DK944529 |
Clone id |
YMU02A01NGRL0006_G01 |
Library |
YMU02 |
Length |
503 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_G01. 5' end sequence. |
Accession |
DK944529 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GCAATGTGGCTCTCCTGCGTCTTCACCCGCGTGGTCTGCTTTGCATCATGACAAACGTGA TCTTTGACGATTGATATGGTAGCTCCCCCATCCCCTGCTCCGTGCAATGAACTGGAGTCC CAATGCTCGGATAAATGGCCTGTGCGAGAGAACATGCCCTGCCCTTCTACAGCACAGGGC TCTACATCAGCCTTTCCAGATCCACAAGTGCACGGCTCTTCATTGGCTCAGAAAGTCGCA GGAGACAGTGATGCGCATGAATGCACAACCTTGATTGGCAGTGAAGTCTGCAATGAGGCT TGCAATGTTGGCTGCGGCGGAAACACCATTGATGACACATCTCAATTGTATGGTCAGATC CCTGTACACAGTCAGCGCATTTGCAAGCTTCCAGAAGCAGCATTCATGTCGAGTTCTCAC CATGTAGCTGGTAGCACCAGCGGAGGCGCATATGCCCCAACAGAGGGTCCTTTGACTGGT GTGATGTCAATATGTGGTATGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O43900 |
Definition |
sp|O43900|PRIC3_HUMAN Prickle-like protein 3 OS=Homo sapiens |
Align length |
39 |
Score (bit) |
33.5 |
E-value |
0.58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4MQC9 |
Definition |
tr|B4MQC9|B4MQC9_DROWI GK21441 OS=Drosophila willistoni |
Align length |
58 |
Score (bit) |
36.2 |
E-value |
0.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944529|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_G01, 5' (503 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4MQC9|B4MQC9_DROWI GK21441 OS=Drosophila willistoni GN=GK214... 36 0.90 tr|Q9ESP3|Q9ESP3_RAT Mucin (Fragment) OS=Rattus norvegicus GN=Mu... 36 1.2 tr|Q6ZT51|Q6ZT51_HUMAN cDNA FLJ44954 fis, clone BRAWH2010364 OS=... 35 1.5 tr|Q2G3U0|Q2G3U0_NOVAD Methyl-accepting chemotaxis sensory trans... 35 2.0 tr|Q8NBE9|Q8NBE9_HUMAN cDNA FLJ33328 fis, clone BRACE1000051, we... 35 2.0 tr|Q80Z21|Q80Z21_MOUSE Secreted gel-forming mucin (Fragment) OS=... 35 2.6 tr|B6KK75|B6KK75_TOXGO Forkhead-associated domain-containing pro... 35 2.6 tr|Q1DD93|Q1DD93_MYXXD Putative uncharacterized protein OS=Myxoc... 34 3.4 tr|Q58DN1|Q58DN1_BOVIN LIM domain only 6 OS=Bos taurus GN=LMO6 P... 34 3.4 tr|O46131|O46131_LOCMI Lipophorin receptor OS=Locusta migratoria... 34 3.4 tr|B4R3T8|B4R3T8_DROSI GD15486 OS=Drosophila simulans GN=GD15486... 34 3.4 tr|B4ILD4|B4ILD4_DROSE GM11723 OS=Drosophila sechellia GN=GM1172... 34 3.4 tr|Q8FS16|Q8FS16_COREF Putative uncharacterized protein OS=Coryn... 34 4.5 tr|Q5ZVD5|Q5ZVD5_LEGPH Putative uncharacterized protein OS=Legio... 34 4.5 tr|Q5X558|Q5X558_LEGPA Putative uncharacterized protein OS=Legio... 34 4.5 tr|Q5WWD2|Q5WWD2_LEGPL Putative uncharacterized protein OS=Legio... 34 4.5 tr|A9F180|A9F180_SORC5 Putative uncharacterized protein OS=Soran... 34 4.5 tr|A5V1G8|A5V1G8_ROSS1 Putative uncharacterized protein OS=Rosei... 34 4.5 tr|A5IBZ9|A5IBZ9_LEGPC Putative uncharacterized protein OS=Legio... 34 4.5 tr|Q16SX9|Q16SX9_AEDAE Huntingtin interacting protein (Fragment)... 34 4.5 tr|Q16FX7|Q16FX7_AEDAE Huntingtin interacting protein (Fragment)... 34 4.5 tr|Q5DLW0|Q5DLW0_9VIRU ORF-2 OS=Sea perch iridovirus PE=4 SV=1 33 5.8 tr|Q5U2Q0|Q5U2Q0_RAT Prickle homolog 3 (Drosophila) OS=Rattus no... 33 5.8 tr|Q7PS35|Q7PS35_ANOGA AGAP000331-PA (Fragment) OS=Anopheles gam... 33 5.8 tr|Q5CT42|Q5CT42_CRYPV Signal peptide, predicted secreted protei... 33 5.8 tr|B4MVN4|B4MVN4_DROWI GK15025 OS=Drosophila willistoni GN=GK150... 33 5.8 tr|B4KEL8|B4KEL8_DROMO GI17397 OS=Drosophila mojavensis GN=GI173... 33 5.8 tr|Q6IAE4|Q6IAE4_HUMAN LMO6 protein OS=Homo sapiens GN=LMO6 PE=2... 33 5.8 tr|Q53XR5|Q53XR5_HUMAN LIM domain only 6 OS=Homo sapiens GN=LMO6... 33 5.8 tr|B7Z8F2|B7Z8F2_HUMAN cDNA FLJ50430, highly similar to LIM doma... 33 5.8
>tr|B4MQC9|B4MQC9_DROWI GK21441 OS=Drosophila willistoni GN=GK21441 PE=4 SV=1 Length = 153
Score = 36.2 bits (82), Expect = 0.90 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -2
Query: 454 HMRLRWCYQLHGENST*ML--LLEACKCADCVQGSDHTIEMCHQWCFRRSQHCKPHCR 287 H R+R + H +T +L LL C C CV + C WC+R SQ+C P+C+ Sbjct: 96 HARVRVTVERHATCNTWLLAGLLCLCFCWPCV-----CLPCCCNWCYRTSQYC-PNCK 147
>tr|Q9ESP3|Q9ESP3_RAT Mucin (Fragment) OS=Rattus norvegicus GN=Muc5ac PE=2 SV=1 Length = 1851
Score = 35.8 bits (81), Expect = 1.2 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Frame = +1
Query: 202 PQVHGSSLAQKVAGDSDAHECTTLIGSEVCNEACNVGC---GGNTIDDTSQLYGQIPVHS 372 PQ ++ + G C+ S+VC + C GC G +DD++Q G +PV S Sbjct: 338 PQTCLLNMEYQECGSPCVDTCSNPQHSQVCEDHCVAGCFCPEGMVLDDSNQT-GCVPV-S 395
Query: 373 QRICKLPEAAFMSSSHHVAGST----SGGAYAPTEGPLTGVMSICG 498 Q C + + + T SGG ++ E P +G S+ G Sbjct: 396 QCACLYNGTLYAPGTSYSTDCTKCTCSGGQWSCQEVPCSGTCSVMG 441
>tr|Q6ZT51|Q6ZT51_HUMAN cDNA FLJ44954 fis, clone BRAWH2010364 OS=Homo sapiens PE=2 SV=1 Length = 247
Score = 35.4 bits (80), Expect = 1.5 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 2/71 (2%) Frame = -2
Query: 451 MRLRWCYQLHGENST*MLLLEAC--KCADCVQGSDHTIEMCHQWCFRRSQHCKPHCRLHC 278 +R C LH + C +C+ C S H C C S HC PHC LHC Sbjct: 84 LRCSPCCSLHCSPCCSLRCSPCCSLRCSPCC--SLHCSPCCSLQC---SLHCSPHCSLHC 138
Query: 277 QSRLCIHAHHC 245 +H C Sbjct: 139 SPCCFLHRSPC 149
>tr|Q2G3U0|Q2G3U0_NOVAD Methyl-accepting chemotaxis sensory transducer OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=Saro_3048 PE=4 SV=1 Length = 601
Score = 35.0 bits (79), Expect = 2.0 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = +1
Query: 217 SSLAQKVAGDSDAHECTTLIGSEVCNEACNVGCGGNTIDDTSQLYGQIPVHSQRI 381 +SLAQ+VAG S+A T + V + V GG IDD Q +I + SQ I Sbjct: 380 ASLAQRVAGSSEA---VTAARAAVGHVGSEVSRGGGVIDDAEQAMDRIEIASQEI 431
>tr|Q8NBE9|Q8NBE9_HUMAN cDNA FLJ33328 fis, clone BRACE1000051, weakly similar to KERATIN, ULTRA HIGH-SULFUR MATRIX PROTEIN OS=Homo sapiens PE=2 SV=1 Length = 353
Score = 35.0 bits (79), Expect = 2.0 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 2/71 (2%) Frame = -2
Query: 451 MRLRWCYQLHGENST*MLLLEAC--KCADCVQGSDHTIEMCHQWCFRRSQHCKPHCRLHC 278 +R C LH + C +C+ C S H C C S HC PHC LHC Sbjct: 84 LRCSPCCSLHCSPCCSLRCSPCCSLRCSPCC--SLHCSPCCSLQC---SLHCSPHCSLHC 138
Query: 277 QSRLCIHAHHC 245 +H C Sbjct: 139 SPCCFLHYSPC 149
>tr|Q80Z21|Q80Z21_MOUSE Secreted gel-forming mucin (Fragment) OS=Mus musculus GN=Muc5ac PE=2 SV=1 Length = 1726
Score = 34.7 bits (78), Expect = 2.6 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 6/99 (6%) Frame = +1
Query: 220 SLAQKVAGDSDAHECTTLIGSEVCNEACNVGC---GGNTIDDTSQLYGQIPVHSQRICKL 390 ++ + G C+ S+VC + C GC G +DD +Q+ G +PV SQ C Sbjct: 340 NMQHQECGSPCVDTCSNPQHSQVCEDHCIAGCFCPEGMVLDDINQM-GCVPV-SQCACLY 397
Query: 391 PEAAFMSSSHHVAGST---SGGAYAPTEGPLTGVMSICG 498 + +++ T SGG ++ + P G S+ G Sbjct: 398 NGTLYAPGTNYSTDCTNTCSGGQWSCQDIPCAGTCSVMG 436
>tr|B6KK75|B6KK75_TOXGO Forkhead-associated domain-containing protein OS=Toxoplasma gondii ME49 GN=TGME49_087980 PE=4 SV=1 Length = 1263
Score = 34.7 bits (78), Expect = 2.6 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = +1
Query: 337 TSQLYGQIPVHSQRICKLPEAAFMSSSHHVAGSTSGGAYAP 459 T+ Y IP H+ +C P A SS H S S GA AP Sbjct: 223 TNGAYHVIPSHASEVCIDPSQAVQRSSSHARSSNSSGAAAP 263
>tr|Q1DD93|Q1DD93_MYXXD Putative uncharacterized protein OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_1120 PE=4 SV=1 Length = 491
Score = 34.3 bits (77), Expect = 3.4 Identities = 25/88 (28%), Positives = 35/88 (39%) Frame = +1
Query: 169 TAQGSTSAFPDPQVHGSSLAQKVAGDSDAHECTTLIGSEVCNEACNVGCGGNTIDDTSQL 348 TA G A P G V D L G EVC G + + ++ +L Sbjct: 146 TAAGGAEA--KPTTRGGVTTVHVDRDMGGSMGYALKGKEVCAFGAIERGGADLLKESVRL 203
Query: 349 YGQIPVHSQRICKLPEAAFMSSSHHVAG 432 G+ P R+ K+P AF+ S + V G Sbjct: 204 VGKAPARDARLGKVPGVAFVVSGNTVVG 231
>tr|Q58DN1|Q58DN1_BOVIN LIM domain only 6 OS=Bos taurus GN=LMO6 PE=2 SV=1 Length = 540
Score = 34.3 bits (77), Expect = 3.4 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = -3
Query: 198 WKG*CRALCCRRAGHVLSHRPFIRALGLQFIARSRGWGSYHINRQRSRLS 49 W R CC R G L RPF+ GL F +R+ GS + SR S Sbjct: 332 WHASERCFCCSRCGRALLGRPFLPRRGLIFCSRACSLGSEPMAPAHSRRS 381
>tr|O46131|O46131_LOCMI Lipophorin receptor OS=Locusta migratoria PE=2 SV=1 Length = 883
Score = 34.3 bits (77), Expect = 3.4 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -2
Query: 373 DCVQGSDHTIEMCHQWCFRRSQHCKPHCRLHCQSRLCIHAH-HC 245 DC GSD + CH + C+P + C++R+CI H HC Sbjct: 280 DCPDGSDEDVSRCH------NMTCRPD-QFQCRNRICIPGHLHC 316
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