DK944534
Clone id YMU02A01NGRL0006_G07
Library
Length 554
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_G07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GAAATACAGCCAGTTTTCATTCATCATACCAAGACCATTGGACAGTAATTACTGCAGGAA
GAAAACAGCAGGTCTGTCGTCTCTTAATGCGAGTAGCGGTGATAAGTCCCAGAGTAAGCA
GCCCCAAGTTAAGAAATCAATTAAGAGAAAGACATTTGAGAGTTTGTTATCCAAGGAGGA
CGATGATGAGCTGGATGGGCGGAAGAAATGGTCTGGGGGCGGTCTTGTTGCAGAAAATTC
CGAGAAGGGATTAGGAATGCCTACTAGCTACAATGGTTCGATCTCCCAGCAAGTTGTCAA
GGGTTCGCTTCCTCCTGAAGAGCTTATGAAAGGACTGTTTTGGTCGAGGCCTAGCAATCC
TGAGCATGCTAGCTCCTCGGGCACATTGGAGCCTCCCAGTACTGTTGGCCAATCAGAGGC
ACTTTTGAAGGAAAACTTGTGATGGTGCTGATGGCAAGAGTTTTCAGCTGGTCGCTTCTT
TTTTGGAGTGGGAAGTGCCCATGTCTGGGTTATCCTGGGTCATTCAATACGTACGAAGTC
TGCCAAATTAATGA
■■Homology search results ■■ -
sp_hit_id Q9WTW5
Definition sp|Q9WTW5|S22A3_MOUSE Solute carrier family 22 member 3 OS=Mus musculus
Align length 66
Score (bit) 32.0
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944534|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G07, 5'
(554 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9WTW5|S22A3_MOUSE Solute carrier family 22 member 3 OS=Mus m... 32 2.1
sp|Q9M3G7|ATM_ARATH Serine/threonine-protein kinase ATM OS=Arabi... 31 4.6
sp|Q63014|AKAP8_RAT A-kinase anchor protein 8 OS=Rattus norvegic... 31 4.6
sp|B0JY97|LEUC_MICAN 3-isopropylmalate dehydratase large subunit... 30 7.9

>sp|Q9WTW5|S22A3_MOUSE Solute carrier family 22 member 3 OS=Mus
musculus GN=Slc22a3 PE=2 SV=1
Length = 551

Score = 32.0 bits (71), Expect = 2.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3

Query: 507 QTWALPTPKKKRPAENSCHQHHHKFSFKSASDWPTVLGGSNVPEELACSGLLGL-DQNSP 331
+ W L TP+ PAE H H++ +L +N EL+C L ++++P
Sbjct: 69 EEWNLTTPELHVPAERRGQGHCHRY----------LLEATNTSSELSCDPLTAFPNRSAP 118

Query: 330 FISSSG 313
+S SG
Sbjct: 119 LVSCSG 124


>sp|Q9M3G7|ATM_ARATH Serine/threonine-protein kinase ATM
OS=Arabidopsis thaliana GN=ATM PE=2 SV=1
Length = 3856

Score = 30.8 bits (68), Expect = 4.6
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3

Query: 513 ITQTWALPTPKKKRPAENSCHQHHHKFSF-KSASDWPTVLGGSNVPEELACSGLLGLDQN 337
+ Q +P P + SC + F F + SD TV+ G N P+ + C G G Q
Sbjct: 3467 VKQLELVPVVTATIPVDRSCQYNEGSFPFFRGLSDSVTVMNGINAPKVVECFGSDG--QK 3524

Query: 336 SPFISSSGGSE 304
++ SG +
Sbjct: 3525 YKQLAKSGNDD 3535


>sp|Q63014|AKAP8_RAT A-kinase anchor protein 8 OS=Rattus norvegicus
GN=Akap8 PE=2 SV=1
Length = 687

Score = 30.8 bits (68), Expect = 4.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3

Query: 342 QNSPFISSSGGSEPLTTCW-EIEPL*LVGIPNPFSEFSATRPPPDHF 205
++ PF+ S SEPL+T W E+ + G+ P S RPPP F
Sbjct: 206 RSDPFMPPSASSEPLSTTWSELNYMGGRGLGGP----STNRPPPSLF 248


>sp|B0JY97|LEUC_MICAN 3-isopropylmalate dehydratase large subunit
OS=Microcystis aeruginosa (strain NIES-843) GN=leuC PE=3
SV=1
Length = 466

Score = 30.0 bits (66), Expect = 7.9
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3

Query: 114 VSSPKLRNQLRERHLRVCYPRRTM 185
V+SP+ + LRER L+V +PRRT+
Sbjct: 36 VTSPQAFSMLRERGLKVLFPRRTI 59


tr_hit_id Q8U0L3
Definition tr|Q8U0L3|Q8U0L3_PYRFU Putative uncharacterized protein PF1574 OS=Pyrococcus furiosus
Align length 74
Score (bit) 35.8
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944534|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G07, 5'
(554 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8U0L3|Q8U0L3_PYRFU Putative uncharacterized protein PF1574 O... 36 1.6
tr|A8E9C7|A8E9C7_BURPS Glutamyl-tRNA synthetase OS=Burkholderia ... 35 3.5
tr|Q9FZP6|Q9FZP6_ARATH Emb|CAB87748.1 OS=Arabidopsis thaliana GN... 35 3.5
tr|Q66S90|Q66S90_OIKDI Putative uncharacterized protein OS=Oikop... 34 4.6
tr|A7R4F2|A7R4F2_VITVI Chromosome undetermined scaffold_675, who... 34 6.0
tr|A4I9D1|A4I9D1_LEIIN Putative uncharacterized protein OS=Leish... 33 7.8

>tr|Q8U0L3|Q8U0L3_PYRFU Putative uncharacterized protein PF1574
OS=Pyrococcus furiosus GN=PF1574 PE=4 SV=1
Length = 442

Score = 35.8 bits (81), Expect = 1.6
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2

Query: 197 GRKKWSGGGLVAENSEKGLGMPTSYNGSISQQVVKGSLPPEELMKGLFWSRPSNPEHASS 376
G + WSGGG+ GL +P NG S + + G + L+ G+ + SNP++ +
Sbjct: 322 GVRDWSGGGITI-----GLHVPIIENGKRSLEEIIGEIKHGYLVDGVQGAHSSNPDNGNF 376

Query: 377 SGTLEPPSTVGQSE 418
+ T P + E
Sbjct: 377 AVTANPAYIIENGE 390


>tr|A8E9C7|A8E9C7_BURPS Glutamyl-tRNA synthetase OS=Burkholderia
pseudomallei 406e GN=gltX PE=4 SV=1
Length = 240

Score = 34.7 bits (78), Expect = 3.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3

Query: 6 TASFHSSYQDHWTVITAGRKQQVCRLLMRVAVISPRVSSPKLRNQLRERHLRV 164
T++ + S DHWTV R Q+V +L+R +P S+ R Q +R R+
Sbjct: 124 TSTSNISNLDHWTVFNCLRNQEVGNILLRQFGATPETSADMFRTQCFKRFKRL 176


>tr|Q9FZP6|Q9FZP6_ARATH Emb|CAB87748.1 OS=Arabidopsis thaliana
GN=At5g35338 PE=4 SV=1
Length = 155

Score = 34.7 bits (78), Expect = 3.5
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2

Query: 8 SQFSFIIPRPLDSNYCRKKT 67
SQFSF IP+PLD NY +K+T
Sbjct: 117 SQFSFQIPKPLDDNYVKKRT 136


>tr|Q66S90|Q66S90_OIKDI Putative uncharacterized protein
OS=Oikopleura dioica GN=007-06 PE=4 SV=1
Length = 385

Score = 34.3 bits (77), Expect = 4.6
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3

Query: 480 KKRPAENSCH-QHHHKFSFKSASDWPTVLGGSNVPEELACSGLLGLDQNSPFISSSGGSE 304
K +PA CH +HH K SAS W + + P ++ L+GL+ S +
Sbjct: 248 KNQPASVGCHDEHHQKAETLSASGWTAL---PDHPRRISDHSLVGLENQSMLLIGGADYA 304

Query: 303 PLTTCWEIE 277
T W+++
Sbjct: 305 AQTGIWQLK 313


>tr|A7R4F2|A7R4F2_VITVI Chromosome undetermined scaffold_675, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00004362001 PE=4 SV=1
Length = 352

Score = 33.9 bits (76), Expect = 6.0
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2

Query: 8 SQFSFIIPRPLDSNYCRKKTAGLSSLNASSGD 103
SQFSF IP+PL NY RK+ A +NA S D
Sbjct: 234 SQFSFQIPKPLQENYVRKRPA---RVNAGSYD 262


>tr|A4I9D1|A4I9D1_LEIIN Putative uncharacterized protein OS=Leishmania
infantum GN=LinJ33.2700 PE=4 SV=1
Length = 2701

Score = 33.5 bits (75), Expect = 7.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2

Query: 326 MKGLFWSR-----PSNPEHASSSGTLEPPSTVGQSEALLKE 433
+KG+ W PSNP ++S+ T PPST G++ + +E
Sbjct: 903 LKGMVWDSSSSVAPSNPVNSSAQDTSSPPSTSGRTAVMARE 943