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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944524
Clone id YMU02A01NGRL0006_F16
Library
Length 352
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_F16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GATGCGCGTGAGTCGCGCGATGGTAGCTCCTATGCCCTCGCTTCTCTGCTCCACGCGTCT
GCAGTTTCAGATTCGGGGACGGCTTGCATGCTCACCTTCGCCAACCTCTGCCAGGTGCGC
CATGTTCTGCCCATGGTCTTTGATTGCCTTCGGATCTGGCTCATGTTTGCGGGATGGCTT
CTTGTGGAGTTCTCATTTTCGGTTGTGGTCTGAGATGGGATTAAATAGGCGGGTCTTGAG
GTTGGGACTGTTGGGCGTCTTTGAGAGTTGTATATCAGGTATTGTTCTTCTTCTTCAGCA
TGTGTTGGGTATGTAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q4WXQ7
Definition sp|Q4WXQ7|NST1_ASPFU Stress response protein nst1 OS=Aspergillus fumigatus
Align length 34
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944524|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_F16, 5'
         (314 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4WXQ7|NST1_ASPFU Stress response protein nst1 OS=Aspergillus...    31   2.2  
sp|A1D731|NST1_NEOFI Stress response protein nst1 OS=Neosartorya...    30   2.9  
sp|Q6IQC7|TXD14_DANRE Thioredoxin domain-containing protein 14 O...    30   4.9  
sp|Q5XHJ5|RSRC2_XENTR Arginine/serine-rich coiled-coil protein 2...    30   4.9  
sp|Q96MG2|JSPR1_HUMAN Junctional sarcoplasmic reticulum protein ...    30   4.9  

>sp|Q4WXQ7|NST1_ASPFU Stress response protein nst1 OS=Aspergillus
           fumigatus GN=nst1 PE=3 SV=1
          Length = 1153

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 75  GDGLHAHLRQPLPGAPCSAHGL*LPSDLAHVCGM 176
           G GLHA L QP P  P S  G  +P   + V G+
Sbjct: 768 GQGLHAMLHQPQPSTPLSPLGRSIPPGFSSVNGI 801


>sp|A1D731|NST1_NEOFI Stress response protein nst1 OS=Neosartorya
           fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
           GN=nst1 PE=3 SV=1
          Length = 1193

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 75  GDGLHAHLRQPLPGAPCSAHGL*LPSDLAHVCGM 176
           G GLHA L QP P  P S  G  +P   + V G+
Sbjct: 769 GHGLHAMLHQPQPSTPLSPLGRSIPPGFSSVNGI 802


>sp|Q6IQC7|TXD14_DANRE Thioredoxin domain-containing protein 14
           OS=Danio rerio GN=txndc14 PE=2 SV=1
          Length = 307

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = -1

Query: 260 RRPTVPTSRPAYLIPSQTTTENENSTRSHPANMSQIRRQSKTMGRTWRTWQRLAKVSMQA 81
           RRP V     A    S T TE EN  R    N++++ ++SK +G+T    +R +++    
Sbjct: 231 RRPQVDKKGRAV---SWTFTE-ENIIREF--NLNELYQKSKKLGKTKEKLERPSELVFST 284

Query: 80  VPESETADA 54
           VPE E  +A
Sbjct: 285 VPEEEEPEA 293


>sp|Q5XHJ5|RSRC2_XENTR Arginine/serine-rich coiled-coil protein 2
           OS=Xenopus tropicalis GN=rsrc2 PE=2 SV=1
          Length = 409

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -3

Query: 213 SDHNRK*ELHKKPSRKHEPDPKAIKDHGQNM---AHLAEVGEGEHASRPRI*NCRRVEQR 43
           S   R+ E+ +K S+KH PD    +DH   +    + +E GE  H         RR E+R
Sbjct: 65  SKEARRHEVKEKSSKKHRPDDSIDRDHSDKVRERLNSSENGEERH---------RRKEKR 115

Query: 42  S 40
           S
Sbjct: 116 S 116


>sp|Q96MG2|JSPR1_HUMAN Junctional sarcoplasmic reticulum protein 1
           OS=Homo sapiens GN=JSRP1 PE=2 SV=1
          Length = 331

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 193 RTPQEAIPQT*ARSEGNQRPWA 128
           R P+EA+PQ     EG  RPWA
Sbjct: 271 REPREALPQRWESREGGHRPWA 292
tr_hit_id Q17JP3
Definition tr|Q17JP3|Q17JP3_AEDAE Putative uncharacterized protein OS=Aedes aegypti
Align length 62
Score (bit) 36.6
E-value 0.64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944524|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_F16, 5'
         (314 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q17JP3|Q17JP3_AEDAE Putative uncharacterized protein OS=Aedes...    37   0.64 
tr|A7ECT2|A7ECT2_SCLS1 Putative uncharacterized protein OS=Scler...    36   0.84 
tr|A9LZZ6|A9LZZ6_NEIM0 tRNA/rRNA methyltransferase OS=Neisseria ...    35   1.4  
tr|A1KUH1|A1KUH1_NEIMF SpoU methylase family protein OS=Neisseri...    35   1.4  
tr|A1ISE9|A1ISE9_NEIMA SpoU methylase family protein OS=Neisseri...    35   1.4  
tr|B8AF50|B8AF50_ORYSI Putative uncharacterized protein OS=Oryza...    35   1.9  
tr|B6HVL5|B6HVL5_PENCH Pc22g14960 protein OS=Penicillium chrysog...    35   2.5  
tr|Q62J30|Q62J30_BURMA RNA methyltransferase, TrmH family, group...    34   3.2  
tr|Q3JQS9|Q3JQS9_BURP1 RNA methyltransferase, TrmH family, group...    34   3.2  
tr|A5XYM5|A5XYM5_BURMA RNA methyltransferase, TrmH family, group...    34   3.2  
tr|B6HFX9|B6HFX9_PENCH Pc20g10870 protein OS=Penicillium chrysog...    34   3.2  
tr|Q63SS2|Q63SS2_BURPS Putative tRNA/rRNA methyltransferase prot...    33   5.5  
tr|A3NWY6|A3NWY6_BURP0 RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A3NB57|A3NB57_BURP6 RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A3ML51|A3ML51_BURM7 RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A2SAX2|A2SAX2_BURM9 RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A1V5H6|A1V5H6_BURMS RNA methyltransferase, TrmH family, group...    33   5.5  
tr|B7CLV2|B7CLV2_BURPS RNA methyltransferase, TrmH family, group...    33   5.5  
tr|B2H9V5|B2H9V5_BURPS RNA methyltransferase, TrmH family, group...    33   5.5  
tr|B1HKU7|B1HKU7_BURPS RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A9K9F0|A9K9F0_BURMA RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A8KVV6|A8KVV6_BURPS RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A8EC39|A8EC39_BURPS RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A5XH74|A5XH74_BURMA RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A5TJU0|A5TJU0_BURMA RNA methyltransferase, TrmH family, group...    33   5.5  
tr|A4LD65|A4LD65_BURPS RNA methyltransferase, TrmH family, group...    33   5.5  
tr|B3DK08|B3DK08_DANRE Cacna1d protein OS=Danio rerio GN=cacna1d...    33   7.1  
tr|A4HQ92|A4HQ92_LEIBR Putative uncharacterized protein OS=Leish...    33   7.1  
tr|B1XQV8|B1XQV8_SYNP2 Putative uncharacterized protein OS=Synec...    33   9.3  
tr|Q9LAA1|Q9LAA1_STASI Amidase-hexosaminidase OS=Staphylococcus ...    33   9.3  

>tr|Q17JP3|Q17JP3_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL001932 PE=4 SV=1
          Length = 260

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -1

Query: 245 PTSRPAYLIPSQTTTENENSTRSHPANMSQ--IRRQSKTMGRTWRTWQRLAKVSMQAVPE 72
           PTS+  + +PS  T  ++NS R+      Q      SK +GR W T+ RL ++S  ++ E
Sbjct: 144 PTSQERFPVPSDPTKSHDNSIRNSFTKHRQAIFSLLSKEIGRNWSTFGRLMQLSDSSLEE 203

Query: 71  SE 66
            E
Sbjct: 204 IE 205


>tr|A7ECT2|A7ECT2_SCLS1 Putative uncharacterized protein
           OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
           Ss-1) GN=SS1G_03121 PE=4 SV=1
          Length = 779

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 23/87 (26%), Positives = 43/87 (49%)
 Frame = -1

Query: 266 SQRRPTVPTSRPAYLIPSQTTTENENSTRSHPANMSQIRRQSKTMGRTWRTWQRLAKVSM 87
           S++R  + +S+      S+ TT+   +  +H  + + +++Q  +    + TW R + VS 
Sbjct: 4   SRKRSKLDSSKEQSTNSSKDTTDQGVTPPNHVQHAAAVKKQLGSRASWYGTWLRKSTVST 63

Query: 86  QAVPESETADAWSREARA*ELPSRDSR 6
           Q V E+ +AD  S    A E+   D R
Sbjct: 64  QVVRETISADKTSNGNMATEINHYDQR 90


>tr|A9LZZ6|A9LZZ6_NEIM0 tRNA/rRNA methyltransferase OS=Neisseria
           meningitidis serogroup C (strain 053442) GN=NMCC_1260
           PE=4 SV=1
          Length = 292

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = -1

Query: 281 YLIYNSQRRPTVPTSRPAYLIPSQTTTENENSTR-SHPANMSQIRRQSKTMGRTWRTWQR 105
           Y +++S R+P + T +PA  +P+         TR SHPAN+    R  KTMG    T   
Sbjct: 11  YTLFHSDRKPNMTTLKPA--LPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT--- 65

Query: 104 LAKVSMQAVPESETADAWSRE 42
           +   ++ A P +E    +  E
Sbjct: 66  IVAPNLMATPMTENPPVFDPE 86


>tr|A1KUH1|A1KUH1_NEIMF SpoU methylase family protein OS=Neisseria
           meningitidis serogroup C / serotype 2a (strain ATCC
           700532 / FAM18) GN=NMC1284 PE=4 SV=1
          Length = 292

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = -1

Query: 281 YLIYNSQRRPTVPTSRPAYLIPSQTTTENENSTR-SHPANMSQIRRQSKTMGRTWRTWQR 105
           Y +++S R+P + T +PA  +P+         TR SHPAN+    R  KTMG    T   
Sbjct: 11  YTLFHSDRKPNMTTLKPA--LPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT--- 65

Query: 104 LAKVSMQAVPESETADAWSRE 42
           +   ++ A P +E    +  E
Sbjct: 66  IVAPNLMATPMTENPPVFDPE 86


>tr|A1ISE9|A1ISE9_NEIMA SpoU methylase family protein OS=Neisseria
           meningitidis serogroup A GN=NMA1560 PE=4 SV=1
          Length = 292

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = -1

Query: 281 YLIYNSQRRPTVPTSRPAYLIPSQTTTENENSTR-SHPANMSQIRRQSKTMGRTWRTWQR 105
           Y +++S R+P + T +PA  +P+         TR SHPAN+    R  KTMG    T   
Sbjct: 11  YTLFHSDRKPNMTTLKPA--LPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT--- 65

Query: 104 LAKVSMQAVPESETADAWSRE 42
           +   ++ A P +E    +  E
Sbjct: 66  IVAPNLMATPMTENPPVFDPE 86


>tr|B8AF50|B8AF50_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09506 PE=4 SV=1
          Length = 239

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 296 EEEEQYLIYNSQRRPTVPTSRPAYLIPSQTTTENENSTRSHPANMSQIRRQSKTMGRT-- 123
           +++  YL      +PT P  R +   P  + T++ N    HP+++ Q R     +G    
Sbjct: 107 DKDMDYLAIIEYHKPTKPRVRHSR--PWSSCTKSSNRGNFHPSSILQTRVNLTRLGTPTL 164

Query: 122 WRTWQRLAKVSMQAVPESE 66
           WR W+    VSM   P  E
Sbjct: 165 WRYWKHFNLVSMNPDPSKE 183


>tr|B6HVL5|B6HVL5_PENCH Pc22g14960 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc22g14960 PE=4 SV=1
          Length = 1780

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
 Frame = -1

Query: 314 TYPTHAEEEEQYLIYNSQRRPTVPTSRPAY----LIPSQTTTENENSTRSHPANMSQIRR 147
           TY +H+E+++    Y+    P++PTS  +Y    L  SQ    +  ST   P   + IR 
Sbjct: 675 TYSSHSEQQDDLDSYSQYNHPSLPTSAESYGDALLSSSQVPRSSSLSTPIGPRTDAPIRS 734

Query: 146 QSKTMGRTWRTWQR--LAKVSMQAVPESETADAWSREARA*ELPS 18
           ++      +R  Q+  L+++  + +P  + A A    A   +LPS
Sbjct: 735 KTDADRLRYRQQQQELLSQLQQKHLPHIDPAAA--AAAMTLDLPS 777


>tr|Q62J30|Q62J30_BURMA RNA methyltransferase, TrmH family, group 1
           OS=Burkholderia mallei GN=BMA1663 PE=3 SV=1
          Length = 306

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 275 IYNSQRRPTVPTSRPAYLIPSQTTTENENSTR------SHPANMSQIRRQSKTMG 129
           +  SQ++P+ P S  A   P++T      STR      SHP N+    R  KTMG
Sbjct: 3   VLESQQKPSAPPSGAATSRPARTARGGFTSTRFVLVEPSHPGNVGAAARALKTMG 57


>tr|Q3JQS9|Q3JQS9_BURP1 RNA methyltransferase, TrmH family, group 1
           OS=Burkholderia pseudomallei (strain 1710b) GN=lasT PE=3
           SV=1
          Length = 346

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 275 IYNSQRRPTVPTSRPAYLIPSQTTTENENSTR------SHPANMSQIRRQSKTMG 129
           +  SQ++P+ P S  A   P++T      STR      SHP N+    R  KTMG
Sbjct: 35  VLESQQKPSAPPSGAATSRPARTARGGFTSTRFVLVEPSHPGNVGAAARALKTMG 89


>tr|A5XYM5|A5XYM5_BURMA RNA methyltransferase, TrmH family, group 1
           OS=Burkholderia mallei JHU GN=BMAJHU_A0068 PE=3 SV=1
          Length = 306

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 275 IYNSQRRPTVPTSRPAYLIPSQTTTENENSTR------SHPANMSQIRRQSKTMG 129
           +  SQ++P+ P S  A   P++T      STR      SHP N+    R  KTMG
Sbjct: 3   VLESQQKPSAPPSGAATSRPARTARGGFTSTRFVLVEPSHPGNVGAAARALKTMG 57