + T
Sbjct: 147 NKTNKMAVKDQKHHQPQQQQQQHHKPATT 175


>sp|Q1KVX6|CHLN_SCEOB Light-independent protochlorophyllide
reductase subunit N OS=Scenedesmus obliquus GN=chlN PE=3
SV=1
Length = 560

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2

Query: 247 TDNSTTLSAEKRQ*IKPFHFFKKM 176
T+NS T SAEK++ PF FFK +
Sbjct: 200 TENSKTFSAEKKKTQNPFEFFKSL 223


>sp|P32495|NHP2_YEAST H/ACA ribonucleoprotein complex subunit 2
OS=Saccharomyces cerevisiae GN=NHP2 PE=1 SV=2
Length = 156

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -1

Query: 182 KDASNHRPRKQT----NYYSRKVYTMPFPFPIGQNKLANLTFKQQRPSAKLYLLKRDI 21
KD H+ K++ NY +R +PF P+ KL K + ++K +KR +
Sbjct: 3 KDNKEHKESKESKTVDNYEARMPAVLPFAKPLASKKLNKKVLKTVKKASKAKNVKRGV 60


>sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2
OS=Homo sapiens GN=SRRM2 PE=1 SV=2
Length = 2752

Score = 28.9 bits (63), Expect = 8.4
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = -1

Query: 350 PNISKGRRELRLMC*TPSNRVQEGGNKPPLLHRTDR*QHNPFSRKTSINKTFPFLQKDAS 171
P +++ R R TP+ R + PP+ R R + P +R+ S ++T P ++
Sbjct: 1928 PPVTRRRSRSR----TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRR--- 1980

Query: 170 NHRPRKQTNYYSRK 129
R R +T+ +R+
Sbjct: 1981 --RSRSRTSPVTRR 1992


>sp|Q5QD51|AKA12_RAT A-kinase anchor protein 12 OS=Rattus norvegicus
GN=Akap12 PE=1 SV=1
Length = 1687

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2

Query: 307 KPPQTEC-KKGETNLPCCTELTDNSTTLSAEKRQ*IKPFHFFKKML 173
+P +T C +KG P E + +T+ +KR+ I P+ FKKM+
Sbjct: 559 EPEETTCLEKGPLEAPQDGEAEEGTTSDGEKKREGITPWASFKKMV 604


tr_hit_id B3LBX7
Definition tr|B3LBX7|B3LBX7_PLAKH Inositol polyphosphate kinase, putative OS=Plasmodium knowlesi (strain H)
Align length 57
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944521|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_F12, 5'
(419 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3LBX7|B3LBX7_PLAKH Inositol polyphosphate kinase, putative O... 33 5.4
tr|B4QT80|B4QT80_DROSI GD18284 OS=Drosophila simulans GN=GD18284... 33 9.2
tr|B4MRN9|B4MRN9_DROWI GK15714 OS=Drosophila willistoni GN=GK157... 33 9.2

>tr|B3LBX7|B3LBX7_PLAKH Inositol polyphosphate kinase, putative
OS=Plasmodium knowlesi (strain H) GN=PKH_141540 PE=4
SV=1
Length = 1315

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = -1

Query: 380 MIHKQPGRNQPNISKGRRELRLMC*TPSNRVQEGGNKPPLLHRTDR*QHNPFSRKTS 210
++ KQ RN+PN SKGR+ L +++ E + P RTD+ P SR+ S
Sbjct: 83 LVRKQKRRNEPNSSKGRKYFSLEERDKKDKLDEQPSNEPTSQRTDQSAKEP-SREPS 138


>tr|B4QT80|B4QT80_DROSI GD18284 OS=Drosophila simulans GN=GD18284
PE=4 SV=1
Length = 647

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -1

Query: 407 KSSSV*LGVMIHKQPGRNQPNISKGRRELRLMC*TPSNRVQEGGNKPPLLHRTDR*QHNP 228
+SSS L ++P + + +GRR +P R ++G PP R D Q P
Sbjct: 152 RSSSRDLSPARSRKPAKREECPQRGRRRAASSDQSPPRRGRDGDQSPPRRKRRDSDQSPP 211

Query: 227 FSRKTSINKTFPF-LQKDASNHRPRKQT 147
RK +K P ++D+ PRK+T
Sbjct: 212 --RKARNDKHSPARKRRDSDQSPPRKRT 237


>tr|B4MRN9|B4MRN9_DROWI GK15714 OS=Drosophila willistoni GN=GK15714
PE=4 SV=1
Length = 1503

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -1

Query: 203 KTFPFLQKDASNHRPRKQTNYYSRKVYTMPFPFPIGQNKLANLTFKQQRPSAKL 42
K PFLQK N +Q S+ T+P P Q + + T+KQQ PS KL
Sbjct: 1225 KKAPFLQKAKDNRSALRQRREQSK--ITVPQKAPPKQEQDLSRTWKQQHPSGKL 1276