DK944526 |
Clone id |
YMU02A01NGRL0006_F21 |
Library |
YMU02 |
Length |
576 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_F21. 5' end sequence. |
Accession |
DK944526 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL840Contig1 |
Sequence |
TAGCTCAGCTTGCTACTTGCTCCTAAGCCTCGCACAGATTGCGCTCTAATTAAGCTGTTA ACTCTGCTAACTACTACTAAATCTTGCACAGCTTGCGCTAATTAGGCTTGCAATCTGCTT CTCCGAGCTACTGAATATGGGATCCCTCATGGCGGGCTGGAATTCTCCCACTCTCAACAG CAAGCAAGGGGGTTATGCCAGAAGCTCATCGTTTACAAAGTACGAAATAGAGGAATTTAA GAACAAACAGAAACTTGCAGAGGAGGAGCACCACAAGGCCGCTGTGCTTCTTGCTGCAGA GCTCACGCAAGCTCACCAGGATATAAGCATTAAGGTGGATCAGAGAAAAAAGGCAGTCCA GGCCGATGGTGGGGAGCCGTCGAGTGCACCCCTCTCAGTTGAGGAGGAGCTTGAGAGACT GAACTCCTTTAAAGACTGGTGGACGAAAAGCAGCTGGGCATTCTTGAACGATCCCGCGAT GAAGCGAATGGAAGCTGCGAATCACAAATATAAGGCTCAGTTTCATGTTGCTGCTCCTGC TTCTCCTCCCAAAAGCCATTAGAGCTTTCAATATAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q17RM4 |
Definition |
sp|Q17RM4|CC142_HUMAN Coiled-coil domain-containing protein 142 OS=Homo sapiens |
Align length |
62 |
Score (bit) |
32.0 |
E-value |
2.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NLH4 |
Definition |
tr|A9NLH4|A9NLH4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
159 |
Score (bit) |
97.1 |
E-value |
6.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944526|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_F21, 5' (576 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NLH4|A9NLH4_PICSI Putative uncharacterized protein OS=Picea... 97 6e-19 tr|A7NTA8|A7NTA8_VITVI Chromosome chr18 scaffold_1, whole genome... 81 5e-14 tr|A9P036|A9P036_PICSI Putative uncharacterized protein OS=Picea... 79 2e-13 tr|A9NTS3|A9NTS3_PICSI Putative uncharacterized protein OS=Picea... 79 2e-13 tr|A9TAF8|A9TAF8_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|Q94GF4|Q94GF4_ORYSA Putative uncharacterized protein OJ1111_B... 61 4e-08 tr|Q10B90|Q10B90_ORYSJ Os03g0826800 protein OS=Oryza sativa subs... 61 4e-08 tr|A2XNK6|A2XNK6_ORYSI Putative uncharacterized protein OS=Oryza... 61 4e-08 tr|B4YYB7|B4YYB7_THEHA ST225 OS=Thellungiella halophila PE=4 SV=1 60 9e-08 tr|Q93WK6|Q93WK6_ARATH Putative uncharacterized protein At1g1953... 58 3e-07 tr|A9TIZ0|A9TIZ0_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05 tr|A7R3K2|A7R3K2_VITVI Chromosome undetermined scaffold_533, who... 51 5e-05 tr|Q8W1E8|Q8W1E8_ARATH At2g17710/T17A5.17 (Putative uncharacteri... 49 2e-04 tr|Q8LGJ0|Q8LGJ0_ARATH Putative uncharacterized protein OS=Arabi... 49 2e-04 tr|Q9LN41|Q9LN41_ARATH F18O14.29 OS=Arabidopsis thaliana PE=4 SV=1 49 2e-04 tr|B5TV72|B5TV72_CAMSI Putative uncharacterized protein OS=Camel... 48 4e-04 tr|Q7XSQ4|Q7XSQ4_ORYSJ Os04g0560700 protein OS=Oryza sativa subs... 47 0.001 tr|Q01H85|Q01H85_ORYSA B0103C08-B0602B01.18 protein OS=Oryza sat... 47 0.001 tr|A2XWE4|A2XWE4_ORYSI Putative uncharacterized protein OS=Oryza... 47 0.001 tr|B4FC09|B4FC09_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.005 tr|B6WGM4|B6WGM4_9BACE Putative uncharacterized protein OS=Bacte... 40 0.070 tr|Q94GF5|Q94GF5_ORYSA Putative uncharacterized protein OJ1111_B... 39 0.27 tr|Q10B88|Q10B88_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 39 0.27 tr|Q10B87|Q10B87_ORYSJ Expressed protein (Putative uncharacteriz... 39 0.27 tr|A7Y7N2|A7Y7N2_PRUDU Putative uncharacterized protein (Fragmen... 39 0.27 tr|A2XNK7|A2XNK7_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.27 tr|Q10B89|Q10B89_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 36 1.7 tr|Q01AU0|Q01AU0_OSTTA Chromosome 04 contig 1, DNA sequence OS=O... 36 1.7 tr|A4U0E7|A4U0E7_9PROT Membrane protein OS=Magnetospirillum gryp... 35 2.3 tr|B4JGP4|B4JGP4_DROGR GH18884 OS=Drosophila grimshawi GN=GH1888... 35 2.3
>tr|A9NLH4|A9NLH4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 159
Score = 97.1 bits (240), Expect = 6e-19 Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 28/159 (17%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYARSSSFTKYEIEEFKNKQKLAEEEHHKAAVLLAAELTQAH 316 MGSLMAGW+SPT +S +G + R+ S T EIE F ++ A+EEH KA A+ A Sbjct: 1 MGSLMAGWDSPTSSSGKGRFERNKSLTNEEIEAFWKIKRKAQEEHLKAVAQAQAQ-GHAT 59
Query: 317 QDISIKVDQ---------------RKKAVQADGGEPSSAPLS-------------VEEEL 412 D I D RK A G +S S +++L Sbjct: 60 SDFQIPTDNNIEVSETALSSGAIHRKLAANRPVGLDTSRSFSGYDTSPVAADSQFAKDDL 119
Query: 413 ERLNSFKDWWTKSSWAFLNDPAMKRMEAANHKYKAQFHV 529 + L + K WWT+S+WAFLN+P + ME + HKY AQ+HV Sbjct: 120 DNLRNAKAWWTRSNWAFLNEPPLMAMEGSAHKYAAQYHV 158
>tr|A7NTA8|A7NTA8_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014595001 PE=4 SV=1 Length = 147
Score = 80.9 bits (198), Expect = 5e-14 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 12/139 (8%) Frame = +2
Query: 149 MAGWNSPTLNSKQGGYARSSSFTKYEIEEFKNKQKLAEEEHHKAAVLLAAELTQAHQDIS 328 MAGW+S + K Y R+ SFTK EI+ + +K EEEH KA ++ + Q+ + Sbjct: 1 MAGWDSRVRDPKAETYQRNRSFTKGEIDAYWRTKKKIEEEHLKAI----SDTSDGSQEST 56
Query: 329 IKVDQRKKAVQADGGEPSSAPLSVEEE------------LERLNSFKDWWTKSSWAFLND 472 K + +Q SS PL+ +E LE+L WWT+S+WA+LN+ Sbjct: 57 FKEESAGIKLQRS----SSLPLANTKERFMENIIETGTDLEKLLQKNGWWTRSNWAYLNE 112
Query: 473 PAMKRMEAANHKYKAQFHV 529 P + E A+HK+ AQFHV Sbjct: 113 PPVIGPEGASHKFAAQFHV 131
>tr|A9P036|A9P036_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 152
Score = 78.6 bits (192), Expect = 2e-13 Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 2/133 (1%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYARSSSFTKYEIEEFKNKQKLAEEEHHKAAVLLAAELTQAH 316 MGSLMAGW+SP ++KQ ++S T+ EI + +++ EEEH +A AA + Sbjct: 1 MGSLMAGWDSPIRDAKQVRLHFNNSMTREEIANYWRAKRIIEEEHLLSAFKSAARIKA-- 58
Query: 317 QDISIKVDQRKKAVQADGGEPSSAPLSVEEELERLNSFKDWWTKSSWAFLNDPAMKRMEA 496 + + + +R + A+ +P S ++E R+ KDWWTKS++A+LN P + +E Sbjct: 59 RTFTAEDYKRFEDSLAEDEKPQMKNTSYKDEETRI-GIKDWWTKSNYAYLNQPPLTTIEP 117
Query: 497 ANHKYK--AQFHV 529 A KYK AQF + Sbjct: 118 AKPKYKYTAQFDI 130
>tr|A9NTS3|A9NTS3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 152
Score = 78.6 bits (192), Expect = 2e-13 Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 2/133 (1%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYARSSSFTKYEIEEFKNKQKLAEEEHHKAAVLLAAELTQAH 316 MGSLMAGW+SP ++KQ ++S T+ EI + +++ EEEH +A AA + Sbjct: 1 MGSLMAGWDSPIRDAKQVRLHFNNSMTREEIANYWRAKRIIEEEHLLSAFKSAARIKA-- 58
Query: 317 QDISIKVDQRKKAVQADGGEPSSAPLSVEEELERLNSFKDWWTKSSWAFLNDPAMKRMEA 496 + + + +R + A+ +P S ++E R+ KDWWTKS++A+LN P + +E Sbjct: 59 RTFTAEDYKRFEDSLAEDEKPQMKNTSYKDEETRI-GIKDWWTKSNYAYLNQPPLTTIEP 117
Query: 497 ANHKYK--AQFHV 529 A KYK AQF + Sbjct: 118 AKPKYKYTAQFDI 130
>tr|A9TAF8|A9TAF8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107759 PE=4 SV=1 Length = 125
Score = 65.5 bits (158), Expect = 2e-09 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 2/133 (1%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYARSSSFTKYEIEEFKNKQKLAEEEHHKAAVLLAAELTQAH 316 MGSLMAGW++ N ++ +S TK +IEE+ K++ A EEH + A Sbjct: 1 MGSLMAGWDNNPWNEEKVLTRSRTSLTKEKIEEYWRKRQQAMEEHLREA----------- 49
Query: 317 QDISIKVDQRKKAVQADGGEPS-SAPLSVEEELE-RLNSFKDWWTKSSWAFLNDPAMKRM 490 + A G+P+ P +V EE+E + DWW +S+WAFLN P K + Sbjct: 50 -----SAQKSPNESGATSGKPNIDIPQTVVEEVELPMAMSPDWWMRSNWAFLNCPPEKVV 104
Query: 491 EAANHKYKAQFHV 529 + + Y AQ+ V Sbjct: 105 VSNHSTYTAQYEV 117
>tr|Q94GF4|Q94GF4_ORYSA Putative uncharacterized protein OJ1111_B11.6 (Putative uncharacterized protein OSJNBa0010E04.8) OS=Oryza sativa GN=OJ1111_B11.6 PE=4 SV=1 Length = 143
Score = 61.2 bits (147), Expect = 4e-08 Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYAR-SSSFTKYEIEEFKNKQ--------KLAEEEHHKAAVL 289 MGSLMAGW+SP L + AR + S T+ E+E F + L A Sbjct: 1 MGSLMAGWDSPVLGDENRVLARRNKSLTREEVEAFWKQHGGEMMSGSPLGSPAAGGMARS 60
Query: 290 LAAELTQAHQDISIKVDQRKKAVQADGGEPSSAPLSVEEELERLNSFKDWWTKSSWAFLN 469 ++AH S + + A + +G P + E + DWWT+S+WAFLN Sbjct: 61 APVSRSKAHAS-SPRGGRIDPATRVEGFFPHDDAAAAESP----SKSHDWWTRSNWAFLN 115
Query: 470 DPAMKRMEAANHKYKAQFHV 529 +P + + Y QFHV Sbjct: 116 EPPQEEIAGKAQNYAPQFHV 135
>tr|Q10B90|Q10B90_ORYSJ Os03g0826800 protein OS=Oryza sativa subsp. japonica GN=Os03g0826800 PE=2 SV=1 Length = 143
Score = 61.2 bits (147), Expect = 4e-08 Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYAR-SSSFTKYEIEEFKNKQ--------KLAEEEHHKAAVL 289 MGSLMAGW+SP L + AR + S T+ E+E F + L A Sbjct: 1 MGSLMAGWDSPVLGDENRVLARRNKSLTREEVEAFWKQHGGEMMSGSPLGSPAAGGMARS 60
Query: 290 LAAELTQAHQDISIKVDQRKKAVQADGGEPSSAPLSVEEELERLNSFKDWWTKSSWAFLN 469 ++AH S + + A + +G P + E + DWWT+S+WAFLN Sbjct: 61 APVSRSKAHAS-SPRGGRIDPATRVEGFFPHDDAAAAESP----SKSHDWWTRSNWAFLN 115
Query: 470 DPAMKRMEAANHKYKAQFHV 529 +P + + Y QFHV Sbjct: 116 EPPQEEIAGKAQNYAPQFHV 135
>tr|A2XNK6|A2XNK6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14150 PE=4 SV=1 Length = 143
Score = 61.2 bits (147), Expect = 4e-08 Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYAR-SSSFTKYEIEEFKNKQ--------KLAEEEHHKAAVL 289 MGSLMAGW+SP L + AR + S T+ E+E F + L A Sbjct: 1 MGSLMAGWDSPVLGDENRVLARRNKSLTREEVEAFWKQHGGEMMSGSPLGSPAAAGMARS 60
Query: 290 LAAELTQAHQDISIKVDQRKKAVQADGGEPSSAPLSVEEELERLNSFKDWWTKSSWAFLN 469 ++AH S + + A + +G P + E + DWWT+S+WAFLN Sbjct: 61 APVSRSKAHAS-SPRGGRIDPATRVEGFFPHDDAAAAESP----SKSHDWWTRSNWAFLN 115
Query: 470 DPAMKRMEAANHKYKAQFHV 529 +P + + Y QFHV Sbjct: 116 EPPQEEIAGKAQSYAPQFHV 135
>tr|B4YYB7|B4YYB7_THEHA ST225 OS=Thellungiella halophila PE=4 SV=1 Length = 116
Score = 60.1 bits (144), Expect = 9e-08 Identities = 39/131 (29%), Positives = 60/131 (45%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYARSSSFTKYEIEEFKNKQKLAEEEHHKAAVLLAAELTQAH 316 MGSLM+GW+SP + R S T+ +I+ F ++K EEEH +A L + Sbjct: 1 MGSLMSGWDSPPADPNS--VKRCKSLTREDIDAFWKEKKKNEEEHVQAISKLVVQEVAES 58
Query: 317 QDISIKVDQRKKAVQADGGEPSSAPLSVEEELERLNSFKDWWTKSSWAFLNDPAMKRMEA 496 Q K++ ++ E + WW +S+WAFLN+P + E Sbjct: 59 QAQEEKIE--------------------DDPYENQSKKSGWWQRSTWAFLNEP--REEEG 96
Query: 497 ANHKYKAQFHV 529 +KY +QF V Sbjct: 97 RPNKYVSQFKV 107
>tr|Q93WK6|Q93WK6_ARATH Putative uncharacterized protein At1g19530 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g19530 PE=2 SV=1 Length = 117
Score = 58.2 bits (139), Expect = 3e-07 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Frame = +2
Query: 137 MGSLMAGWNSPTLNSKQGGYARSSSFTKYEIEEF-KNKQKLAEEEHHKAAVLLAAELTQA 313 MGSLM+GW+S + K R S T+ EI+ F K K+K EEEH +A L + Sbjct: 1 MGSLMSGWDSRVRDPKS--VRRCKSLTREEIDTFWKTKKKNEEEEHVQAFSKLVTQ---- 54
Query: 314 HQDISIKVDQRKKAVQADGGEPSSAPLSVEEELERLNSFKDWWTKSSWAFLNDPAMKRME 493 + Q+ E S V++ E + WW K+ WAFLN+P + E Sbjct: 55 ------------EGAQSQAKEKKS----VDDLFENQSKSSGWWRKTYWAFLNEP--REEE 96
Query: 494 AANHKYKAQFHV 529 + Y +QF V Sbjct: 97 GRPNNYVSQFKV 108
|